RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 SMCPP49901 116 aaPredicted RBP4.43□□□□□ -1.7
CBWD3-210ENST00000614398 TWIST1Q15672 202 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
CBWD3-210ENST00000614398 CARD19Q96LW7 228 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 LINC01600Q96MT4 127 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 NOP10Q9NPE3 64 aaKnown RBP4.43□□□□□ -1.7
CBWD3-210ENST00000614398 C9JAW5 83 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 PPP1R17O96001 155 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 PRM2P04554 102 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 C12orf74Q32Q52 190 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 FAM222AQ5U5X8 452 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 Q6ZTI0 123 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 RNF185Q96GF1 192 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 TMEM101Q96IK0 257 aa4.43□□□□□ -1.7
CBWD3-210ENST00000614398 TRGV1A0A0A0MS02 117 aa4.42□□□□□ -1.7
CBWD3-210ENST00000614398 H3BNG1 76 aa4.42□□□□□ -1.7
CBWD3-210ENST00000614398 IGHV3-53P01767 116 aa4.42□□□□□ -1.7
CBWD3-210ENST00000614398 GATA1P15976 413 aaPredicted RBP4.42□□□□□ -1.7
CBWD3-210ENST00000614398 CHAC1Q9BUX1 264 aa4.42□□□□□ -1.7
CBWD3-210ENST00000614398 MSRB1Q9NZV6 116 aa4.42□□□□□ -1.7
CBWD3-210ENST00000614398 NACAE9PAV3 2078 aa4.42□□□□□ -1.7
CBWD3-210ENST00000614398 TRBV10-1A0A0K0K1A3 114 aa4.42□□□□□ -1.7
CBWD3-210ENST00000614398 TRBV6-5A0A0K0K1A5 114 aa4.42□□□□□ -1.7
CBWD3-210ENST00000614398 HTN1P15515 57 aa4.42□□□□□ -1.7
CBWD3-210ENST00000614398 PRADC1Q9BSG0 188 aa4.42□□□□□ -1.7
CBWD3-210ENST00000614398 DNAH9Q9NYC9 4486 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 TRBV6-4A0A1B0GX49 114 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 H7C1H1 209 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 LINC00694P0DN24 101 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 DAD1P61803 113 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 AP5S1Q9NUS5 200 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 NHP2Q9NX24 153 aaKnown RBP4.41□□□□□ -1.7
CBWD3-210ENST00000614398 CELA1Q9UNI1 258 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 NOTCH1P46531 2555 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 MEGF8Q7Z7M0 2845 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 TRBV20-1A0A075B6N2 111 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 A0A0J9YWU9 116 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 ATP5G1P05496 136 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 FHL2Q14192 279 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 MRPL51Q4U2R6 128 aaKnown RBP4.41□□□□□ -1.7
CBWD3-210ENST00000614398 BAALCQ8WXS3 180 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 KIR2DL4Q99706 377 aa4.41□□□□□ -1.7
CBWD3-210ENST00000614398 M0QY20 66 aa4.4□□□□□ -1.7
CBWD3-210ENST00000614398 CAMPP49913 170 aa4.4□□□□□ -1.7
CBWD3-210ENST00000614398 C14orf178Q8N769 122 aaPredicted RBP4.4□□□□□ -1.7
CBWD3-210ENST00000614398 TRGV2A0A075B6R0 118 aa4.4□□□□□ -1.71
CBWD3-210ENST00000614398 LINC01546A6NGU7 62 aa4.4□□□□□ -1.71
CBWD3-210ENST00000614398 SUMO4Q6EEV6 95 aa4.4□□□□□ -1.71
CBWD3-210ENST00000614398 AMN1Q8IY45 258 aa4.4□□□□□ -1.71
CBWD3-210ENST00000614398 ORMDL3Q8N138 153 aa4.4□□□□□ -1.71
CBWD3-210ENST00000614398 NRACQ8N912 160 aa4.4□□□□□ -1.71
CBWD3-210ENST00000614398 C11orf45Q8TAV5 145 aa4.4□□□□□ -1.71
CBWD3-210ENST00000614398 JPT2Q9H910 190 aa4.4□□□□□ -1.71
CBWD3-210ENST00000614398 HUWE1Q7Z6Z7 4374 aaKnown RBP4.4□□□□□ -1.71
CBWD3-210ENST00000614398 TRAV10A0A0B4J240 114 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 K7EQD1 137 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 K7ERJ3 54 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 NCR2O95944 276 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 NMUP48645 174 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 TIRAPP58753 221 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 RHOHQ15669 191 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 IMUPQ9GZP8 106 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 PRO0255Q9UI72 69 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 A0A087WWL8 130 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 TRBV7-7A0A0K0K1E9 115 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 K7EMI3 77 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 UQCRQO14949 82 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 EMP1P54849 157 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 UBE2D3P61077 147 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 UBE2D2P62837 147 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 PCP2Q8IVA1 136 aa4.39□□□□□ -1.71
CBWD3-210ENST00000614398 TRBV25-1A0A075B6N4 114 aa4.38□□□□□ -1.71
CBWD3-210ENST00000614398 PMVKQ15126 192 aa4.38□□□□□ -1.71
CBWD3-210ENST00000614398 ZNF56Q15929 161 aa4.38□□□□□ -1.71
CBWD3-210ENST00000614398 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
CBWD3-210ENST00000614398 LINC00526Q96FQ7 95 aa4.38□□□□□ -1.71
CBWD3-210ENST00000614398 DEFB4AO15263 64 aa4.38□□□□□ -1.71
CBWD3-210ENST00000614398 DEFB130BP0DP73 79 aa4.38□□□□□ -1.71
CBWD3-210ENST00000614398 DEFB130AP0DP74 79 aa4.38□□□□□ -1.71
CBWD3-210ENST00000614398 CKS2P33552 79 aa4.38□□□□□ -1.71
CBWD3-210ENST00000614398 TRBV7-3A0A075B6L6 115 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 TRGV4A0A0C4DH28 118 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 D6R8Y8 96 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 MGPP08493 103 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 SCGB1C2P0DMR2 95 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 POLR2KP53803 58 aaKnown RBP4.37□□□□□ -1.71
CBWD3-210ENST00000614398 Q6ZSN1 163 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 SLC25A29Q8N8R3 303 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 HHLA3Q9XRX5 114 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 TRBV27A0A0K0K1C4 114 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 LOC107984640A0A0U1RRK4 108 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 FAM240AA0A1B0GVK7 77 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 TNFRSF6BO95407 300 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 RPL13AP40429 203 aaKnown RBP4.37□□□□□ -1.71
CBWD3-210ENST00000614398 HERVK_113P63121 156 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 FAM74A4Q5TZK3 123 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 Q6ZTC4 211 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 C15orf53Q8NAA6 179 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 NEXN-AS1Q8NBZ9 246 aa4.37□□□□□ -1.71
CBWD3-210ENST00000614398 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms