RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 RPS10P46783 165 aaKnown RBP8.11□□□□□ -1.11
FAM228B-207ENST00000611917 HBBP68871 147 aa8.11□□□□□ -1.11
FAM228B-207ENST00000611917 TRBV24-1A0A075B6N3 115 aa8.1□□□□□ -1.11
FAM228B-207ENST00000611917 C7orf77A4D0Y5 90 aa8.1□□□□□ -1.11
FAM228B-207ENST00000611917 CCL25O15444 150 aa8.1□□□□□ -1.11
FAM228B-207ENST00000611917 HAMPP81172 84 aa8.1□□□□□ -1.11
FAM228B-207ENST00000611917 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
FAM228B-207ENST00000611917 MRPL52Q86TS9 123 aaKnown RBP8.1□□□□□ -1.11
FAM228B-207ENST00000611917 CHCHD10Q8WYQ3 142 aaPredicted RBP8.1□□□□□ -1.11
FAM228B-207ENST00000611917 RPL32P62910 135 aaKnown RBP8.09□□□□□ -1.11
FAM228B-207ENST00000611917 CLLU1Q5K131 121 aa8.09□□□□□ -1.11
FAM228B-207ENST00000611917 ATP5L2Q7Z4Y8 100 aa8.09□□□□□ -1.11
FAM228B-207ENST00000611917 ZNF664Q8N3J9 261 aa8.09□□□□□ -1.11
FAM228B-207ENST00000611917 NRACQ8N912 160 aa8.09□□□□□ -1.11
FAM228B-207ENST00000611917 CDC42SE2Q9NRR3 84 aa8.09□□□□□ -1.11
FAM228B-207ENST00000611917 LINC00959A0A1B0GUT2 108 aa8.08□□□□□ -1.12
FAM228B-207ENST00000611917 PHOX2AO14813 284 aa8.08□□□□□ -1.12
FAM228B-207ENST00000611917 TNFRSF6BO95407 300 aa8.08□□□□□ -1.12
FAM228B-207ENST00000611917 CNBPP62633 177 aaKnown RBP8.08□□□□□ -1.12
FAM228B-207ENST00000611917 CSDC2Q9Y534 153 aaKnown RBP8.08□□□□□ -1.12
FAM228B-207ENST00000611917 IGHV3-64A0A075B6Q5 118 aa8.07□□□□□ -1.12
FAM228B-207ENST00000611917 C1orf196B1AJZ1 125 aa8.07□□□□□ -1.12
FAM228B-207ENST00000611917 SDIM1Q6ZPB5 146 aa8.07□□□□□ -1.12
FAM228B-207ENST00000611917 TMEM136Q6ZRR5 245 aa8.07□□□□□ -1.12
FAM228B-207ENST00000611917 CIRBP-AS1Q8TBR5 109 aa8.07□□□□□ -1.12
FAM228B-207ENST00000611917 HSPG2P98160 4391 aa8.07□□□□□ -1.12
FAM228B-207ENST00000611917 D6R8Y8 96 aa8.06□□□□□ -1.12
FAM228B-207ENST00000611917 RAB5AP20339 215 aa8.06□□□□□ -1.12
FAM228B-207ENST00000611917 XCL1P47992 114 aa8.06□□□□□ -1.12
FAM228B-207ENST00000611917 UQCC3Q6UW78 93 aa8.06□□□□□ -1.12
FAM228B-207ENST00000611917 CD164L2Q6UWJ8 174 aa8.06□□□□□ -1.12
FAM228B-207ENST00000611917 SCXQ7RTU7 201 aa8.06□□□□□ -1.12
FAM228B-207ENST00000611917 ORMDL3Q8N138 153 aa8.06□□□□□ -1.12
FAM228B-207ENST00000611917 LINC00528Q8N1L1 170 aa8.06□□□□□ -1.12
FAM228B-207ENST00000611917 IGHV1-58A0A0C4DH39 117 aa8.05□□□□□ -1.12
FAM228B-207ENST00000611917 A0A1B0GXF2 115 aa8.05□□□□□ -1.12
FAM228B-207ENST00000611917 TIMM21Q9BVV7 248 aa8.05□□□□□ -1.12
FAM228B-207ENST00000611917 APOBP04114 4563 aaKnown RBP8.05□□□□□ -1.12
FAM228B-207ENST00000611917 FOXI1Q12951 378 aa8.04□□□□□ -1.12
FAM228B-207ENST00000611917 PRELID3AQ96N28 172 aa8.04□□□□□ -1.12
FAM228B-207ENST00000611917 PKIGQ9Y2B9 76 aa8.04□□□□□ -1.12
FAM228B-207ENST00000611917 ZNF561-AS1K7EIQ3 104 aa8.03□□□□□ -1.12
FAM228B-207ENST00000611917 MALP21145 153 aa8.03□□□□□ -1.12
FAM228B-207ENST00000611917 IMMP2LQ96T52 175 aa8.03□□□□□ -1.12
FAM228B-207ENST00000611917 SMIM2Q9BVW6 85 aa8.03□□□□□ -1.12
FAM228B-207ENST00000611917 CTDSP1Q9GZU7 261 aa8.03□□□□□ -1.12
FAM228B-207ENST00000611917 LAMTOR2Q9Y2Q5 125 aa8.03□□□□□ -1.12
FAM228B-207ENST00000611917 UBE2D4Q9Y2X8 147 aa8.03□□□□□ -1.12
FAM228B-207ENST00000611917 TMEM218A2RU14 115 aa8.02□□□□□ -1.13
FAM228B-207ENST00000611917 SLPIP03973 132 aa8.02□□□□□ -1.13
FAM228B-207ENST00000611917 HIGD2BQ4VC39 106 aa8.02□□□□□ -1.13
FAM228B-207ENST00000611917 C15orf56Q8N910 161 aa8.02□□□□□ -1.13
FAM228B-207ENST00000611917 GVQW2A0A096LPI5 108 aaPredicted RBP8.01□□□□□ -1.13
FAM228B-207ENST00000611917 TRAV13-1A0A0B4J241 112 aa8.01□□□□□ -1.13
FAM228B-207ENST00000611917 PRSS47A8MTI9 375 aa8.01□□□□□ -1.13
FAM228B-207ENST00000611917 COX7A2LO14548 114 aa8.01□□□□□ -1.13
FAM228B-207ENST00000611917 APOMO95445 188 aa8.01□□□□□ -1.13
FAM228B-207ENST00000611917 NPYP01303 97 aa8.01□□□□□ -1.13
FAM228B-207ENST00000611917 SPANXA1Q9NS26 97 aa8.01□□□□□ -1.13
FAM228B-207ENST00000611917 PCLOQ9Y6V0 5065 aa8□□□□□ -1.13
FAM228B-207ENST00000611917 G0S2P27469 103 aa8□□□□□ -1.13
FAM228B-207ENST00000611917 MAP1LC3AQ9H492 121 aa8□□□□□ -1.13
FAM228B-207ENST00000611917 LOC389332A0A1B0GUA5 103 aa7.99□□□□□ -1.13
FAM228B-207ENST00000611917 S100PP25815 95 aa7.99□□□□□ -1.13
FAM228B-207ENST00000611917 MRPS36P82909 103 aaKnown RBP7.99□□□□□ -1.13
FAM228B-207ENST00000611917 IFITM2Q01629 132 aa7.99□□□□□ -1.13
FAM228B-207ENST00000611917 COX6A2Q02221 97 aa7.99□□□□□ -1.13
FAM228B-207ENST00000611917 LINC00474Q9P2X8 69 aa7.99□□□□□ -1.13
FAM228B-207ENST00000611917 IFI27P40305 119 aaPredicted RBP7.98□□□□□ -1.13
FAM228B-207ENST00000611917 RPL39P62891 51 aaKnown RBP7.98□□□□□ -1.13
FAM228B-207ENST00000611917 SEC11CQ9BY50 192 aa7.98□□□□□ -1.13
FAM228B-207ENST00000611917 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.98□□□□□ -1.13
FAM228B-207ENST00000611917 TRAV9-1A0A075B6T8 112 aa7.97□□□□□ -1.13
FAM228B-207ENST00000611917 K7EMI3 77 aa7.97□□□□□ -1.13
FAM228B-207ENST00000611917 RPL37AP61513 92 aaKnown RBP7.97□□□□□ -1.13
FAM228B-207ENST00000611917 SYCNQ0VAF6 134 aa7.97□□□□□ -1.13
FAM228B-207ENST00000611917 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
FAM228B-207ENST00000611917 ORMDL2Q53FV1 153 aa7.97□□□□□ -1.13
FAM228B-207ENST00000611917 RNASE13Q5GAN3 156 aaKnown RBP7.97□□□□□ -1.13
FAM228B-207ENST00000611917 C5orf38Q86SI9 138 aa7.97□□□□□ -1.13
FAM228B-207ENST00000611917 Q8N8P6 123 aa7.97□□□□□ -1.13
FAM228B-207ENST00000611917 PYGO1Q9Y3Y4 419 aa7.97□□□□□ -1.13
FAM228B-207ENST00000611917 ABCA13Q86UQ4 5058 aa7.97□□□□□ -1.13
FAM228B-207ENST00000611917 A0A087WYN8 130 aa7.96□□□□□ -1.14
FAM228B-207ENST00000611917 J3QL48 77 aa7.96□□□□□ -1.14
FAM228B-207ENST00000611917 MAJINQ3KP22 176 aa7.96□□□□□ -1.14
FAM228B-207ENST00000611917 Q6ZUT4 128 aa7.96□□□□□ -1.14
FAM228B-207ENST00000611917 PRSS3P2Q8NHM4 247 aa7.96□□□□□ -1.14
FAM228B-207ENST00000611917 CARD19Q96LW7 228 aa7.96□□□□□ -1.14
FAM228B-207ENST00000611917 NXT2Q9NPJ8 142 aaKnown RBP7.96□□□□□ -1.14
FAM228B-207ENST00000611917 F8WDY8 70 aa7.95□□□□□ -1.14
FAM228B-207ENST00000611917 COX19Q49B96 90 aa7.95□□□□□ -1.14
FAM228B-207ENST00000611917 C7orf33Q8WU49 177 aa7.95□□□□□ -1.14
FAM228B-207ENST00000611917 C2orf48Q96LS8 159 aa7.95□□□□□ -1.14
FAM228B-207ENST00000611917 IGLV4-69A0A075B6H9 119 aa7.94□□□□□ -1.14
FAM228B-207ENST00000611917 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
FAM228B-207ENST00000611917 IFITM10A6NMD0 228 aa7.94□□□□□ -1.14
FAM228B-207ENST00000611917 PANO1I0J062 215 aa7.94□□□□□ -1.14
FAM228B-207ENST00000611917 Q6ZN92 141 aa7.94□□□□□ -1.14
FAM228B-207ENST00000611917 COMMD7Q86VX2 200 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms