RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 DNAJC30Q96LL9 226 aa13.88□□□□□ -0.19
SRRM3-205ENST00000612155 NFE4Q86UQ8 179 aa13.87□□□□□ -0.19
SRRM3-205ENST00000612155 Q8NAQ8 132 aa13.87□□□□□ -0.19
SRRM3-205ENST00000612155 GCSHP23434 173 aa13.86□□□□□ -0.19
SRRM3-205ENST00000612155 TSPEAR-AS2P59090 65 aa13.86□□□□□ -0.19
SRRM3-205ENST00000612155 DAZ2Q13117 558 aaKnown RBP13.86□□□□□ -0.19
SRRM3-205ENST00000612155 PYGO1Q9Y3Y4 419 aa13.86□□□□□ -0.19
SRRM3-205ENST00000612155 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.86□□□□□ -0.19
SRRM3-205ENST00000612155 IGKV2-29A2NJV5 120 aaPredicted RBP13.86□□□□□ -0.19
SRRM3-205ENST00000612155 OCIAD2Q56VL3 154 aa13.85□□□□□ -0.19
SRRM3-205ENST00000612155 PAPPA-AS1Q5QFB9 102 aa13.85□□□□□ -0.19
SRRM3-205ENST00000612155 PLEKHB2Q96CS7 222 aa13.85□□□□□ -0.19
SRRM3-205ENST00000612155 AMELXQ99217 191 aa13.85□□□□□ -0.19
SRRM3-205ENST00000612155 RNASE13Q5GAN3 156 aaKnown RBP13.85□□□□□ -0.19
SRRM3-205ENST00000612155 STAB2Q8WWQ8 2551 aa13.84□□□□□ -0.19
SRRM3-205ENST00000612155 TRAV4A0A0B4J268 109 aa13.84□□□□□ -0.19
SRRM3-205ENST00000612155 A0A0J9YXV3 536 aa13.84□□□□□ -0.19
SRRM3-205ENST00000612155 H3BRM9 83 aa13.84□□□□□ -0.19
SRRM3-205ENST00000612155 TMEM170BQ5T4T1 132 aa13.84□□□□□ -0.19
SRRM3-205ENST00000612155 CEND1Q8N111 149 aa13.84□□□□□ -0.19
SRRM3-205ENST00000612155 C16orf74Q96GX8 76 aa13.84□□□□□ -0.19
SRRM3-205ENST00000612155 TM2D2Q9BX73 214 aa13.84□□□□□ -0.19
SRRM3-205ENST00000612155 TRBV7-3A0A075B6L6 115 aa13.83□□□□□ -0.19
SRRM3-205ENST00000612155 A6NDN8 102 aa13.83□□□□□ -0.19
SRRM3-205ENST00000612155 VCX2Q9H322 139 aa13.83□□□□□ -0.19
SRRM3-205ENST00000612155 UBE2D4Q9Y2X8 147 aa13.83□□□□□ -0.19
SRRM3-205ENST00000612155 A0A0J9YWU9 116 aa13.83□□□□□ -0.2
SRRM3-205ENST00000612155 VAMP3Q15836 100 aa13.83□□□□□ -0.2
SRRM3-205ENST00000612155 AMMECR1LQ6DCA0 310 aa13.83□□□□□ -0.2
SRRM3-205ENST00000612155 NAA38Q9BRA0 125 aaKnown RBP13.83□□□□□ -0.2
SRRM3-205ENST00000612155 CELA1Q9UNI1 258 aa13.83□□□□□ -0.2
SRRM3-205ENST00000612155 ZNF815PA8K554 130 aa13.82□□□□□ -0.2
SRRM3-205ENST00000612155 MIFP14174 115 aa13.82□□□□□ -0.2
SRRM3-205ENST00000612155 SLC25A29Q8N8R3 303 aa13.82□□□□□ -0.2
SRRM3-205ENST00000612155 GAGE12BA1L429 117 aa13.82□□□□□ -0.2
SRRM3-205ENST00000612155 GAGE7O76087 117 aa13.82□□□□□ -0.2
SRRM3-205ENST00000612155 GAGE12FP0CL80 117 aa13.82□□□□□ -0.2
SRRM3-205ENST00000612155 GAGE12GP0CL81 117 aa13.82□□□□□ -0.2
SRRM3-205ENST00000612155 GAGE12IP0CL82 117 aa13.82□□□□□ -0.2
SRRM3-205ENST00000612155 ZNF22P17026 224 aaPredicted RBP13.82□□□□□ -0.2
SRRM3-205ENST00000612155 A0A1B0GV72 72 aa13.81□□□□□ -0.2
SRRM3-205ENST00000612155 K7EQD1 137 aa13.81□□□□□ -0.2
SRRM3-205ENST00000612155 K7ERJ3 54 aa13.81□□□□□ -0.2
SRRM3-205ENST00000612155 RAB37Q96AX2 223 aa13.81□□□□□ -0.2
SRRM3-205ENST00000612155 TMEM223A0PJW6 202 aa13.81□□□□□ -0.2
SRRM3-205ENST00000612155 SMIM9A6NGZ8 99 aa13.81□□□□□ -0.2
SRRM3-205ENST00000612155 C9orf118A6NHY6 69 aa13.81□□□□□ -0.2
SRRM3-205ENST00000612155 K7ERU9 68 aa13.81□□□□□ -0.2
SRRM3-205ENST00000612155 HERVK_113P61574 105 aa13.79□□□□□ -0.2
SRRM3-205ENST00000612155 FAM222AQ5U5X8 452 aa13.79□□□□□ -0.2
SRRM3-205ENST00000612155 NTM-AS1Q6ZSK4 140 aa13.79□□□□□ -0.2
SRRM3-205ENST00000612155 Q6ZUT4 128 aa13.79□□□□□ -0.2
SRRM3-205ENST00000612155 TAL2Q16559 108 aa13.79□□□□□ -0.2
SRRM3-205ENST00000612155 SPANXA1Q9NS26 97 aa13.79□□□□□ -0.2
SRRM3-205ENST00000612155 DEFB130BP0DP73 79 aa13.78□□□□□ -0.2
SRRM3-205ENST00000612155 DEFB130AP0DP74 79 aa13.78□□□□□ -0.2
SRRM3-205ENST00000612155 HIST1H4GQ99525 98 aa13.78□□□□□ -0.2
SRRM3-205ENST00000612155 SCGB1A1P11684 91 aa13.78□□□□□ -0.2
SRRM3-205ENST00000612155 TRBV10-1A0A0K0K1A3 114 aa13.77□□□□□ -0.21
SRRM3-205ENST00000612155 LOC100131303A0A0U1RQF7 123 aa13.77□□□□□ -0.21
SRRM3-205ENST00000612155 H3BUT2 72 aa13.77□□□□□ -0.21
SRRM3-205ENST00000612155 LINC00694P0DN24 101 aa13.77□□□□□ -0.21
SRRM3-205ENST00000612155 UBE2D3P61077 147 aa13.77□□□□□ -0.21
SRRM3-205ENST00000612155 UBE2D2P62837 147 aa13.77□□□□□ -0.21
SRRM3-205ENST00000612155 MRPS36P82909 103 aaKnown RBP13.77□□□□□ -0.21
SRRM3-205ENST00000612155 GAGE12JA6NER3 117 aa13.76□□□□□ -0.21
SRRM3-205ENST00000612155 CRYBA4P53673 196 aa13.76□□□□□ -0.21
SRRM3-205ENST00000612155 GAGE4Q13068 117 aa13.76□□□□□ -0.21
SRRM3-205ENST00000612155 GAGE5Q13069 117 aa13.76□□□□□ -0.21
SRRM3-205ENST00000612155 GAGE13Q4V321 117 aa13.76□□□□□ -0.21
SRRM3-205ENST00000612155 NHP2Q9NX24 153 aaKnown RBP13.76□□□□□ -0.21
SRRM3-205ENST00000612155 IGHV3-64A0A075B6Q5 118 aa13.76□□□□□ -0.21
SRRM3-205ENST00000612155 TRGV2A0A075B6R0 118 aa13.76□□□□□ -0.21
SRRM3-205ENST00000612155 SMIM13P0DJ93 91 aa13.76□□□□□ -0.21
SRRM3-205ENST00000612155 A0A0J9YY99 117 aa13.75□□□□□ -0.21
SRRM3-205ENST00000612155 J3QQQ9 107 aa13.75□□□□□ -0.21
SRRM3-205ENST00000612155 RPL36AP83881 106 aaKnown RBP13.75□□□□□ -0.21
SRRM3-205ENST00000612155 RPL36ALQ969Q0 106 aaKnown RBP13.75□□□□□ -0.21
SRRM3-205ENST00000612155 LEPROTO15243 131 aa13.74□□□□□ -0.21
SRRM3-205ENST00000612155 NHLRC4P0CG21 123 aaPredicted RBP13.74□□□□□ -0.21
SRRM3-205ENST00000612155 OR5A1Q8NGJ0 315 aa13.73□□□□□ -0.21
SRRM3-205ENST00000612155 FHL2Q14192 279 aa13.73□□□□□ -0.21
SRRM3-205ENST00000612155 SCGB1D4Q6XE38 83 aa13.73□□□□□ -0.21
SRRM3-205ENST00000612155 NANOS2P60321 138 aaKnown RBP13.72□□□□□ -0.21
SRRM3-205ENST00000612155 DAZ4Q86SG3 579 aaKnown RBP13.72□□□□□ -0.21
SRRM3-205ENST00000612155 C11orf68Q9H3H3 251 aaKnown RBP13.72□□□□□ -0.21
SRRM3-205ENST00000612155 DAZ3Q9NR90 486 aaKnown RBP13.72□□□□□ -0.21
SRRM3-205ENST00000612155 C12orf74Q32Q52 190 aa13.72□□□□□ -0.21
SRRM3-205ENST00000612155 TIMM21Q9BVV7 248 aa13.71□□□□□ -0.21
SRRM3-205ENST00000612155 TRAV8-3A0A0A6YYJ7 113 aa13.71□□□□□ -0.22
SRRM3-205ENST00000612155 SPART-AS1P0CW21 52 aa13.71□□□□□ -0.22
SRRM3-205ENST00000612155 UBE2D1P51668 147 aa13.71□□□□□ -0.22
SRRM3-205ENST00000612155 TINCRA0A1B0GVN0 87 aa13.7□□□□□ -0.22
SRRM3-205ENST00000612155 TRBV6-4A0A1B0GX49 114 aa13.7□□□□□ -0.22
SRRM3-205ENST00000612155 LGALS3P17931 250 aaKnown RBP13.7□□□□□ -0.22
SRRM3-205ENST00000612155 A0A1B0GWB2 263 aa13.69□□□□□ -0.22
SRRM3-205ENST00000612155 A0A1W2PPM0 123 aa13.69□□□□□ -0.22
SRRM3-205ENST00000612155 DAD1P61803 113 aa13.69□□□□□ -0.22
SRRM3-205ENST00000612155 LINC00612Q8N6U2 182 aa13.69□□□□□ -0.22
SRRM3-205ENST00000612155 IGHV3-30-3P0DP02 117 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms