RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 STPG4Q8N801 248 aa8.57□□□□□ -1.04
CBWD1-220ENST00000612045 C11orf45Q8TAV5 145 aa8.57□□□□□ -1.04
CBWD1-220ENST00000612045 AMELXQ99217 191 aa8.57□□□□□ -1.04
CBWD1-220ENST00000612045 PRKDCP78527 4128 aaKnown RBP8.57□□□□□ -1.04
CBWD1-220ENST00000612045 A0A096LPF7 62 aa8.57□□□□□ -1.04
CBWD1-220ENST00000612045 UBE2L6O14933 153 aa8.57□□□□□ -1.04
CBWD1-220ENST00000612045 MRPL52Q86TS9 123 aaKnown RBP8.57□□□□□ -1.04
CBWD1-220ENST00000612045 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
CBWD1-220ENST00000612045 H7C423 109 aa8.56□□□□□ -1.04
CBWD1-220ENST00000612045 IGLC3P0DOY3 106 aa8.56□□□□□ -1.04
CBWD1-220ENST00000612045 NANOS2P60321 138 aaKnown RBP8.56□□□□□ -1.04
CBWD1-220ENST00000612045 MRPS36P82909 103 aaKnown RBP8.56□□□□□ -1.04
CBWD1-220ENST00000612045 ANKRD39Q53RE8 183 aa8.56□□□□□ -1.04
CBWD1-220ENST00000612045 DGAT2L7PQ6IED9 249 aa8.56□□□□□ -1.04
CBWD1-220ENST00000612045 Q6ZUT4 128 aa8.56□□□□□ -1.04
CBWD1-220ENST00000612045 DDTP30046 118 aa8.55□□□□□ -1.04
CBWD1-220ENST00000612045 SMAGPQ0VAQ4 97 aa8.55□□□□□ -1.04
CBWD1-220ENST00000612045 MRPL23Q16540 153 aaKnown RBP8.55□□□□□ -1.04
CBWD1-220ENST00000612045 RNASE13Q5GAN3 156 aaKnown RBP8.55□□□□□ -1.04
CBWD1-220ENST00000612045 C14orf144Q96I85 54 aa8.55□□□□□ -1.04
CBWD1-220ENST00000612045 CSDC2Q9Y534 153 aaKnown RBP8.55□□□□□ -1.04
CBWD1-220ENST00000612045 MIEN1Q9BRT3 115 aa8.54□□□□□ -1.04
CBWD1-220ENST00000612045 ICOSQ9Y6W8 199 aa8.54□□□□□ -1.04
CBWD1-220ENST00000612045 COL7A1Q02388 2944 aa8.54□□□□□ -1.04
CBWD1-220ENST00000612045 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
CBWD1-220ENST00000612045 TCTAP57738 103 aa8.54□□□□□ -1.04
CBWD1-220ENST00000612045 GAGE6Q13070 117 aa8.54□□□□□ -1.04
CBWD1-220ENST00000612045 AMMECR1LQ6DCA0 310 aa8.54□□□□□ -1.04
CBWD1-220ENST00000612045 CHCHD5Q9BSY4 110 aa8.54□□□□□ -1.04
CBWD1-220ENST00000612045 SH2D6Q7Z4S9 175 aa8.53□□□□□ -1.04
CBWD1-220ENST00000612045 OR5A1Q8NGJ0 315 aa8.53□□□□□ -1.04
CBWD1-220ENST00000612045 B9D2Q9BPU9 175 aa8.53□□□□□ -1.04
CBWD1-220ENST00000612045 C2orf88Q9BSF0 95 aa8.53□□□□□ -1.04
CBWD1-220ENST00000612045 CDC42SE2Q9NRR3 84 aa8.53□□□□□ -1.04
CBWD1-220ENST00000612045 UQCR10Q9UDW1 63 aa8.53□□□□□ -1.04
CBWD1-220ENST00000612045 LINC00587B1AMM8 73 aa8.52□□□□□ -1.04
CBWD1-220ENST00000612045 H3BNG1 76 aa8.52□□□□□ -1.04
CBWD1-220ENST00000612045 NFE4Q86UQ8 179 aa8.52□□□□□ -1.04
CBWD1-220ENST00000612045 TMEM101Q96IK0 257 aa8.52□□□□□ -1.04
CBWD1-220ENST00000612045 DEFB131BA0A096LNP1 70 aa8.52□□□□□ -1.05
CBWD1-220ENST00000612045 ZNF25P17030 456 aaPredicted RBP8.52□□□□□ -1.05
CBWD1-220ENST00000612045 CHAC1Q9BUX1 264 aa8.52□□□□□ -1.05
CBWD1-220ENST00000612045 A0A0J9YXV3 536 aa8.51□□□□□ -1.05
CBWD1-220ENST00000612045 NMUP48645 174 aa8.51□□□□□ -1.05
CBWD1-220ENST00000612045 DYNC2H1Q8NCM8 4307 aaKnown RBP8.51□□□□□ -1.05
CBWD1-220ENST00000612045 IGKV2D-26A0A0A0MRZ7 120 aa8.5□□□□□ -1.05
CBWD1-220ENST00000612045 COX8AP10176 69 aa8.5□□□□□ -1.05
CBWD1-220ENST00000612045 UBE2D1P51668 147 aa8.5□□□□□ -1.05
CBWD1-220ENST00000612045 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
CBWD1-220ENST00000612045 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
CBWD1-220ENST00000612045 SLC25A34Q6PIV7 304 aa8.5□□□□□ -1.05
CBWD1-220ENST00000612045 TP73-AS1Q9UF72 201 aa8.5□□□□□ -1.05
CBWD1-220ENST00000612045 STAB2Q8WWQ8 2551 aa8.49□□□□□ -1.05
CBWD1-220ENST00000612045 IGLV4-60A0A075B6I1 120 aa8.49□□□□□ -1.05
CBWD1-220ENST00000612045 TINCRA0A1B0GVN0 87 aa8.49□□□□□ -1.05
CBWD1-220ENST00000612045 MEGF8Q7Z7M0 2845 aa8.49□□□□□ -1.05
CBWD1-220ENST00000612045 TRAV10A0A0B4J240 114 aa8.48□□□□□ -1.05
CBWD1-220ENST00000612045 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
CBWD1-220ENST00000612045 ZNF22P17026 224 aaPredicted RBP8.48□□□□□ -1.05
CBWD1-220ENST00000612045 LELP1Q5T871 98 aa8.48□□□□□ -1.05
CBWD1-220ENST00000612045 PCP2Q8IVA1 136 aa8.48□□□□□ -1.05
CBWD1-220ENST00000612045 E9PLD3 99 aa8.47□□□□□ -1.05
CBWD1-220ENST00000612045 RBX1P62877 108 aa8.47□□□□□ -1.05
CBWD1-220ENST00000612045 MPV17L2Q567V2 206 aa8.47□□□□□ -1.05
CBWD1-220ENST00000612045 LYPD5Q6UWN5 251 aa8.47□□□□□ -1.05
CBWD1-220ENST00000612045 BOD1L2Q8IYS8 172 aa8.47□□□□□ -1.05
CBWD1-220ENST00000612045 TRAV13-1A0A0B4J241 112 aa8.47□□□□□ -1.05
CBWD1-220ENST00000612045 HNRNPA3P51991 378 aaKnown RBP8.47□□□□□ -1.05
CBWD1-220ENST00000612045 TIRAPP58753 221 aa8.47□□□□□ -1.05
CBWD1-220ENST00000612045 HERVK_113P61574 105 aa8.47□□□□□ -1.05
CBWD1-220ENST00000612045 FAM19A3Q7Z5A8 133 aa8.47□□□□□ -1.05
CBWD1-220ENST00000612045 DLEU1O43261 78 aa8.46□□□□□ -1.06
CBWD1-220ENST00000612045 LINC00242Q5T6M2 205 aa8.46□□□□□ -1.06
CBWD1-220ENST00000612045 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.06
CBWD1-220ENST00000612045 DNAH7Q8WXX0 4024 aa8.46□□□□□ -1.06
CBWD1-220ENST00000612045 TMEM223A0PJW6 202 aa8.45□□□□□ -1.06
CBWD1-220ENST00000612045 NHLRC4P0CG21 123 aaPredicted RBP8.45□□□□□ -1.06
CBWD1-220ENST00000612045 DEFA6Q01524 100 aa8.45□□□□□ -1.06
CBWD1-220ENST00000612045 TTTY13Q9BZ97 58 aa8.45□□□□□ -1.06
CBWD1-220ENST00000612045 TRAV8-6A0A0B4J262 113 aa8.45□□□□□ -1.06
CBWD1-220ENST00000612045 HERVK_113P63121 156 aa8.45□□□□□ -1.06
CBWD1-220ENST00000612045 SEC11AP67812 179 aa8.45□□□□□ -1.06
CBWD1-220ENST00000612045 CTAG1AP78358 180 aa8.45□□□□□ -1.06
CBWD1-220ENST00000612045 COX6A2Q02221 97 aa8.45□□□□□ -1.06
CBWD1-220ENST00000612045 LINC00469Q8N7U9 141 aa8.45□□□□□ -1.06
CBWD1-220ENST00000612045 IGLV5-45A0A087WSX0 123 aa8.44□□□□□ -1.06
CBWD1-220ENST00000612045 MRPS16Q9Y3D3 137 aaKnown RBP8.44□□□□□ -1.06
CBWD1-220ENST00000612045 IGKV3OR2-268A0A0C4DH90 116 aa8.43□□□□□ -1.06
CBWD1-220ENST00000612045 C2orf91Q6ZV80 131 aa8.43□□□□□ -1.06
CBWD1-220ENST00000612045 Q8N3U1 123 aa8.43□□□□□ -1.06
CBWD1-220ENST00000612045 MAPKAPK5-AS1Q8N8E1 139 aa8.43□□□□□ -1.06
CBWD1-220ENST00000612045 CDKN2A-AS1Q9UH64 79 aa8.43□□□□□ -1.06
CBWD1-220ENST00000612045 ESRGQ1W209 222 aa8.43□□□□□ -1.06
CBWD1-220ENST00000612045 PLECQ15149 4684 aaKnown RBP8.42□□□□□ -1.06
CBWD1-220ENST00000612045 IGHV3-64A0A075B6Q5 118 aa8.42□□□□□ -1.06
CBWD1-220ENST00000612045 H3BRM9 83 aa8.42□□□□□ -1.06
CBWD1-220ENST00000612045 C15orf53Q8NAA6 179 aa8.42□□□□□ -1.06
CBWD1-220ENST00000612045 LINC00959A0A1B0GUT2 108 aa8.41□□□□□ -1.06
CBWD1-220ENST00000612045 J3QQQ9 107 aa8.41□□□□□ -1.06
CBWD1-220ENST00000612045 LEPROTO15243 131 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms