RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 C20orf203Q8NBC4 194 aa10.03□□□□□ -0.8
UBXN1-218ENST00000616865 EPM2AB3EWF7 344 aa10.02□□□□□ -0.81
UBXN1-218ENST00000616865 ANGP03950 147 aaKnown RBP10.02□□□□□ -0.81
UBXN1-218ENST00000616865 FGF6P10767 208 aa10.02□□□□□ -0.81
UBXN1-218ENST00000616865 Q0VG73 95 aa10.02□□□□□ -0.81
UBXN1-218ENST00000616865 MPV17L2Q567V2 206 aa10.02□□□□□ -0.81
UBXN1-218ENST00000616865 Q6ZRN7 208 aaPredicted RBP10.02□□□□□ -0.81
UBXN1-218ENST00000616865 C10orf126Q8N4M7 172 aa10.02□□□□□ -0.81
UBXN1-218ENST00000616865 CYSLTR1Q9Y271 337 aa10.02□□□□□ -0.81
UBXN1-218ENST00000616865 ZNF25P17030 456 aaPredicted RBP10.01□□□□□ -0.81
UBXN1-218ENST00000616865 RBX1P62877 108 aa10.01□□□□□ -0.81
UBXN1-218ENST00000616865 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
UBXN1-218ENST00000616865 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
UBXN1-218ENST00000616865 K7EP13 123 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST1H2BKO60814 126 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST1H2BJP06899 126 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST1H2BOP23527 126 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST1H2BBP33778 126 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST1H2BDP58876 126 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST1H2BCP62807 126 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 RPL39P62891 51 aaKnown RBP10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST2H2BEQ16778 126 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST2H2BFQ5QNW6 126 aaPredicted RBP10□□□□□ -0.81
UBXN1-218ENST00000616865 C2orf66Q6UXQ4 117 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 Q8N3U1 123 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 Q8N976 141 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST1H2BHQ93079 126 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST1H2BNQ99877 126 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 HIST1H2BMQ99879 126 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 KLK12Q9UKR0 248 aa10□□□□□ -0.81
UBXN1-218ENST00000616865 A0A1B0GUV1 79 aa9.99□□□□□ -0.81
UBXN1-218ENST00000616865 LINC01546A6NGU7 62 aa9.99□□□□□ -0.81
UBXN1-218ENST00000616865 LINC01549A6NIU2 74 aa9.99□□□□□ -0.81
UBXN1-218ENST00000616865 HSBP1O75506 76 aa9.99□□□□□ -0.81
UBXN1-218ENST00000616865 CRPP02741 224 aa9.99□□□□□ -0.81
UBXN1-218ENST00000616865 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
UBXN1-218ENST00000616865 SPANXA1Q9NS26 97 aa9.99□□□□□ -0.81
UBXN1-218ENST00000616865 TIMM21Q9BVV7 248 aa9.98□□□□□ -0.81
UBXN1-218ENST00000616865 PGPEP1Q9NXJ5 209 aa9.98□□□□□ -0.81
UBXN1-218ENST00000616865 IGLV4-60A0A075B6I1 120 aa9.97□□□□□ -0.81
UBXN1-218ENST00000616865 SERF1AO75920 110 aa9.97□□□□□ -0.81
UBXN1-218ENST00000616865 CDPF1Q6NVV7 123 aa9.97□□□□□ -0.81
UBXN1-218ENST00000616865 TOMM6Q96B49 74 aa9.97□□□□□ -0.81
UBXN1-218ENST00000616865 URB1-AS1Q96HZ7 61 aa9.97□□□□□ -0.81
UBXN1-218ENST00000616865 SCGB3A1Q96QR1 104 aa9.97□□□□□ -0.81
UBXN1-218ENST00000616865 UBE2D4Q9Y2X8 147 aa9.97□□□□□ -0.81
UBXN1-218ENST00000616865 EREGO14944 169 aa9.96□□□□□ -0.82
UBXN1-218ENST00000616865 HBDP02042 147 aa9.96□□□□□ -0.82
UBXN1-218ENST00000616865 INAFM2P0DMQ5 153 aa9.96□□□□□ -0.82
UBXN1-218ENST00000616865 FUSP35637 526 aaKnown RBP eCLIP9.96□□□□□ -0.82
UBXN1-218ENST00000616865 XGP55808 180 aa9.96□□□□□ -0.82
UBXN1-218ENST00000616865 NDUFA6P56556 154 aa9.96□□□□□ -0.82
UBXN1-218ENST00000616865 PMCHL1Q16048 86 aa9.96□□□□□ -0.82
UBXN1-218ENST00000616865 CLPSL2Q6UWE3 100 aa9.96□□□□□ -0.82
UBXN1-218ENST00000616865 LINC00269Q8N2A0 174 aa9.96□□□□□ -0.82
UBXN1-218ENST00000616865 UBE2WQ96B02 151 aa9.96□□□□□ -0.82
UBXN1-218ENST00000616865 Q9HAA7 133 aa9.96□□□□□ -0.82
UBXN1-218ENST00000616865 TRAV8-3A0A0A6YYJ7 113 aa9.95□□□□□ -0.82
UBXN1-218ENST00000616865 IGKV3OR2-268A0A0C4DH90 116 aa9.95□□□□□ -0.82
UBXN1-218ENST00000616865 IBA57-AS1B1ANH7 110 aa9.95□□□□□ -0.82
UBXN1-218ENST00000616865 Q5VSD8 79 aa9.95□□□□□ -0.82
UBXN1-218ENST00000616865 Q6ZN92 141 aa9.95□□□□□ -0.82
UBXN1-218ENST00000616865 ZNF664Q8N3J9 261 aa9.95□□□□□ -0.82
UBXN1-218ENST00000616865 PYGO1Q9Y3Y4 419 aa9.95□□□□□ -0.82
UBXN1-218ENST00000616865 CSDC2Q9Y534 153 aaKnown RBP9.95□□□□□ -0.82
UBXN1-218ENST00000616865 MYCBP2O75592 4640 aa9.95□□□□□ -0.82
UBXN1-218ENST00000616865 REG3AQ06141 175 aa9.94□□□□□ -0.82
UBXN1-218ENST00000616865 PAPPA-AS1Q5QFB9 102 aa9.94□□□□□ -0.82
UBXN1-218ENST00000616865 Q6ZUT4 128 aa9.94□□□□□ -0.82
UBXN1-218ENST00000616865 RMI2Q96E14 147 aa9.94□□□□□ -0.82
UBXN1-218ENST00000616865 VPS13BQ7Z7G8 4022 aa9.94□□□□□ -0.82
UBXN1-218ENST00000616865 RNASE13Q5GAN3 156 aaKnown RBP9.93□□□□□ -0.82
UBXN1-218ENST00000616865 ERASQ7Z444 233 aa9.93□□□□□ -0.82
UBXN1-218ENST00000616865 NFE4Q86UQ8 179 aa9.93□□□□□ -0.82
UBXN1-218ENST00000616865 TMEM141Q96I45 108 aa9.93□□□□□ -0.82
UBXN1-218ENST00000616865 CDC42SE2Q9NRR3 84 aa9.93□□□□□ -0.82
UBXN1-218ENST00000616865 DMBT1Q9UGM3 2413 aaPredicted RBP9.92□□□□□ -0.82
UBXN1-218ENST00000616865 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.92□□□□□ -0.82
UBXN1-218ENST00000616865 S100A6P06703 90 aa9.92□□□□□ -0.82
UBXN1-218ENST00000616865 MRPS36P82909 103 aaKnown RBP9.92□□□□□ -0.82
UBXN1-218ENST00000616865 FAM19A2Q8N3H0 131 aa9.92□□□□□ -0.82
UBXN1-218ENST00000616865 TIMM17AQ99595 171 aa9.92□□□□□ -0.82
UBXN1-218ENST00000616865 OPRPNQ99935 248 aaPredicted RBP9.92□□□□□ -0.82
UBXN1-218ENST00000616865 VCX2Q9H322 139 aa9.92□□□□□ -0.82
UBXN1-218ENST00000616865 IGLV4-3A0A075B6K6 122 aa9.91□□□□□ -0.82
UBXN1-218ENST00000616865 IGKV2D-24A0A075B6R9 120 aa9.91□□□□□ -0.82
UBXN1-218ENST00000616865 A0A087WTM6 91 aa9.91□□□□□ -0.82
UBXN1-218ENST00000616865 IFITM10A6NMD0 228 aa9.91□□□□□ -0.82
UBXN1-218ENST00000616865 ATP5LO75964 103 aa9.91□□□□□ -0.82
UBXN1-218ENST00000616865 NPSP0C0P6 89 aa9.91□□□□□ -0.82
UBXN1-218ENST00000616865 MIAQ16674 131 aa9.91□□□□□ -0.82
UBXN1-218ENST00000616865 TEX43Q6ZNM6 134 aa9.91□□□□□ -0.82
UBXN1-218ENST00000616865 C2orf88Q9BSF0 95 aa9.91□□□□□ -0.82
UBXN1-218ENST00000616865 C1orf43Q9BWL3 253 aa9.91□□□□□ -0.82
UBXN1-218ENST00000616865 A0A096LNJ9 63 aa9.9□□□□□ -0.82
UBXN1-218ENST00000616865 IGIPA6NJ69 53 aa9.9□□□□□ -0.82
UBXN1-218ENST00000616865 PSCAO43653 123 aa9.9□□□□□ -0.82
UBXN1-218ENST00000616865 NUPR1O60356 82 aa9.9□□□□□ -0.82
UBXN1-218ENST00000616865 LINC00310P59036 64 aa9.9□□□□□ -0.82
UBXN1-218ENST00000616865 KRTAP10-1P60331 282 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms