RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 LINC00474Q9P2X8 69 aa6.49□□□□□ -1.37
VPS11-206ENST00000614944 TRBV30A0A0K0K1B3 111 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 USP17L23D6RBM5 183 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 F8VRH5 84 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 SOCS3O14543 225 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 ASH1LQ9NR48 2969 aaKnown RBP6.48□□□□□ -1.37
VPS11-206ENST00000614944 CREBBPQ92793 2442 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 LINC01546A6NGU7 62 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 HIST2H2BDQ6DRA6 164 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 CENPEQ02224 2701 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 A0A0J9YY99 117 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 C10orf99Q6UWK7 81 aa6.48□□□□□ -1.37
VPS11-206ENST00000614944 TMEM263Q8WUH6 116 aaKnown RBP6.48□□□□□ -1.37
VPS11-206ENST00000614944 IGHV4OR15-8A0A075B7B6 117 aa6.47□□□□□ -1.37
VPS11-206ENST00000614944 A0A087WW49 117 aa6.47□□□□□ -1.37
VPS11-206ENST00000614944 COX6CP09669 75 aa6.47□□□□□ -1.37
VPS11-206ENST00000614944 UNQ9165/PRO28630Q6UXU0 137 aa6.47□□□□□ -1.37
VPS11-206ENST00000614944 POLQO75417 2590 aa6.47□□□□□ -1.37
VPS11-206ENST00000614944 SPRY2O43597 315 aa6.47□□□□□ -1.37
VPS11-206ENST00000614944 PLAC8L1A1L4L8 177 aa6.46□□□□□ -1.37
VPS11-206ENST00000614944 SMKR1H3BMG3 65 aa6.46□□□□□ -1.37
VPS11-206ENST00000614944 IGHV3-11P01762 117 aa6.46□□□□□ -1.37
VPS11-206ENST00000614944 HOXD3P31249 432 aaPredicted RBP6.46□□□□□ -1.37
VPS11-206ENST00000614944 LENEPQ9Y5L5 61 aa6.46□□□□□ -1.37
VPS11-206ENST00000614944 APOC4P55056 127 aa6.46□□□□□ -1.38
VPS11-206ENST00000614944 C11orf44Q8N8P7 122 aa6.46□□□□□ -1.38
VPS11-206ENST00000614944 RBM12B-AS1Q9P1G2 102 aa6.46□□□□□ -1.38
VPS11-206ENST00000614944 TRBV7-6A0A0J9YX20 115 aa6.46□□□□□ -1.38
VPS11-206ENST00000614944 RBMY1BA6NDE4 496 aaKnown RBP6.46□□□□□ -1.38
VPS11-206ENST00000614944 RBMY1EA6NEQ0 496 aaKnown RBP6.46□□□□□ -1.38
VPS11-206ENST00000614944 ADARB2-AS1A8MUL3 147 aa6.46□□□□□ -1.38
VPS11-206ENST00000614944 TRIAP1O43715 76 aa6.46□□□□□ -1.38
VPS11-206ENST00000614944 RBMY1DP0C7P1 496 aaKnown RBP6.46□□□□□ -1.38
VPS11-206ENST00000614944 RBMY1A1P0DJD3 496 aaKnown RBP6.46□□□□□ -1.38
VPS11-206ENST00000614944 RBMY1CP0DJD4 496 aa6.46□□□□□ -1.38
VPS11-206ENST00000614944 RBMY1FQ15415 496 aaKnown RBP6.46□□□□□ -1.38
VPS11-206ENST00000614944 CCKP06307 115 aa6.45□□□□□ -1.38
VPS11-206ENST00000614944 PRSS2P07478 247 aa6.45□□□□□ -1.38
VPS11-206ENST00000614944 RBM3P98179 157 aaKnown RBP6.45□□□□□ -1.38
VPS11-206ENST00000614944 C20orf197Q8N268 126 aa6.45□□□□□ -1.38
VPS11-206ENST00000614944 ITPR2Q14571 2701 aa6.45□□□□□ -1.38
VPS11-206ENST00000614944 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.45□□□□□ -1.38
VPS11-206ENST00000614944 TRAV12-1A0A0B4J245 112 aa6.45□□□□□ -1.38
VPS11-206ENST00000614944 IGLV2-11P01706 119 aa6.45□□□□□ -1.38
VPS11-206ENST00000614944 SLC25A29Q8N8R3 303 aa6.45□□□□□ -1.38
VPS11-206ENST00000614944 RHPN1-AS1Q9BWJ2 59 aa6.45□□□□□ -1.38
VPS11-206ENST00000614944 OTOGQ6ZRI0 2925 aa6.45□□□□□ -1.38
VPS11-206ENST00000614944 GATA1P15976 413 aaPredicted RBP6.44□□□□□ -1.38
VPS11-206ENST00000614944 XCL1P47992 114 aa6.44□□□□□ -1.38
VPS11-206ENST00000614944 TIMM21Q9BVV7 248 aa6.44□□□□□ -1.38
VPS11-206ENST00000614944 XCL2Q9UBD3 114 aa6.44□□□□□ -1.38
VPS11-206ENST00000614944 CD28P10747 220 aa6.44□□□□□ -1.38
VPS11-206ENST00000614944 FLNAP21333 2647 aaKnown RBP6.44□□□□□ -1.38
VPS11-206ENST00000614944 A8MTW9 85 aa6.44□□□□□ -1.38
VPS11-206ENST00000614944 H7BZZ5 65 aa6.44□□□□□ -1.38
VPS11-206ENST00000614944 C9orf47Q6ZRZ4 202 aa6.44□□□□□ -1.38
VPS11-206ENST00000614944 KLHL30-AS1Q8NEE0 82 aa6.44□□□□□ -1.38
VPS11-206ENST00000614944 DCANP1Q8TF63 244 aa6.44□□□□□ -1.38
VPS11-206ENST00000614944 TEX15Q9BXT5 2789 aa6.43□□□□□ -1.38
VPS11-206ENST00000614944 LYPD5Q6UWN5 251 aa6.43□□□□□ -1.38
VPS11-206ENST00000614944 Q86TA4 180 aa6.43□□□□□ -1.38
VPS11-206ENST00000614944 TMEM223A0PJW6 202 aa6.43□□□□□ -1.38
VPS11-206ENST00000614944 CCL24O00175 119 aa6.43□□□□□ -1.38
VPS11-206ENST00000614944 CMC4P56277 68 aaPredicted RBP6.43□□□□□ -1.38
VPS11-206ENST00000614944 K7EQG2 157 aa6.42□□□□□ -1.38
VPS11-206ENST00000614944 LST1O00453 97 aa6.42□□□□□ -1.38
VPS11-206ENST00000614944 MPLKIPQ8TAP9 179 aa6.42□□□□□ -1.38
VPS11-206ENST00000614944 FASNP49327 2511 aaKnown RBP6.42□□□□□ -1.38
VPS11-206ENST00000614944 TRAV8-3A0A0A6YYJ7 113 aa6.42□□□□□ -1.38
VPS11-206ENST00000614944 PRB4P10163 310 aaPredicted RBP6.42□□□□□ -1.38
VPS11-206ENST00000614944 LYZL1Q6UWQ5 148 aa6.42□□□□□ -1.38
VPS11-206ENST00000614944 DAND5Q8N907 189 aa6.42□□□□□ -1.38
VPS11-206ENST00000614944 LGALS3P17931 250 aaKnown RBP6.41□□□□□ -1.38
VPS11-206ENST00000614944 DAD1P61803 113 aa6.41□□□□□ -1.38
VPS11-206ENST00000614944 NRACQ8N912 160 aa6.41□□□□□ -1.38
VPS11-206ENST00000614944 A0A087WVE0 104 aa6.41□□□□□ -1.38
VPS11-206ENST00000614944 IGKV3D-7A0A0C4DH55 119 aa6.41□□□□□ -1.38
VPS11-206ENST00000614944 EIF4EBP3O60516 100 aaPredicted RBP6.41□□□□□ -1.38
VPS11-206ENST00000614944 ICOSQ9Y6W8 199 aa6.41□□□□□ -1.38
VPS11-206ENST00000614944 GHRHP01286 108 aa6.41□□□□□ -1.38
VPS11-206ENST00000614944 KRTAP10-3P60369 221 aa6.41□□□□□ -1.38
VPS11-206ENST00000614944 S100A7L2Q5SY68 101 aa6.41□□□□□ -1.38
VPS11-206ENST00000614944 Q6JHZ5 121 aa6.41□□□□□ -1.38
VPS11-206ENST00000614944 PRNTQ86SH4 94 aa6.41□□□□□ -1.38
VPS11-206ENST00000614944 CSPG4Q6UVK1 2322 aa6.4□□□□□ -1.38
VPS11-206ENST00000614944 IGHV3-35A0A0C4DH35 117 aa6.4□□□□□ -1.38
VPS11-206ENST00000614944 SLURP1P55000 103 aa6.4□□□□□ -1.38
VPS11-206ENST00000614944 LAGE3Q14657 143 aa6.4□□□□□ -1.38
VPS11-206ENST00000614944 C18orf65Q6ZTR6 163 aa6.4□□□□□ -1.38
VPS11-206ENST00000614944 NOTCH3Q9UM47 2321 aa6.4□□□□□ -1.38
VPS11-206ENST00000614944 IGHV1-58A0A0C4DH39 117 aa6.4□□□□□ -1.38
VPS11-206ENST00000614944 CLEC2BQ92478 149 aa6.4□□□□□ -1.38
VPS11-206ENST00000614944 PRR25Q96S07 402 aa6.4□□□□□ -1.38
VPS11-206ENST00000614944 DEFB114Q30KQ6 69 aa6.4□□□□□ -1.39
VPS11-206ENST00000614944 C6orf223Q8N319 242 aa6.4□□□□□ -1.39
VPS11-206ENST00000614944 C11orf68Q9H3H3 251 aaKnown RBP6.4□□□□□ -1.39
VPS11-206ENST00000614944 ZANQ9Y493 2812 aa6.39□□□□□ -1.39
VPS11-206ENST00000614944 ATP5EP56381 51 aaPredicted RBP6.39□□□□□ -1.39
VPS11-206ENST00000614944 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms