RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 RIMS1Q86UR5 1692 aaKnown RBP-0.69□□□□□ -2.52
RNU6-88P-201ENST00000606801 CHD8Q9HCK8 2581 aa-0.69□□□□□ -2.52
RNU6-88P-201ENST00000606801 ACANP16112 2415 aa-0.69□□□□□ -2.52
RNU6-88P-201ENST00000606801 ARPC4P59998 168 aa-0.69□□□□□ -2.52
RNU6-88P-201ENST00000606801 LINC00472Q9H8W2 130 aa-0.69□□□□□ -2.52
RNU6-88P-201ENST00000606801 BTAF1O14981 1849 aa-0.69□□□□□ -2.52
RNU6-88P-201ENST00000606801 EP300Q09472 2414 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-88P-201ENST00000606801 PPIP5K1Q6PFW1 1433 aa-0.7□□□□□ -2.52
RNU6-88P-201ENST00000606801 DSTQ03001 7570 aaKnown RBP-0.7□□□□□ -2.52
RNU6-88P-201ENST00000606801 MUC2Q02817 5179 aa-0.7□□□□□ -2.52
RNU6-88P-201ENST00000606801 CTXND1A0A1B0GTU2 59 aa-0.7□□□□□ -2.52
RNU6-88P-201ENST00000606801 Q6AWC8 147 aa-0.71□□□□□ -2.52
RNU6-88P-201ENST00000606801 SPAG11AQ6PDA7 123 aa-0.71□□□□□ -2.52
RNU6-88P-201ENST00000606801 TTC9CQ8N5M4 171 aa-0.71□□□□□ -2.52
RNU6-88P-201ENST00000606801 SMIM4Q8WVI0 70 aa-0.71□□□□□ -2.52
RNU6-88P-201ENST00000606801 AQP10Q96PS8 301 aa-0.71□□□□□ -2.52
RNU6-88P-201ENST00000606801 TP53AIP1Q9HCN2 124 aa-0.71□□□□□ -2.52
RNU6-88P-201ENST00000606801 V9GYH0 126 aa-0.71□□□□□ -2.52
RNU6-88P-201ENST00000606801 SRRM2Q9UQ35 2752 aaKnown RBP-0.72□□□□□ -2.52
RNU6-88P-201ENST00000606801 RERGLQ9H628 205 aa-0.73□□□□□ -2.53
RNU6-88P-201ENST00000606801 SERP1Q9Y6X1 66 aa-0.73□□□□□ -2.53
RNU6-88P-201ENST00000606801 ROBO1Q9Y6N7 1651 aa-0.73□□□□□ -2.53
RNU6-88P-201ENST00000606801 MBD5Q9P267 1494 aa-0.73□□□□□ -2.53
RNU6-88P-201ENST00000606801 COL6A3P12111 3177 aa-0.73□□□□□ -2.53
RNU6-88P-201ENST00000606801 ANKRD17O75179 2603 aaKnown RBP-0.74□□□□□ -2.53
RNU6-88P-201ENST00000606801 KDM5AP29375 1690 aaKnown RBP-0.74□□□□□ -2.53
RNU6-88P-201ENST00000606801 QRICH2Q9H0J4 1663 aa-0.74□□□□□ -2.53
RNU6-88P-201ENST00000606801 DNAJC13O75165 2243 aa-0.74□□□□□ -2.53
RNU6-88P-201ENST00000606801 C12orf73Q69YU5 71 aa-0.74□□□□□ -2.53
RNU6-88P-201ENST00000606801 SNRNP25Q9BV90 132 aaKnown RBP-0.74□□□□□ -2.53
RNU6-88P-201ENST00000606801 NDUFA4L2Q9NRX3 87 aa-0.74□□□□□ -2.53
RNU6-88P-201ENST00000606801 PRKDCP78527 4128 aaKnown RBP-0.75□□□□□ -2.53
RNU6-88P-201ENST00000606801 LINC00470Q9BZP3 86 aa-0.75□□□□□ -2.53
RNU6-88P-201ENST00000606801 PAIP2BQ9ULR5 123 aaKnown RBP-0.75□□□□□ -2.53
RNU6-88P-201ENST00000606801 TMEM170BQ5T4T1 132 aa-0.76□□□□□ -2.53
RNU6-88P-201ENST00000606801 ARHGEF5Q12774 1597 aa-0.76□□□□□ -2.53
RNU6-88P-201ENST00000606801 SETXQ7Z333 2677 aaKnown RBP-0.76□□□□□ -2.53
RNU6-88P-201ENST00000606801 FLNBO75369 2602 aaKnown RBP-0.77□□□□□ -2.53
RNU6-88P-201ENST00000606801 MYOM1P52179 1685 aa-0.77□□□□□ -2.53
RNU6-88P-201ENST00000606801 NDUFA2O43678 99 aa-0.77□□□□□ -2.53
RNU6-88P-201ENST00000606801 GNG7O60262 68 aa-0.77□□□□□ -2.53
RNU6-88P-201ENST00000606801 Q6JHZ5 121 aa-0.77□□□□□ -2.53
RNU6-88P-201ENST00000606801 COPS9Q8WXC6 57 aa-0.77□□□□□ -2.53
RNU6-88P-201ENST00000606801 TSLPQ969D9 159 aa-0.77□□□□□ -2.53
RNU6-88P-201ENST00000606801 FXYD6-FXYD2A0A087WZ82 144 aa-0.78□□□□□ -2.53
RNU6-88P-201ENST00000606801 COX17Q14061 63 aa-0.78□□□□□ -2.53
RNU6-88P-201ENST00000606801 MEIG1Q5JSS6 88 aa-0.78□□□□□ -2.53
RNU6-88P-201ENST00000606801 ARL11Q969Q4 196 aa-0.78□□□□□ -2.53
RNU6-88P-201ENST00000606801 CPSF1Q10570 1443 aaKnown RBP-0.79□□□□□ -2.54
RNU6-88P-201ENST00000606801 PIGBOS1A0A0B4J2F0 54 aa-0.79□□□□□ -2.54
RNU6-88P-201ENST00000606801 TRBV6-1A0A0K0K1D8 114 aa-0.79□□□□□ -2.54
RNU6-88P-201ENST00000606801 SELENOWP63302 87 aa-0.79□□□□□ -2.54
RNU6-88P-201ENST00000606801 DCDP81605 110 aaKnown RBP-0.79□□□□□ -2.54
RNU6-88P-201ENST00000606801 BAGE2Q86Y30 109 aa-0.79□□□□□ -2.54
RNU6-88P-201ENST00000606801 ZFHX3Q15911 3703 aa-0.8□□□□□ -2.54
RNU6-88P-201ENST00000606801 TRBV7-3A0A075B6L6 115 aa-0.8□□□□□ -2.54
RNU6-88P-201ENST00000606801 LOC100130705A0A1B0GUX0 176 aa-0.8□□□□□ -2.54
RNU6-88P-201ENST00000606801 F8VRH5 84 aa-0.8□□□□□ -2.54
RNU6-88P-201ENST00000606801 S100A3P33764 101 aa-0.8□□□□□ -2.54
RNU6-88P-201ENST00000606801 RAPGEF6Q8TEU7 1601 aa-0.81□□□□□ -2.54
RNU6-88P-201ENST00000606801 IGLC7A0M8Q6 106 aa-0.81□□□□□ -2.54
RNU6-88P-201ENST00000606801 UQCR11O14957 56 aa-0.81□□□□□ -2.54
RNU6-88P-201ENST00000606801 MGST2Q99735 147 aa-0.81□□□□□ -2.54
RNU6-88P-201ENST00000606801 NAA60Q9H7X0 242 aa-0.81□□□□□ -2.54
RNU6-88P-201ENST00000606801 DYNLRB1Q9NP97 96 aa-0.81□□□□□ -2.54
RNU6-88P-201ENST00000606801 LRP1BQ9NZR2 4599 aa-0.81□□□□□ -2.54
RNU6-88P-201ENST00000606801 MIF4GDA9UHW6 222 aaKnown RBP-0.82□□□□□ -2.54
RNU6-88P-201ENST00000606801 FAM25AB3EWG3 89 aa-0.82□□□□□ -2.54
RNU6-88P-201ENST00000606801 FAM25CB3EWG5 89 aa-0.82□□□□□ -2.54
RNU6-88P-201ENST00000606801 FAM25GB3EWG6 89 aa-0.82□□□□□ -2.54
RNU6-88P-201ENST00000606801 K7EQZ3 153 aa-0.82□□□□□ -2.54
RNU6-88P-201ENST00000606801 BTG2P78543 158 aa-0.82□□□□□ -2.54
RNU6-88P-201ENST00000606801 LINC01558Q9Y6Z2 57 aa-0.82□□□□□ -2.54
RNU6-88P-201ENST00000606801 TET3O43151 1660 aa-0.82□□□□□ -2.54
RNU6-88P-201ENST00000606801 CUL7Q14999 1698 aa-0.82□□□□□ -2.54
RNU6-88P-201ENST00000606801 MAP1AP78559 2803 aaPredicted RBP-0.83□□□□□ -2.54
RNU6-88P-201ENST00000606801 CNOT1A5YKK6 2376 aaKnown RBP-0.83□□□□□ -2.54
RNU6-88P-201ENST00000606801 HMGN4O00479 90 aa-0.83□□□□□ -2.54
RNU6-88P-201ENST00000606801 PIGYQ3MUY2 71 aa-0.83□□□□□ -2.54
RNU6-88P-201ENST00000606801 SPANXDQ9BXN6 97 aa-0.83□□□□□ -2.54
RNU6-88P-201ENST00000606801 Q56UQ5 140 aa-0.84□□□□□ -2.54
RNU6-88P-201ENST00000606801 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.84□□□□□ -2.54
RNU6-88P-201ENST00000606801 NSD3Q9BZ95 1437 aa-0.84□□□□□ -2.54
RNU6-88P-201ENST00000606801 ARHGEF12Q9NZN5 1544 aa-0.84□□□□□ -2.54
RNU6-88P-201ENST00000606801 MUC12Q9UKN1 5478 aa-0.85□□□□□ -2.55
RNU6-88P-201ENST00000606801 SPRR1BP22528 89 aa-0.85□□□□□ -2.55
RNU6-88P-201ENST00000606801 SPRR2BP35325 72 aa-0.85□□□□□ -2.55
RNU6-88P-201ENST00000606801 TPPP2P59282 170 aa-0.85□□□□□ -2.55
RNU6-88P-201ENST00000606801 CATR1Q13166 79 aa-0.85□□□□□ -2.55
RNU6-88P-201ENST00000606801 CCDC58Q4VC31 144 aa-0.85□□□□□ -2.55
RNU6-88P-201ENST00000606801 LINC00474Q9P2X8 69 aa-0.85□□□□□ -2.55
RNU6-88P-201ENST00000606801 STAB2Q8WWQ8 2551 aa-0.85□□□□□ -2.55
RNU6-88P-201ENST00000606801 WDR7Q9Y4E6 1490 aa-0.86□□□□□ -2.55
RNU6-88P-201ENST00000606801 APOC3P02656 99 aa-0.86□□□□□ -2.55
RNU6-88P-201ENST00000606801 DEFB123Q8N688 67 aa-0.86□□□□□ -2.55
RNU6-88P-201ENST00000606801 PPP3R2Q96LZ3 170 aa-0.86□□□□□ -2.55
RNU6-88P-201ENST00000606801 SCN7AQ01118 1682 aa-0.87□□□□□ -2.55
RNU6-88P-201ENST00000606801 TULP4Q9NRJ4 1543 aa-0.88□□□□□ -2.55
RNU6-88P-201ENST00000606801 K7EP13 123 aa-0.88□□□□□ -2.55
RNU6-88P-201ENST00000606801 COX6B1P14854 86 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms