RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 TMEM136Q6ZRR5 245 aa8.35□□□□□ -1.07
SNX20-205ENST00000610485 MYCBP2O75592 4640 aa8.34□□□□□ -1.07
SNX20-205ENST00000610485 SDHAF1A6NFY7 115 aa8.34□□□□□ -1.07
SNX20-205ENST00000610485 PLA2G1BP04054 148 aaKnown RBP8.34□□□□□ -1.07
SNX20-205ENST00000610485 FABP9Q0Z7S8 132 aa8.34□□□□□ -1.07
SNX20-205ENST00000610485 C9orf163Q8N9P6 203 aa8.34□□□□□ -1.07
SNX20-205ENST00000610485 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
SNX20-205ENST00000610485 TMEM191AQ9H0A3 160 aa8.34□□□□□ -1.07
SNX20-205ENST00000610485 MRPL18Q9H0U6 180 aaKnown RBP8.34□□□□□ -1.07
SNX20-205ENST00000610485 HERC1Q15751 4861 aa8.34□□□□□ -1.08
SNX20-205ENST00000610485 SRRM2Q9UQ35 2752 aaKnown RBP8.33□□□□□ -1.08
SNX20-205ENST00000610485 H7C423 109 aa8.33□□□□□ -1.08
SNX20-205ENST00000610485 APCSP02743 223 aa8.33□□□□□ -1.08
SNX20-205ENST00000610485 TMA7Q9Y2S6 64 aaKnown RBP8.33□□□□□ -1.08
SNX20-205ENST00000610485 I3L3M4 83 aa8.32□□□□□ -1.08
SNX20-205ENST00000610485 GAS8-AS1O95177 125 aa8.32□□□□□ -1.08
SNX20-205ENST00000610485 RAB5BP61020 215 aa8.32□□□□□ -1.08
SNX20-205ENST00000610485 RNF185Q96GF1 192 aa8.32□□□□□ -1.08
SNX20-205ENST00000610485 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.31□□□□□ -1.08
SNX20-205ENST00000610485 IGKV2-29A2NJV5 120 aaPredicted RBP8.31□□□□□ -1.08
SNX20-205ENST00000610485 RAB4AP20338 218 aa8.31□□□□□ -1.08
SNX20-205ENST00000610485 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
SNX20-205ENST00000610485 AMMECR1LQ6DCA0 310 aa8.31□□□□□ -1.08
SNX20-205ENST00000610485 MRAP2Q96G30 205 aa8.31□□□□□ -1.08
SNX20-205ENST00000610485 TSHBP01222 138 aa8.3□□□□□ -1.08
SNX20-205ENST00000610485 FGF6P10767 208 aa8.3□□□□□ -1.08
SNX20-205ENST00000610485 ESDP10768 282 aa8.3□□□□□ -1.08
SNX20-205ENST00000610485 ZNF25P17030 456 aaPredicted RBP8.3□□□□□ -1.08
SNX20-205ENST00000610485 PMCHP20382 165 aa8.3□□□□□ -1.08
SNX20-205ENST00000610485 KIAA1644Q3SXP7 199 aa8.3□□□□□ -1.08
SNX20-205ENST00000610485 AMN1Q8IY45 258 aa8.3□□□□□ -1.08
SNX20-205ENST00000610485 ST20Q9HBF5 79 aa8.3□□□□□ -1.08
SNX20-205ENST00000610485 TRBV27A0A0K0K1C4 114 aa8.29□□□□□ -1.08
SNX20-205ENST00000610485 hDV102S1A0JD36 115 aa8.29□□□□□ -1.08
SNX20-205ENST00000610485 GAGE12HA6NDE8 117 aa8.29□□□□□ -1.08
SNX20-205ENST00000610485 PHOX2AO14813 284 aa8.29□□□□□ -1.08
SNX20-205ENST00000610485 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
SNX20-205ENST00000610485 KRTAP10-4P60372 401 aaPredicted RBP8.29□□□□□ -1.08
SNX20-205ENST00000610485 FAM104BQ5XKR9 115 aa8.29□□□□□ -1.08
SNX20-205ENST00000610485 RNASEKQ6P5S7 137 aaKnown RBP8.29□□□□□ -1.08
SNX20-205ENST00000610485 SDIM1Q6ZPB5 146 aa8.29□□□□□ -1.08
SNX20-205ENST00000610485 C15orf56Q8N910 161 aa8.28□□□□□ -1.08
SNX20-205ENST00000610485 CHCHD10Q8WYQ3 142 aaPredicted RBP8.28□□□□□ -1.08
SNX20-205ENST00000610485 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
SNX20-205ENST00000610485 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 PANO1I0J062 215 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST1H2BKO60814 126 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 SLPIP03973 132 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST1H2BJP06899 126 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST1H2BOP23527 126 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST1H2BBP33778 126 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST1H2BDP58876 126 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST1H2BCP62807 126 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST2H2BEQ16778 126 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 MRPL51Q4U2R6 128 aaKnown RBP8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.27□□□□□ -1.09
SNX20-205ENST00000610485 OR5A1Q8NGJ0 315 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST1H2BHQ93079 126 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST1H2BNQ99877 126 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 HIST1H2BMQ99879 126 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 AP5S1Q9NUS5 200 aa8.27□□□□□ -1.09
SNX20-205ENST00000610485 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.26□□□□□ -1.09
SNX20-205ENST00000610485 SMKR1H3BMG3 65 aa8.26□□□□□ -1.09
SNX20-205ENST00000610485 PPP1R17O96001 155 aa8.26□□□□□ -1.09
SNX20-205ENST00000610485 CIRBPQ14011 172 aaKnown RBP8.26□□□□□ -1.09
SNX20-205ENST00000610485 CFAP161Q6P656 301 aa8.26□□□□□ -1.09
SNX20-205ENST00000610485 MRPL52Q86TS9 123 aaKnown RBP8.26□□□□□ -1.09
SNX20-205ENST00000610485 NRACQ8N912 160 aa8.26□□□□□ -1.09
SNX20-205ENST00000610485 TMEM101Q96IK0 257 aa8.26□□□□□ -1.09
SNX20-205ENST00000610485 IGHV3-64A0A075B6Q5 118 aa8.25□□□□□ -1.09
SNX20-205ENST00000610485 VCYO14598 125 aa8.25□□□□□ -1.09
SNX20-205ENST00000610485 S100A6P06703 90 aa8.25□□□□□ -1.09
SNX20-205ENST00000610485 CKS2P33552 79 aa8.25□□□□□ -1.09
SNX20-205ENST00000610485 NDUFA6P56556 154 aa8.25□□□□□ -1.09
SNX20-205ENST00000610485 FOXI1Q12951 378 aa8.25□□□□□ -1.09
SNX20-205ENST00000610485 ALKBH7Q9BT30 221 aaPredicted RBP8.25□□□□□ -1.09
SNX20-205ENST00000610485 LINC00959A0A1B0GUT2 108 aa8.24□□□□□ -1.09
SNX20-205ENST00000610485 D6R8Y8 96 aa8.24□□□□□ -1.09
SNX20-205ENST00000610485 PPBPP02775 128 aa8.24□□□□□ -1.09
SNX20-205ENST00000610485 SUMO2P61956 95 aaKnown RBP8.24□□□□□ -1.09
SNX20-205ENST00000610485 ORMDL3Q8N138 153 aa8.24□□□□□ -1.09
SNX20-205ENST00000610485 PRELID3AQ96N28 172 aa8.24□□□□□ -1.09
SNX20-205ENST00000610485 CDC42SE2Q9NRR3 84 aa8.24□□□□□ -1.09
SNX20-205ENST00000610485 GVQW2A0A096LPI5 108 aaPredicted RBP8.23□□□□□ -1.09
SNX20-205ENST00000610485 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
SNX20-205ENST00000610485 HIGD2BQ4VC39 106 aa8.23□□□□□ -1.09
SNX20-205ENST00000610485 CCL25O15444 150 aa8.22□□□□□ -1.09
SNX20-205ENST00000610485 FCER1GP30273 86 aa8.22□□□□□ -1.09
SNX20-205ENST00000610485 XCL1P47992 114 aa8.22□□□□□ -1.09
SNX20-205ENST00000610485 RPL37AP61513 92 aaKnown RBP8.22□□□□□ -1.09
SNX20-205ENST00000610485 BAGE3Q86Y29 109 aa8.22□□□□□ -1.09
SNX20-205ENST00000610485 ZNF664Q8N3J9 261 aa8.22□□□□□ -1.09
SNX20-205ENST00000610485 DMBT1Q9UGM3 2413 aaPredicted RBP8.22□□□□□ -1.09
SNX20-205ENST00000610485 FLG2Q5D862 2391 aaPredicted RBP8.21□□□□□ -1.09
SNX20-205ENST00000610485 J3QL48 77 aa8.21□□□□□ -1.1
SNX20-205ENST00000610485 RPL32P62910 135 aaKnown RBP8.21□□□□□ -1.1
SNX20-205ENST00000610485 C18orf32Q8TCD1 76 aa8.21□□□□□ -1.1
SNX20-205ENST00000610485 SPACA4Q8TDM5 124 aa8.21□□□□□ -1.1
SNX20-205ENST00000610485 KIR2DL4Q99706 377 aa8.21□□□□□ -1.1
SNX20-205ENST00000610485 C20orf78Q9BR46 151 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms