RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TRAV9-1A0A075B6T8 112 aa5.4□□□□□ -1.54
NEK3-209ENST00000618856 IGKV2-29A2NJV5 120 aaPredicted RBP5.4□□□□□ -1.54
NEK3-209ENST00000618856 D6R8Y8 96 aa5.4□□□□□ -1.54
NEK3-209ENST00000618856 UBE2L6O14933 153 aa5.4□□□□□ -1.54
NEK3-209ENST00000618856 TNFRSF6BO95407 300 aa5.4□□□□□ -1.54
NEK3-209ENST00000618856 GCSHP23434 173 aa5.4□□□□□ -1.54
NEK3-209ENST00000618856 CKS2P33552 79 aa5.4□□□□□ -1.54
NEK3-209ENST00000618856 XGP55808 180 aa5.4□□□□□ -1.54
NEK3-209ENST00000618856 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
NEK3-209ENST00000618856 IGLV5-52A0A0A0MRZ9 124 aa5.39□□□□□ -1.55
NEK3-209ENST00000618856 TCAPO15273 167 aa5.39□□□□□ -1.55
NEK3-209ENST00000618856 NPYP01303 97 aa5.39□□□□□ -1.55
NEK3-209ENST00000618856 Q6ZSA8 131 aa5.39□□□□□ -1.55
NEK3-209ENST00000618856 ORMDL3Q8N138 153 aa5.39□□□□□ -1.55
NEK3-209ENST00000618856 TIMM21Q9BVV7 248 aa5.39□□□□□ -1.55
NEK3-209ENST00000618856 SMIM2Q9BVW6 85 aa5.39□□□□□ -1.55
NEK3-209ENST00000618856 CDC42SE2Q9NRR3 84 aa5.39□□□□□ -1.55
NEK3-209ENST00000618856 LAMTOR2Q9Y2Q5 125 aa5.39□□□□□ -1.55
NEK3-209ENST00000618856 C7orf77A4D0Y5 90 aa5.38□□□□□ -1.55
NEK3-209ENST00000618856 LECT2O14960 151 aa5.38□□□□□ -1.55
NEK3-209ENST00000618856 C14orf177Q52M58 125 aa5.38□□□□□ -1.55
NEK3-209ENST00000618856 CLPSL2Q6UWE3 100 aa5.38□□□□□ -1.55
NEK3-209ENST00000618856 TMEM136Q6ZRR5 245 aa5.38□□□□□ -1.55
NEK3-209ENST00000618856 OR5A1Q8NGJ0 315 aa5.38□□□□□ -1.55
NEK3-209ENST00000618856 FAM104AQ969W3 186 aa5.38□□□□□ -1.55
NEK3-209ENST00000618856 KIR2DL4Q99706 377 aa5.38□□□□□ -1.55
NEK3-209ENST00000618856 UBE2D4Q9Y2X8 147 aa5.38□□□□□ -1.55
NEK3-209ENST00000618856 USP17L23D6RBM5 183 aa5.37□□□□□ -1.55
NEK3-209ENST00000618856 PRSS1P07477 247 aa5.37□□□□□ -1.55
NEK3-209ENST00000618856 RHEBQ15382 184 aa5.37□□□□□ -1.55
NEK3-209ENST00000618856 AMMECR1LQ6DCA0 310 aa5.37□□□□□ -1.55
NEK3-209ENST00000618856 ZNF664Q8N3J9 261 aa5.37□□□□□ -1.55
NEK3-209ENST00000618856 CLRN3Q8NCR9 226 aa5.37□□□□□ -1.55
NEK3-209ENST00000618856 PRELID3AQ96N28 172 aa5.37□□□□□ -1.55
NEK3-209ENST00000618856 IGLV10-54A0A075B6I4 117 aa5.36□□□□□ -1.55
NEK3-209ENST00000618856 LINC00959A0A1B0GUT2 108 aa5.36□□□□□ -1.55
NEK3-209ENST00000618856 FCER1GP30273 86 aa5.36□□□□□ -1.55
NEK3-209ENST00000618856 CNBPP62633 177 aaKnown RBP5.36□□□□□ -1.55
NEK3-209ENST00000618856 DGAT2L7PQ6IED9 249 aa5.36□□□□□ -1.55
NEK3-209ENST00000618856 RNASEKQ6P5S7 137 aaKnown RBP5.36□□□□□ -1.55
NEK3-209ENST00000618856 Q8N1X5 172 aa5.36□□□□□ -1.55
NEK3-209ENST00000618856 TMEM101Q96IK0 257 aa5.36□□□□□ -1.55
NEK3-209ENST00000618856 FAM30AQ9NZY2 134 aa5.36□□□□□ -1.55
NEK3-209ENST00000618856 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.35□□□□□ -1.55
NEK3-209ENST00000618856 K7EMI3 77 aa5.35□□□□□ -1.55
NEK3-209ENST00000618856 CCL25O15444 150 aa5.35□□□□□ -1.55
NEK3-209ENST00000618856 HLA-DQA1P01909 254 aa5.35□□□□□ -1.55
NEK3-209ENST00000618856 MRPS36P82909 103 aaKnown RBP5.35□□□□□ -1.55
NEK3-209ENST00000618856 SMAGPQ0VAQ4 97 aa5.35□□□□□ -1.55
NEK3-209ENST00000618856 FOXI1Q12951 378 aa5.35□□□□□ -1.55
NEK3-209ENST00000618856 C15orf56Q8N910 161 aa5.35□□□□□ -1.55
NEK3-209ENST00000618856 C9orf163Q8N9P6 203 aa5.35□□□□□ -1.55
NEK3-209ENST00000618856 CHCHD10Q8WYQ3 142 aaPredicted RBP5.35□□□□□ -1.55
NEK3-209ENST00000618856 GNB1LQ9BYB4 327 aa5.35□□□□□ -1.55
NEK3-209ENST00000618856 KRTAP4-5Q9BYR2 181 aa5.35□□□□□ -1.55
NEK3-209ENST00000618856 SRRM2Q9UQ35 2752 aaKnown RBP5.35□□□□□ -1.55
NEK3-209ENST00000618856 GAGE12HA6NDE8 117 aa5.34□□□□□ -1.55
NEK3-209ENST00000618856 LINC01546A6NGU7 62 aa5.34□□□□□ -1.55
NEK3-209ENST00000618856 SLPIP03973 132 aa5.34□□□□□ -1.55
NEK3-209ENST00000618856 Q8N8P6 123 aa5.34□□□□□ -1.55
NEK3-209ENST00000618856 TMEM18Q96B42 140 aa5.34□□□□□ -1.55
NEK3-209ENST00000618856 SPANXA1Q9NS26 97 aa5.34□□□□□ -1.55
NEK3-209ENST00000618856 PYGO1Q9Y3Y4 419 aa5.34□□□□□ -1.55
NEK3-209ENST00000618856 PKHD1L1Q86WI1 4243 aa5.34□□□□□ -1.55
NEK3-209ENST00000618856 GVQW2A0A096LPI5 108 aaPredicted RBP5.33□□□□□ -1.56
NEK3-209ENST00000618856 S100PP25815 95 aa5.33□□□□□ -1.56
NEK3-209ENST00000618856 RPL39P62891 51 aaKnown RBP5.33□□□□□ -1.56
NEK3-209ENST00000618856 COX19Q49B96 90 aa5.33□□□□□ -1.56
NEK3-209ENST00000618856 CD164L2Q6UWJ8 174 aa5.33□□□□□ -1.56
NEK3-209ENST00000618856 YPEL4Q96NS1 127 aa5.33□□□□□ -1.56
NEK3-209ENST00000618856 MAP1LC3AQ9H492 121 aa5.33□□□□□ -1.56
NEK3-209ENST00000618856 MYCBP2O75592 4640 aa5.33□□□□□ -1.56
NEK3-209ENST00000618856 C1orf196B1AJZ1 125 aa5.32□□□□□ -1.56
NEK3-209ENST00000618856 MT-ND6P03923 174 aa5.32□□□□□ -1.56
NEK3-209ENST00000618856 NPSP0C0P6 89 aa5.32□□□□□ -1.56
NEK3-209ENST00000618856 CIRBPQ14011 172 aaKnown RBP5.32□□□□□ -1.56
NEK3-209ENST00000618856 LINC01620Q4KN68 170 aa5.32□□□□□ -1.56
NEK3-209ENST00000618856 CFAP161Q6P656 301 aa5.32□□□□□ -1.56
NEK3-209ENST00000618856 SDIM1Q6ZPB5 146 aa5.32□□□□□ -1.56
NEK3-209ENST00000618856 Q6ZUT4 128 aa5.32□□□□□ -1.56
NEK3-209ENST00000618856 SVBPQ8N300 66 aa5.32□□□□□ -1.56
NEK3-209ENST00000618856 ALKBH7Q9BT30 221 aaPredicted RBP5.32□□□□□ -1.56
NEK3-209ENST00000618856 RPS10P5Q9NQ39 176 aa5.32□□□□□ -1.56
NEK3-209ENST00000618856 IGKV3OR2-268A0A0C4DH90 116 aa5.31□□□□□ -1.56
NEK3-209ENST00000618856 LOC389332A0A1B0GUA5 103 aa5.31□□□□□ -1.56
NEK3-209ENST00000618856 IGIPA6NJ69 53 aa5.31□□□□□ -1.56
NEK3-209ENST00000618856 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
NEK3-209ENST00000618856 SNAPINO95295 136 aa5.31□□□□□ -1.56
NEK3-209ENST00000618856 APOC3P02656 99 aa5.31□□□□□ -1.56
NEK3-209ENST00000618856 RAB5AP20339 215 aa5.31□□□□□ -1.56
NEK3-209ENST00000618856 IFI27P40305 119 aaPredicted RBP5.31□□□□□ -1.56
NEK3-209ENST00000618856 XCL1P47992 114 aa5.31□□□□□ -1.56
NEK3-209ENST00000618856 SS18Q15532 418 aa5.31□□□□□ -1.56
NEK3-209ENST00000618856 ORMDL2Q53FV1 153 aa5.31□□□□□ -1.56
NEK3-209ENST00000618856 KRTAP9-2Q9BYQ4 174 aa5.31□□□□□ -1.56
NEK3-209ENST00000618856 NXT2Q9NPJ8 142 aaKnown RBP5.31□□□□□ -1.56
NEK3-209ENST00000618856 IGLV4-3A0A075B6K6 122 aa5.3□□□□□ -1.56
NEK3-209ENST00000618856 IGHV3OR16-9A0A0B4J2B5 98 aa5.3□□□□□ -1.56
NEK3-209ENST00000618856 IGHV1-58A0A0C4DH39 117 aa5.3□□□□□ -1.56
NEK3-209ENST00000618856 hDV102S1A0JD36 115 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms