RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
SCAMP1-206ENST00000618166 TMA7Q9Y2S6 64 aaKnown RBP3.59□□□□□ -1.83
SCAMP1-206ENST00000618166 BCE1O60756 84 aa3.58□□□□□ -1.84
SCAMP1-206ENST00000618166 ESDP10768 282 aa3.58□□□□□ -1.84
SCAMP1-206ENST00000618166 LGALS3P17931 250 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-206ENST00000618166 DNLZQ5SXM8 178 aa3.58□□□□□ -1.84
SCAMP1-206ENST00000618166 C9orf129Q5T035 196 aaKnown RBP3.58□□□□□ -1.84
SCAMP1-206ENST00000618166 SPAG11AQ6PDA7 123 aa3.58□□□□□ -1.84
SCAMP1-206ENST00000618166 OR2D3Q8NGH3 330 aa3.58□□□□□ -1.84
SCAMP1-206ENST00000618166 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 IGKV2-29A2NJV5 120 aaPredicted RBP3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 G3V3Q6 166 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 SIX6O95475 246 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 CRIP1P50238 77 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 SSTP61278 116 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 IFITM2Q01629 132 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 PPP1R1AQ13522 171 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 RNASEKQ6P5S7 137 aaKnown RBP3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 TCTE3Q8IZS6 198 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 OR10AG1Q8NH19 301 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 DEDD2Q8WXF8 326 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 C2orf48Q96LS8 159 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 NPCDR1Q9BY65 106 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 MED28Q9H204 178 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 MBD2Q9UBB5 411 aa3.57□□□□□ -1.84
SCAMP1-206ENST00000618166 C9orf92A6NGG3 77 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 M0QY20 66 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 SFT2D2O95562 160 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 FAUP35544 74 aaKnown RBP3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 H2BFSP57053 126 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 TAS2R30P59541 319 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 FLI1Q01543 452 aaPredicted RBP3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 AMMECR1LQ6DCA0 310 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 CD164L2Q6UWJ8 174 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 KRTAP13-1Q8IUC0 172 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 THAP6Q8TBB0 222 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 PGLYRP4Q96LB8 373 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 SLC25A21Q9BQT8 299 aaPredicted RBP3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 SMDT1Q9H4I9 107 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 SCP2D1Q9UJQ7 156 aa3.56□□□□□ -1.84
SCAMP1-206ENST00000618166 C9orf170A2RU37 121 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 FABP5P3A8MUU1 101 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 SSNA1O43805 119 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 TCRAP04437 139 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 MALP21145 153 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 SPAG11BQ08648 103 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 TMEM128Q5BJH2 165 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 CT83Q5H943 113 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 Q8N377 158 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 Q8NBF4 154 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 C11orf1Q9H5F2 150 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 C6orf48Q9UBA6 75 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 C22orf24Q9Y442 160 aa3.55□□□□□ -1.84
SCAMP1-206ENST00000618166 TRAV34A0A0B4J273 112 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 PIGBOS1A0A0B4J2F0 54 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 SH2D1AO60880 128 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 TLX1NBP0CAT3 122 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 FAM74A1Q5RGS3 127 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 UNQ6190/PRO20217Q6UXQ8 127 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 C9orf62Q8N4C0 152 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 SCGB3A2Q96PL1 93 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 IMMP2LQ96T52 175 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 MRPL35Q9NZE8 188 aaKnown RBP3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 GSKIPQ9P0R6 139 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 NDUFA12Q9UI09 145 aa3.54□□□□□ -1.84
SCAMP1-206ENST00000618166 COX7A2LO14548 114 aa3.53□□□□□ -1.84
SCAMP1-206ENST00000618166 CTRLP40313 264 aa3.53□□□□□ -1.84
SCAMP1-206ENST00000618166 C5orf38Q86SI9 138 aa3.53□□□□□ -1.84
SCAMP1-206ENST00000618166 ARL2-SNX15V9GYD0 113 aa3.53□□□□□ -1.84
SCAMP1-206ENST00000618166 IGSF23A1L1A6 192 aa3.52□□□□□ -1.85
SCAMP1-206ENST00000618166 MGPP08493 103 aa3.52□□□□□ -1.85
SCAMP1-206ENST00000618166 GIPP09681 153 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-206ENST00000618166 NTF3P20783 257 aa3.52□□□□□ -1.85
SCAMP1-206ENST00000618166 IL15RAQ13261 267 aa3.52□□□□□ -1.85
SCAMP1-206ENST00000618166 COTL1Q14019 142 aa3.52□□□□□ -1.85
SCAMP1-206ENST00000618166 IAH1Q2TAA2 248 aaPredicted RBP3.52□□□□□ -1.85
SCAMP1-206ENST00000618166 LRRC37A5PQ49AS3 106 aa3.52□□□□□ -1.85
SCAMP1-206ENST00000618166 KHDC3LQ587J8 217 aa3.52□□□□□ -1.85
SCAMP1-206ENST00000618166 HSPB11Q9Y547 144 aa3.52□□□□□ -1.85
SCAMP1-206ENST00000618166 RPL37AP8A6NKH3 93 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 FAM25EA8MYX2 175 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 H0YIZ8 118 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 L7N2F9 121 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 MPC2O95563 127 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 UBE2AP49459 152 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 VAMP2P63027 116 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 SAPCD1Q5SSQ6 148 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 Q86TA4 180 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 LSM5Q9Y4Y9 91 aaKnown RBP3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 HMGB3O15347 200 aaKnown RBP3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 PRLHP81277 87 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 PPP1R1CQ8WVI7 109 aa3.51□□□□□ -1.85
SCAMP1-206ENST00000618166 FXYD6-FXYD2A0A087WZ82 144 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 SERTM2A0A1B0GWG4 89 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 HMSDA8MTL9 139 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 K7EQM0 130 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 NDUFA1O15239 70 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 SPINK1P00995 79 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 S100A11P31949 105 aa3.5□□□□□ -1.85
SCAMP1-206ENST00000618166 SULT1A1P50225 295 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms