RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 SHROOM2Q13796 1616 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 MYH8P13535 1937 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 MAP1BP46821 2468 aaKnown RBP-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 LRP1BQ9NZR2 4599 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 SMIM6P0DI80 62 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 ARPC4P59998 168 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 SNRNP25Q9BV90 132 aaKnown RBP-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 LINC00470Q9BZP3 86 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 RERGLQ9H628 205 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 CCDC167Q9P0B6 97 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 LINC00474Q9P2X8 69 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 SERP1Q9Y6X1 66 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 V9GYH0 126 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 APC2O95996 2303 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 MYO7BQ6PIF6 2116 aa-0.46□□□□□ -2.48
SNORA28-201ENST00000606769 NSD3Q9BZ95 1437 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 ARHGEF5Q12774 1597 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 TRBV6-1A0A0K0K1D8 114 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 K7EQZ3 153 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 GNG7O60262 68 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 SPRR1BP22528 89 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 Q6JHZ5 121 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 SMIM4Q8WVI0 70 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 AQP10Q96PS8 301 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 QRICH2Q9H0J4 1663 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 ROBO1Q9Y6N7 1651 aa-0.47□□□□□ -2.48
SNORA28-201ENST00000606769 PI4KAP42356 2102 aa-0.47□□□□□ -2.49
SNORA28-201ENST00000606769 ATRQ13535 2644 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 WNK1Q9H4A3 2382 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 EP300Q09472 2414 aaPredicted RBP-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 TRBV7-3A0A075B6L6 115 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 IGLC7A0M8Q6 106 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 MEIG1Q5JSS6 88 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 TMEM170BQ5T4T1 132 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 BAGE2Q86Y30 109 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 DEFB123Q8N688 67 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 PFDN5Q99471 154 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 SPANXDQ9BXN6 97 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 LINC01558Q9Y6Z2 57 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 DOCK2Q92608 1830 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 PIEZO2Q9H5I5 2752 aa-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 CPSF1Q10570 1443 aaKnown RBP-0.48□□□□□ -2.49
SNORA28-201ENST00000606769 SBF2Q86WG5 1849 aa-0.49□□□□□ -2.49
SNORA28-201ENST00000606769 F8VRH5 84 aa-0.49□□□□□ -2.49
SNORA28-201ENST00000606769 HMGN4O00479 90 aa-0.49□□□□□ -2.49
SNORA28-201ENST00000606769 UQCR11O14957 56 aa-0.49□□□□□ -2.49
SNORA28-201ENST00000606769 C12orf73Q69YU5 71 aa-0.49□□□□□ -2.49
SNORA28-201ENST00000606769 DYNLRB1Q9NP97 96 aa-0.49□□□□□ -2.49
SNORA28-201ENST00000606769 PRKDCP78527 4128 aaKnown RBP-0.49□□□□□ -2.49
SNORA28-201ENST00000606769 TULP4Q9NRJ4 1543 aa-0.49□□□□□ -2.49
SNORA28-201ENST00000606769 MYOM1P52179 1685 aa-0.49□□□□□ -2.49
SNORA28-201ENST00000606769 FXYD6-FXYD2A0A087WZ82 144 aa-0.5□□□□□ -2.49
SNORA28-201ENST00000606769 SELENOWP63302 87 aa-0.5□□□□□ -2.49
SNORA28-201ENST00000606769 BTG2P78543 158 aa-0.5□□□□□ -2.49
SNORA28-201ENST00000606769 DCDP81605 110 aaKnown RBP-0.5□□□□□ -2.49
SNORA28-201ENST00000606769 COX17Q14061 63 aa-0.5□□□□□ -2.49
SNORA28-201ENST00000606769 ARL11Q969Q4 196 aa-0.5□□□□□ -2.49
SNORA28-201ENST00000606769 SPRR4Q96PI1 79 aa-0.5□□□□□ -2.49
SNORA28-201ENST00000606769 MGST2Q99735 147 aa-0.5□□□□□ -2.49
SNORA28-201ENST00000606769 TSC2P49815 1807 aa-0.5□□□□□ -2.49
SNORA28-201ENST00000606769 PSME4Q14997 1843 aa-0.5□□□□□ -2.49
SNORA28-201ENST00000606769 OOSP1A8MZH6 123 aa-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 MIF4GDA9UHW6 222 aaKnown RBP-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 K7EP13 123 aa-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 SPTA1P02549 2419 aa-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 COX6B1P14854 86 aa-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 ACANP16112 2415 aa-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 KDM5AP29375 1690 aaKnown RBP-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 SETXQ7Z333 2677 aaKnown RBP-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 NAA60Q9H7X0 242 aa-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 CDC42SE2Q9NRR3 84 aa-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 PAIP2BQ9ULR5 123 aaKnown RBP-0.51□□□□□ -2.49
SNORA28-201ENST00000606769 BTAF1O14981 1849 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 HMGXB3Q12766 1538 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 ARHGEF12Q9NZN5 1544 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 WDR7Q9Y4E6 1490 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 CHD8Q9HCK8 2581 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 LINC00959A0A1B0GUT2 108 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 CATR1Q13166 79 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 PIGYQ3MUY2 71 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 Q56UQ5 140 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 MYOZ3Q8TDC0 251 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 COPS9Q8WXC6 57 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 PDZD2O15018 2839 aa-0.52□□□□□ -2.49
SNORA28-201ENST00000606769 TET3O43151 1660 aa-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 RAPGEF6Q8TEU7 1601 aa-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 MAP1AP78559 2803 aaPredicted RBP-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 FLNBO75369 2602 aaKnown RBP-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 SFT2D2O95562 160 aa-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 TNFP01375 233 aa-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 S100A3P33764 101 aa-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 TPPP2P59282 170 aa-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 KLK9Q2XQG4 91 aa-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 COMMD6Q7Z4G1 85 aa-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 C5orf38Q86SI9 138 aa-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 PPP3R2Q96LZ3 170 aa-0.53□□□□□ -2.49
SNORA28-201ENST00000606769 PKHD1P08F94 4074 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 A2ML1A8K2U0 1454 aa-0.54□□□□□ -2.5
SNORA28-201ENST00000606769 GAPVD1Q14C86 1478 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms