RNA–Protein interactions for RNA: ENST00000612779.1

HOXA2-202, Transcript of homeobox A2, humanhuman

Gene HOXA2, Length 1,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-202ENST00000612779 RPL39P62891 51 aaKnown RBP13.38□□□□□ -0.27
HOXA2-202ENST00000612779 C20orf203Q8NBC4 194 aa13.38□□□□□ -0.27
HOXA2-202ENST00000612779 FBN3Q75N90 2809 aa13.38□□□□□ -0.27
HOXA2-202ENST00000612779 IGHV3-38A0A0C4DH36 116 aa13.38□□□□□ -0.27
HOXA2-202ENST00000612779 LOC100131303A0A0U1RQF7 123 aa13.38□□□□□ -0.27
HOXA2-202ENST00000612779 TEX48A0A1B0GUV7 120 aa13.38□□□□□ -0.27
HOXA2-202ENST00000612779 SPART-AS1P0CW21 52 aa13.38□□□□□ -0.27
HOXA2-202ENST00000612779 SBSPONQ8IVN8 264 aa13.38□□□□□ -0.27
HOXA2-202ENST00000612779 SCGB3A1Q96QR1 104 aa13.38□□□□□ -0.27
HOXA2-202ENST00000612779 TRBV25-1A0A075B6N4 114 aa13.37□□□□□ -0.27
HOXA2-202ENST00000612779 LINC01549A6NIU2 74 aa13.37□□□□□ -0.27
HOXA2-202ENST00000612779 IGIPA6NJ69 53 aa13.37□□□□□ -0.27
HOXA2-202ENST00000612779 TAL2Q16559 108 aa13.37□□□□□ -0.27
HOXA2-202ENST00000612779 CEND1Q8N111 149 aa13.37□□□□□ -0.27
HOXA2-202ENST00000612779 GAGE12JA6NER3 117 aa13.36□□□□□ -0.27
HOXA2-202ENST00000612779 E9PLD3 99 aa13.36□□□□□ -0.27
HOXA2-202ENST00000612779 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.36□□□□□ -0.27
HOXA2-202ENST00000612779 DPM2O94777 84 aa13.36□□□□□ -0.27
HOXA2-202ENST00000612779 DAD1P61803 113 aa13.36□□□□□ -0.27
HOXA2-202ENST00000612779 GAGE4Q13068 117 aa13.36□□□□□ -0.27
HOXA2-202ENST00000612779 GAGE5Q13069 117 aa13.36□□□□□ -0.27
HOXA2-202ENST00000612779 GAGE13Q4V321 117 aa13.36□□□□□ -0.27
HOXA2-202ENST00000612779 LINC00694P0DN24 101 aa13.36□□□□□ -0.27
HOXA2-202ENST00000612779 RPL24P83731 157 aaKnown RBP13.36□□□□□ -0.27
HOXA2-202ENST00000612779 CHCHD7Q9BUK0 85 aa13.36□□□□□ -0.27
HOXA2-202ENST00000612779 CRYBA4P53673 196 aa13.35□□□□□ -0.27
HOXA2-202ENST00000612779 F8W1H4 67 aa13.34□□□□□ -0.27
HOXA2-202ENST00000612779 DAZ4Q86SG3 579 aaKnown RBP13.34□□□□□ -0.27
HOXA2-202ENST00000612779 PRADC1Q9BSG0 188 aa13.34□□□□□ -0.27
HOXA2-202ENST00000612779 C11orf68Q9H3H3 251 aaKnown RBP13.34□□□□□ -0.27
HOXA2-202ENST00000612779 DAZ3Q9NR90 486 aaKnown RBP13.34□□□□□ -0.27
HOXA2-202ENST00000612779 PRSS1P07477 247 aa13.34□□□□□ -0.27
HOXA2-202ENST00000612779 TIMM17AQ99595 171 aa13.33□□□□□ -0.28
HOXA2-202ENST00000612779 PRO0255Q9UI72 69 aa13.33□□□□□ -0.28
HOXA2-202ENST00000612779 IGLL5B9A064 214 aa13.32□□□□□ -0.28
HOXA2-202ENST00000612779 K7ERJ3 54 aa13.32□□□□□ -0.28
HOXA2-202ENST00000612779 ZC2HC1BQ5TFG8 222 aa13.32□□□□□ -0.28
HOXA2-202ENST00000612779 NTM-AS1Q6ZSK4 140 aa13.32□□□□□ -0.28
HOXA2-202ENST00000612779 SIGMAR1Q99720 223 aa13.32□□□□□ -0.28
HOXA2-202ENST00000612779 TTTY13Q9BZ97 58 aa13.32□□□□□ -0.28
HOXA2-202ENST00000612779 SPANXB1Q9NS25 103 aaPredicted RBP13.32□□□□□ -0.28
HOXA2-202ENST00000612779 NHP2Q9NX24 153 aaKnown RBP13.32□□□□□ -0.28
HOXA2-202ENST00000612779 J3QR89 54 aa13.32□□□□□ -0.28
HOXA2-202ENST00000612779 ATP5G1P05496 136 aa13.32□□□□□ -0.28
HOXA2-202ENST00000612779 BAALCQ8WXS3 180 aa13.32□□□□□ -0.28
HOXA2-202ENST00000612779 TM2D3Q9BRN9 247 aa13.32□□□□□ -0.28
HOXA2-202ENST00000612779 TENM3Q9P273 2699 aa13.31□□□□□ -0.28
HOXA2-202ENST00000612779 TMEM141Q96I45 108 aa13.31□□□□□ -0.28
HOXA2-202ENST00000612779 TRAV12-1A0A0B4J245 112 aa13.31□□□□□ -0.28
HOXA2-202ENST00000612779 DEFB121Q5J5C9 76 aa13.31□□□□□ -0.28
HOXA2-202ENST00000612779 A0A087WX48 190 aa13.3□□□□□ -0.28
HOXA2-202ENST00000612779 C12orf74Q32Q52 190 aa13.3□□□□□ -0.28
HOXA2-202ENST00000612779 VSIG2Q96IQ7 327 aa13.3□□□□□ -0.28
HOXA2-202ENST00000612779 SPATA25Q9BR10 227 aa13.3□□□□□ -0.28
HOXA2-202ENST00000612779 FAM104AQ969W3 186 aa13.29□□□□□ -0.28
HOXA2-202ENST00000612779 GTSF1LQ9H1H1 148 aa13.29□□□□□ -0.28
HOXA2-202ENST00000612779 PYGO1Q9Y3Y4 419 aa13.29□□□□□ -0.28
HOXA2-202ENST00000612779 GYPEP15421 78 aa13.29□□□□□ -0.28
HOXA2-202ENST00000612779 GAGE12HA6NDE8 117 aa13.28□□□□□ -0.28
HOXA2-202ENST00000612779 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.27□□□□□ -0.28
HOXA2-202ENST00000612779 A0A1B0GWB2 263 aa13.27□□□□□ -0.28
HOXA2-202ENST00000612779 IGKV2-29A2NJV5 120 aaPredicted RBP13.27□□□□□ -0.28
HOXA2-202ENST00000612779 PAX4O43316 350 aa13.27□□□□□ -0.28
HOXA2-202ENST00000612779 OPRPNQ99935 248 aaPredicted RBP13.27□□□□□ -0.28
HOXA2-202ENST00000612779 MRPL35Q9NZE8 188 aaKnown RBP13.27□□□□□ -0.28
HOXA2-202ENST00000612779 A0A0J9YWU9 116 aa13.27□□□□□ -0.29
HOXA2-202ENST00000612779 UBE2D4Q9Y2X8 147 aa13.27□□□□□ -0.29
HOXA2-202ENST00000612779 IGLV4-3A0A075B6K6 122 aa13.26□□□□□ -0.29
HOXA2-202ENST00000612779 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
HOXA2-202ENST00000612779 PLNP26678 52 aa13.26□□□□□ -0.29
HOXA2-202ENST00000612779 WFDC2Q14508 124 aa13.26□□□□□ -0.29
HOXA2-202ENST00000612779 MAPKAPK5-AS1Q8N8E1 139 aa13.26□□□□□ -0.29
HOXA2-202ENST00000612779 MRAPQ8TCY5 172 aa13.26□□□□□ -0.29
HOXA2-202ENST00000612779 CEMP1Q6PRD7 247 aaPredicted RBP13.25□□□□□ -0.29
HOXA2-202ENST00000612779 F5H768 121 aa13.25□□□□□ -0.29
HOXA2-202ENST00000612779 F8VRH5 84 aa13.25□□□□□ -0.29
HOXA2-202ENST00000612779 PMVKQ15126 192 aa13.25□□□□□ -0.29
HOXA2-202ENST00000612779 SPANXA1Q9NS26 97 aa13.25□□□□□ -0.29
HOXA2-202ENST00000612779 TRAV26-1A0A087WT03 109 aa13.24□□□□□ -0.29
HOXA2-202ENST00000612779 A0A0J9YY99 117 aa13.24□□□□□ -0.29
HOXA2-202ENST00000612779 TIMM21Q9BVV7 248 aa13.24□□□□□ -0.29
HOXA2-202ENST00000612779 PRO0461Q9UI25 63 aa13.24□□□□□ -0.29
HOXA2-202ENST00000612779 ATP6V0E2Q8NHE4 81 aa13.23□□□□□ -0.29
HOXA2-202ENST00000612779 MEGF8Q7Z7M0 2845 aa13.23□□□□□ -0.29
HOXA2-202ENST00000612779 HTN3P15516 51 aa13.23□□□□□ -0.29
HOXA2-202ENST00000612779 SMAGPQ0VAQ4 97 aa13.23□□□□□ -0.29
HOXA2-202ENST00000612779 TRBV6-8A0A0A6YYG3 113 aa13.22□□□□□ -0.29
HOXA2-202ENST00000612779 A0A1B0GV72 72 aa13.22□□□□□ -0.29
HOXA2-202ENST00000612779 HIST1H4GQ99525 98 aa13.22□□□□□ -0.29
HOXA2-202ENST00000612779 H3BMG7 143 aa13.21□□□□□ -0.29
HOXA2-202ENST00000612779 AMELXQ99217 191 aa13.21□□□□□ -0.29
HOXA2-202ENST00000612779 IGLV4-69A0A075B6H9 119 aa13.21□□□□□ -0.29
HOXA2-202ENST00000612779 Q6ZTC4 211 aa13.21□□□□□ -0.29
HOXA2-202ENST00000612779 TMEM243Q9BU79 118 aa13.21□□□□□ -0.29
HOXA2-202ENST00000612779 ETDBQ3ZM63 59 aa13.2□□□□□ -0.3
HOXA2-202ENST00000612779 MRPS36P82909 103 aaKnown RBP13.2□□□□□ -0.3
HOXA2-202ENST00000612779 PAPPA-AS1Q5QFB9 102 aa13.2□□□□□ -0.3
HOXA2-202ENST00000612779 CSDC2Q9Y534 153 aaKnown RBP13.2□□□□□ -0.3
HOXA2-202ENST00000612779 SH2D6Q7Z4S9 175 aa13.19□□□□□ -0.3
HOXA2-202ENST00000612779 C11orf45Q8TAV5 145 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms