RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 RPL39LQ96EH5 51 aaKnown RBP2.34□□□□□ -2.03
LPP-221ENST00000618621 TINCRA0A1B0GVN0 87 aa2.34□□□□□ -2.03
LPP-221ENST00000618621 E7EUB6 86 aa2.34□□□□□ -2.03
LPP-221ENST00000618621 J3KT08 172 aa2.34□□□□□ -2.03
LPP-221ENST00000618621 RNF223E7ERA6 249 aa2.34□□□□□ -2.03
LPP-221ENST00000618621 DAND5Q8N907 189 aa2.34□□□□□ -2.03
LPP-221ENST00000618621 CFHR3Q02985 330 aa2.34□□□□□ -2.03
LPP-221ENST00000618621 IGKV2-30P06310 120 aa2.34□□□□□ -2.03
LPP-221ENST00000618621 NDUFA11Q86Y39 141 aa2.34□□□□□ -2.03
LPP-221ENST00000618621 HHLA3Q9XRX5 114 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 TRBV7-3A0A075B6L6 115 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 COX7A2LO14548 114 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 IGLV6-57P01721 117 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 IGHV4-61A0A0C4DH41 118 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 LY6LH3BQJ8 138 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 C1orf229Q6ZS94 237 aaPredicted RBP2.34□□□□□ -2.04
LPP-221ENST00000618621 X6R8D5 127 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 PRAC2D3DTV9 90 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 IMUPQ9GZP8 106 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 MAPKAPK5-AS1Q8N8E1 139 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 NTN5Q8WTR8 489 aaPredicted RBP2.34□□□□□ -2.04
LPP-221ENST00000618621 C16orf74Q96GX8 76 aa2.34□□□□□ -2.04
LPP-221ENST00000618621 IGHV4OR15-8A0A075B7B6 117 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 A0A087WW49 117 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 C11orf86A6NJI1 115 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 MRPS36P82909 103 aaKnown RBP2.33□□□□□ -2.04
LPP-221ENST00000618621 Q8N1Y9 231 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 CELA1Q9UNI1 258 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 MYCNOSP40205 109 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 FANCD2OSQ96PS1 177 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 XCL1P47992 114 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 DMBT1Q9UGM3 2413 aaPredicted RBP2.33□□□□□ -2.04
LPP-221ENST00000618621 SPRY2O43597 315 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 ANGP03950 147 aaKnown RBP2.33□□□□□ -2.04
LPP-221ENST00000618621 LINC01620Q4KN68 170 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 PPDPFQ9H3Y8 114 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 LINC00167Q96N53 147 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 ITPR3Q14573 2671 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 H7C423 109 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 IGHV3-30-3P0DP02 117 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 PLA2G2DQ9UNK4 145 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 SETXQ7Z333 2677 aaKnown RBP2.33□□□□□ -2.04
LPP-221ENST00000618621 ATOX1O00244 68 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 NEXN-AS1Q8NBZ9 246 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 TTTY13Q9BZ97 58 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 MT-ATP8P03928 68 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 MIAQ16674 131 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 COX7B2Q8TF08 81 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 TP73-AS1Q9UF72 201 aa2.33□□□□□ -2.04
LPP-221ENST00000618621 IGHV3-38A0A0C4DH36 116 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 SND1-IT1Q9HBX3 110 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 TIMM17BO60830 172 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 UNC79Q9P2D8 2635 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 TRAV4A0A0B4J268 109 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 CRYGDP07320 174 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 NREPQ16612 68 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 Q6Q795 121 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 KLK5Q9Y337 293 aaPredicted RBP2.32□□□□□ -2.04
LPP-221ENST00000618621 HILS1P60008 231 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 LINC00483Q53H64 154 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 NFE4Q86UQ8 179 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 NUP210Q8TEM1 1887 aaPredicted RBP2.32□□□□□ -2.04
LPP-221ENST00000618621 IGKV3D-7A0A0C4DH55 119 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 A0A0J9YXV3 536 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 CTSZQ9UBR2 303 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 K7EQD1 137 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 J3QKU1 62 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 FBXL19-AS1Q494R0 122 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 HELZ2Q9BYK8 2649 aaKnown RBP2.32□□□□□ -2.04
LPP-221ENST00000618621 SMIM1B2RUZ4 78 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 BLCAPP62952 87 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 C5orf38Q86SI9 138 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 UBE2D4Q9Y2X8 147 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 IGHV4-4A0A075B6R2 117 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 M0QY20 66 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 IGLV1-47P01700 117 aa2.32□□□□□ -2.04
LPP-221ENST00000618621 TRBV27A0A0K0K1C4 114 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 DEFB112Q30KQ8 113 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 VSIG2Q96IQ7 327 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 IGLV5-45A0A087WSX0 123 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 EBI3Q14213 229 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 PTPRBP23467 1997 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 UNC80Q8N2C7 3258 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 COL4A4P53420 1690 aaPredicted RBP2.31□□□□□ -2.04
LPP-221ENST00000618621 Q6ZUT4 128 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 C19orf84I3L1E1 186 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 TNFRSF13BO14836 293 aaPredicted RBP2.31□□□□□ -2.04
LPP-221ENST00000618621 CXCL6P80162 114 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 Q8NA96 180 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 KIF26AQ9ULI4 1882 aaPredicted RBP2.31□□□□□ -2.04
LPP-221ENST00000618621 TRAV10A0A0B4J240 114 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 IGHV4-28A0A0C4DH34 117 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 TMEM223A0PJW6 202 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 UBE2D1P51668 147 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 SMAD5-AS1Q9Y6J3 95 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 CFAP46Q8IYW2 2715 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 TEP1Q99973 2627 aaKnown RBP2.31□□□□□ -2.04
LPP-221ENST00000618621 IGLC6P0CF74 106 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 PIK3CD-AS1Q5SR53 167 aa2.31□□□□□ -2.04
LPP-221ENST00000618621 DEFB105AQ8NG35 78 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms