RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 TMEM18Q96B42 140 aa11.85□□□□□ -0.51
SCAMP4-213ENST00000621748 ALKBH7Q9BT30 221 aaPredicted RBP11.85□□□□□ -0.51
SCAMP4-213ENST00000621748 COX11Q9Y6N1 276 aa11.85□□□□□ -0.51
SCAMP4-213ENST00000621748 VPS13BQ7Z7G8 4022 aa11.85□□□□□ -0.51
SCAMP4-213ENST00000621748 G0S2P27469 103 aa11.84□□□□□ -0.51
SCAMP4-213ENST00000621748 HAMPP81172 84 aa11.84□□□□□ -0.51
SCAMP4-213ENST00000621748 MPV17L2Q567V2 206 aa11.84□□□□□ -0.51
SCAMP4-213ENST00000621748 RMI2Q96E14 147 aa11.84□□□□□ -0.51
SCAMP4-213ENST00000621748 EPM2AB3EWF7 344 aa11.83□□□□□ -0.52
SCAMP4-213ENST00000621748 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
SCAMP4-213ENST00000621748 FA2HQ7L5A8 372 aa11.83□□□□□ -0.52
SCAMP4-213ENST00000621748 DEFB104AQ8WTQ1 72 aa11.83□□□□□ -0.52
SCAMP4-213ENST00000621748 TRGC2P03986 189 aa11.82□□□□□ -0.52
SCAMP4-213ENST00000621748 RAB5BP61020 215 aa11.82□□□□□ -0.52
SCAMP4-213ENST00000621748 IQCJQ1A5X6 159 aa11.82□□□□□ -0.52
SCAMP4-213ENST00000621748 AMMECR1LQ6DCA0 310 aa11.82□□□□□ -0.52
SCAMP4-213ENST00000621748 Q8N8P6 123 aa11.82□□□□□ -0.52
SCAMP4-213ENST00000621748 FAM30AQ9NZY2 134 aa11.82□□□□□ -0.52
SCAMP4-213ENST00000621748 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.81□□□□□ -0.52
SCAMP4-213ENST00000621748 PRSS47A8MTI9 375 aa11.81□□□□□ -0.52
SCAMP4-213ENST00000621748 K7EMI3 77 aa11.81□□□□□ -0.52
SCAMP4-213ENST00000621748 SMR3BP02814 79 aaPredicted RBP11.81□□□□□ -0.52
SCAMP4-213ENST00000621748 Q0VG73 95 aa11.81□□□□□ -0.52
SCAMP4-213ENST00000621748 Q8N976 141 aa11.81□□□□□ -0.52
SCAMP4-213ENST00000621748 TMEM101Q96IK0 257 aa11.81□□□□□ -0.52
SCAMP4-213ENST00000621748 TSHBP01222 138 aa11.8□□□□□ -0.52
SCAMP4-213ENST00000621748 ANGP03950 147 aaKnown RBP11.8□□□□□ -0.52
SCAMP4-213ENST00000621748 GAGE6Q13070 117 aa11.8□□□□□ -0.52
SCAMP4-213ENST00000621748 ORMDL2Q53FV1 153 aa11.8□□□□□ -0.52
SCAMP4-213ENST00000621748 H7C423 109 aa11.79□□□□□ -0.52
SCAMP4-213ENST00000621748 DGAT2L7PQ6IED9 249 aa11.79□□□□□ -0.52
SCAMP4-213ENST00000621748 IFI27P40305 119 aaPredicted RBP11.78□□□□□ -0.52
SCAMP4-213ENST00000621748 RBX1P62877 108 aa11.78□□□□□ -0.52
SCAMP4-213ENST00000621748 Q5VSD8 79 aa11.78□□□□□ -0.52
SCAMP4-213ENST00000621748 RNASEKQ6P5S7 137 aaKnown RBP11.78□□□□□ -0.52
SCAMP4-213ENST00000621748 BAGE3Q86Y29 109 aa11.78□□□□□ -0.52
SCAMP4-213ENST00000621748 CRPP02741 224 aa11.77□□□□□ -0.53
SCAMP4-213ENST00000621748 LINC01620Q4KN68 170 aa11.77□□□□□ -0.53
SCAMP4-213ENST00000621748 C1orf43Q9BWL3 253 aa11.77□□□□□ -0.53
SCAMP4-213ENST00000621748 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.76□□□□□ -0.53
SCAMP4-213ENST00000621748 IGKV2-29A2NJV5 120 aaPredicted RBP11.76□□□□□ -0.53
SCAMP4-213ENST00000621748 C1orf196B1AJZ1 125 aa11.75□□□□□ -0.53
SCAMP4-213ENST00000621748 Q6ZSA8 131 aa11.75□□□□□ -0.53
SCAMP4-213ENST00000621748 LINC00269Q8N2A0 174 aa11.75□□□□□ -0.53
SCAMP4-213ENST00000621748 C18orf32Q8TCD1 76 aa11.75□□□□□ -0.53
SCAMP4-213ENST00000621748 PRR34Q9NV39 138 aa11.75□□□□□ -0.53
SCAMP4-213ENST00000621748 LINC01549A6NIU2 74 aa11.74□□□□□ -0.53
SCAMP4-213ENST00000621748 LINC00614P0C842 121 aa11.74□□□□□ -0.53
SCAMP4-213ENST00000621748 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
SCAMP4-213ENST00000621748 MIAQ16674 131 aa11.74□□□□□ -0.53
SCAMP4-213ENST00000621748 CLPSL2Q6UWE3 100 aa11.74□□□□□ -0.53
SCAMP4-213ENST00000621748 OR5A1Q8NGJ0 315 aa11.74□□□□□ -0.53
SCAMP4-213ENST00000621748 AP5S1Q9NUS5 200 aa11.74□□□□□ -0.53
SCAMP4-213ENST00000621748 FGF6P10767 208 aa11.73□□□□□ -0.53
SCAMP4-213ENST00000621748 ESDP10768 282 aa11.73□□□□□ -0.53
SCAMP4-213ENST00000621748 C20orf203Q8NBC4 194 aa11.73□□□□□ -0.53
SCAMP4-213ENST00000621748 CYSLTR1Q9Y271 337 aa11.73□□□□□ -0.53
SCAMP4-213ENST00000621748 SRRM2Q9UQ35 2752 aaKnown RBP11.73□□□□□ -0.53
SCAMP4-213ENST00000621748 INAFM2P0DMQ5 153 aa11.72□□□□□ -0.53
SCAMP4-213ENST00000621748 KRTAP26-1Q6PEX3 210 aa11.72□□□□□ -0.53
SCAMP4-213ENST00000621748 A0A1B0GUV1 79 aa11.71□□□□□ -0.53
SCAMP4-213ENST00000621748 FAM229AH3BQW9 127 aa11.71□□□□□ -0.53
SCAMP4-213ENST00000621748 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.53
SCAMP4-213ENST00000621748 IGLV4-60A0A075B6I1 120 aa11.7□□□□□ -0.54
SCAMP4-213ENST00000621748 USP17L23D6RBM5 183 aa11.7□□□□□ -0.54
SCAMP4-213ENST00000621748 HSBP1O75506 76 aa11.7□□□□□ -0.54
SCAMP4-213ENST00000621748 SPANXA1Q9NS26 97 aa11.7□□□□□ -0.54
SCAMP4-213ENST00000621748 REG3AQ06141 175 aa11.69□□□□□ -0.54
SCAMP4-213ENST00000621748 C14orf177Q52M58 125 aa11.69□□□□□ -0.54
SCAMP4-213ENST00000621748 C2orf66Q6UXQ4 117 aa11.69□□□□□ -0.54
SCAMP4-213ENST00000621748 Q6ZN92 141 aa11.69□□□□□ -0.54
SCAMP4-213ENST00000621748 MRPL52Q86TS9 123 aaKnown RBP11.69□□□□□ -0.54
SCAMP4-213ENST00000621748 FLG2Q5D862 2391 aaPredicted RBP11.69□□□□□ -0.54
SCAMP4-213ENST00000621748 PAPPA-AS1Q5QFB9 102 aa11.68□□□□□ -0.54
SCAMP4-213ENST00000621748 TIMM21Q9BVV7 248 aa11.68□□□□□ -0.54
SCAMP4-213ENST00000621748 MYCBP2O75592 4640 aa11.68□□□□□ -0.54
SCAMP4-213ENST00000621748 IGLV10-54A0A075B6I4 117 aa11.67□□□□□ -0.54
SCAMP4-213ENST00000621748 PRSS1P07477 247 aa11.67□□□□□ -0.54
SCAMP4-213ENST00000621748 RPL39P62891 51 aaKnown RBP11.67□□□□□ -0.54
SCAMP4-213ENST00000621748 SCGB3A1Q96QR1 104 aa11.67□□□□□ -0.54
SCAMP4-213ENST00000621748 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
SCAMP4-213ENST00000621748 HBDP02042 147 aa11.66□□□□□ -0.54
SCAMP4-213ENST00000621748 ZNF664Q8N3J9 261 aa11.66□□□□□ -0.54
SCAMP4-213ENST00000621748 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
SCAMP4-213ENST00000621748 CSDC2Q9Y534 153 aaKnown RBP11.66□□□□□ -0.54
SCAMP4-213ENST00000621748 HERC1Q15751 4861 aa11.65□□□□□ -0.54
SCAMP4-213ENST00000621748 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
SCAMP4-213ENST00000621748 SCXQ7RTU7 201 aa11.65□□□□□ -0.54
SCAMP4-213ENST00000621748 TOMM6Q96B49 74 aa11.65□□□□□ -0.54
SCAMP4-213ENST00000621748 TRAV8-4A0A0B4J246 113 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 HIST1H2BKO60814 126 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 HIST1H2BJP06899 126 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 HIST1H2BOP23527 126 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 HIST1H2BBP33778 126 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 HIST1H2BDP58876 126 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 HIST1H2BCP62807 126 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 HIST2H2BEQ16778 126 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 HIST1H2BHQ93079 126 aa11.64□□□□□ -0.55
SCAMP4-213ENST00000621748 TMEM141Q96I45 108 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms