RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 YPEL4Q96NS1 127 aa9.37□□□□□ -0.91
CTSA-216ENST00000607212 RPP21Q9H633 154 aaKnown RBP9.37□□□□□ -0.91
CTSA-216ENST00000607212 MT-ND4LP03901 98 aa9.36□□□□□ -0.91
CTSA-216ENST00000607212 FGF6P10767 208 aa9.36□□□□□ -0.91
CTSA-216ENST00000607212 PMCHP20382 165 aa9.36□□□□□ -0.91
CTSA-216ENST00000607212 XCL1P47992 114 aa9.36□□□□□ -0.91
CTSA-216ENST00000607212 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
CTSA-216ENST00000607212 PKIGQ9Y2B9 76 aa9.36□□□□□ -0.91
CTSA-216ENST00000607212 NCR2O95944 276 aa9.35□□□□□ -0.91
CTSA-216ENST00000607212 RNASE7Q9H1E1 156 aaKnown RBP9.35□□□□□ -0.91
CTSA-216ENST00000607212 TRBV20OR9-2A0A075B6H5 130 aa9.34□□□□□ -0.91
CTSA-216ENST00000607212 A0A096LNI7 61 aa9.34□□□□□ -0.91
CTSA-216ENST00000607212 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
CTSA-216ENST00000607212 H7C423 109 aa9.34□□□□□ -0.91
CTSA-216ENST00000607212 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
CTSA-216ENST00000607212 SDHAF1A6NFY7 115 aa9.33□□□□□ -0.92
CTSA-216ENST00000607212 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
CTSA-216ENST00000607212 ISOC2Q96AB3 205 aa9.33□□□□□ -0.92
CTSA-216ENST00000607212 LINC00526Q96FQ7 95 aa9.33□□□□□ -0.92
CTSA-216ENST00000607212 CARD19Q96LW7 228 aa9.33□□□□□ -0.92
CTSA-216ENST00000607212 IGHV1-58A0A0C4DH39 117 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 ZNF727A8MUV8 499 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 C1orf196B1AJZ1 125 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 I3L3M4 83 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 CCL25O15444 150 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 RAB5AP20339 215 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 TAGLN2P37802 199 aaKnown RBP9.32□□□□□ -0.92
CTSA-216ENST00000607212 CEBPGP53567 150 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 FOXI1Q12951 378 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 OR5A1Q8NGJ0 315 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 BORCS7Q96B45 105 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 LINC01600Q96MT4 127 aa9.32□□□□□ -0.92
CTSA-216ENST00000607212 ZNF561-AS1K7EIQ3 104 aa9.31□□□□□ -0.92
CTSA-216ENST00000607212 GATCO43716 136 aaKnown RBP9.31□□□□□ -0.92
CTSA-216ENST00000607212 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
CTSA-216ENST00000607212 FOXA3P55318 350 aaPredicted RBP9.31□□□□□ -0.92
CTSA-216ENST00000607212 RAB5BP61020 215 aa9.31□□□□□ -0.92
CTSA-216ENST00000607212 SS18Q15532 418 aa9.31□□□□□ -0.92
CTSA-216ENST00000607212 CNFNQ9BYD5 112 aa9.31□□□□□ -0.92
CTSA-216ENST00000607212 ODF1Q14990 250 aa9.3□□□□□ -0.92
CTSA-216ENST00000607212 SPINK6Q6UWN8 80 aa9.3□□□□□ -0.92
CTSA-216ENST00000607212 LINC00518Q8N0U6 118 aa9.3□□□□□ -0.92
CTSA-216ENST00000607212 OCC1Q8TAD7 63 aa9.3□□□□□ -0.92
CTSA-216ENST00000607212 MRAP2Q96G30 205 aa9.3□□□□□ -0.92
CTSA-216ENST00000607212 LINC00959A0A1B0GUT2 108 aa9.29□□□□□ -0.92
CTSA-216ENST00000607212 K7EN84 100 aa9.29□□□□□ -0.92
CTSA-216ENST00000607212 PNRC1Q12796 327 aaPredicted RBP9.29□□□□□ -0.92
CTSA-216ENST00000607212 GAGE2BQ13066 116 aa9.29□□□□□ -0.92
CTSA-216ENST00000607212 ST20Q9HBF5 79 aa9.29□□□□□ -0.92
CTSA-216ENST00000607212 TMEM242Q9NWH2 141 aa9.29□□□□□ -0.92
CTSA-216ENST00000607212 A0A0J9YXV3 536 aa9.28□□□□□ -0.92
CTSA-216ENST00000607212 MALP21145 153 aa9.28□□□□□ -0.92
CTSA-216ENST00000607212 SYCNQ0VAF6 134 aa9.28□□□□□ -0.92
CTSA-216ENST00000607212 Q6ZRP5 223 aa9.28□□□□□ -0.92
CTSA-216ENST00000607212 C5orf52A6NGY3 159 aa9.27□□□□□ -0.93
CTSA-216ENST00000607212 A8MWL6 223 aa9.27□□□□□ -0.93
CTSA-216ENST00000607212 TMEM250H0YL14 139 aa9.27□□□□□ -0.93
CTSA-216ENST00000607212 CAMPP49913 170 aa9.26□□□□□ -0.93
CTSA-216ENST00000607212 SNRPEP62304 92 aaKnown RBP9.26□□□□□ -0.93
CTSA-216ENST00000607212 NAT8Q9UHE5 227 aa9.26□□□□□ -0.93
CTSA-216ENST00000607212 TGIF2-C20orf24A0A0A6YYL0 155 aa9.25□□□□□ -0.93
CTSA-216ENST00000607212 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
CTSA-216ENST00000607212 FAM231BA6NCW3 169 aa9.25□□□□□ -0.93
CTSA-216ENST00000607212 TSHBP01222 138 aa9.25□□□□□ -0.93
CTSA-216ENST00000607212 FCER1GP30273 86 aa9.25□□□□□ -0.93
CTSA-216ENST00000607212 TMEM241Q24JQ0 296 aa9.25□□□□□ -0.93
CTSA-216ENST00000607212 CD164L2Q6UWJ8 174 aa9.25□□□□□ -0.93
CTSA-216ENST00000607212 SMIM7Q9BQ49 75 aa9.25□□□□□ -0.93
CTSA-216ENST00000607212 CTDSP1Q9GZU7 261 aa9.25□□□□□ -0.93
CTSA-216ENST00000607212 AKR1D1P51857 326 aa9.24□□□□□ -0.93
CTSA-216ENST00000607212 RPL23P62829 140 aaKnown RBP9.24□□□□□ -0.93
CTSA-216ENST00000607212 ZNF664Q8N3J9 261 aa9.24□□□□□ -0.93
CTSA-216ENST00000607212 TNXBP22105 4242 aa9.23□□□□□ -0.93
CTSA-216ENST00000607212 IGLV4-69A0A075B6H9 119 aa9.23□□□□□ -0.93
CTSA-216ENST00000607212 TRBV6-5A0A0K0K1A5 114 aa9.23□□□□□ -0.93
CTSA-216ENST00000607212 GAS8-AS1O95177 125 aa9.23□□□□□ -0.93
CTSA-216ENST00000607212 ESDP10768 282 aa9.23□□□□□ -0.93
CTSA-216ENST00000607212 PTTG1IPP53801 180 aa9.23□□□□□ -0.93
CTSA-216ENST00000607212 CAMK2N2Q96S95 79 aa9.23□□□□□ -0.93
CTSA-216ENST00000607212 CDC42SE2Q9NRR3 84 aa9.23□□□□□ -0.93
CTSA-216ENST00000607212 COX7A2LO14548 114 aa9.22□□□□□ -0.93
CTSA-216ENST00000607212 MT-ND6P03923 174 aa9.22□□□□□ -0.93
CTSA-216ENST00000607212 RPL18AQ02543 176 aaKnown RBP9.22□□□□□ -0.93
CTSA-216ENST00000607212 SMAGPQ0VAQ4 97 aa9.22□□□□□ -0.93
CTSA-216ENST00000607212 ADIRFQ15847 76 aa9.22□□□□□ -0.93
CTSA-216ENST00000607212 TRBV24-1A0A075B6N3 115 aa9.21□□□□□ -0.94
CTSA-216ENST00000607212 A0A1B0GUT8 65 aa9.21□□□□□ -0.94
CTSA-216ENST00000607212 S100A6P06703 90 aa9.21□□□□□ -0.94
CTSA-216ENST00000607212 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.94
CTSA-216ENST00000607212 FAM231DQ6ZW35 169 aa9.21□□□□□ -0.94
CTSA-216ENST00000607212 TRAV13-1A0A0B4J241 112 aa9.2□□□□□ -0.94
CTSA-216ENST00000607212 HIGD1CA8MV81 97 aa9.2□□□□□ -0.94
CTSA-216ENST00000607212 KRTAP10-8P60410 259 aa9.2□□□□□ -0.94
CTSA-216ENST00000607212 FABP9Q0Z7S8 132 aa9.2□□□□□ -0.94
CTSA-216ENST00000607212 CT83Q5H943 113 aa9.2□□□□□ -0.94
CTSA-216ENST00000607212 MRPL52Q86TS9 123 aaKnown RBP9.2□□□□□ -0.94
CTSA-216ENST00000607212 AMN1Q8IY45 258 aa9.2□□□□□ -0.94
CTSA-216ENST00000607212 TMEM191AQ9H0A3 160 aa9.2□□□□□ -0.94
CTSA-216ENST00000607212 LRP2P98164 4655 aa9.2□□□□□ -0.94
CTSA-216ENST00000607212 RNF213Q63HN8 5207 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms