RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 PIGYQ3MUY2 71 aa-0.95□□□□□ -2.56
TUBE1-205ENST00000603651 CCDC153Q494R4 210 aa-0.95□□□□□ -2.56
TUBE1-205ENST00000603651 Q6ZUT4 128 aa-0.95□□□□□ -2.56
TUBE1-205ENST00000603651 LINC00472Q9H8W2 130 aa-0.95□□□□□ -2.56
TUBE1-205ENST00000603651 KDM5AP29375 1690 aaKnown RBP-0.95□□□□□ -2.56
TUBE1-205ENST00000603651 CUBNO60494 3623 aa-0.95□□□□□ -2.56
TUBE1-205ENST00000603651 BICRAQ9NZM4 1560 aa-0.96□□□□□ -2.56
TUBE1-205ENST00000603651 ANK3Q12955 4377 aaKnown RBP-0.96□□□□□ -2.56
TUBE1-205ENST00000603651 IQSEC2Q5JU85 1478 aa-0.96□□□□□ -2.56
TUBE1-205ENST00000603651 PPP1R17O96001 155 aa-0.96□□□□□ -2.56
TUBE1-205ENST00000603651 LINC00694P0DN24 101 aa-0.96□□□□□ -2.56
TUBE1-205ENST00000603651 S100A7L2Q5SY68 101 aa-0.96□□□□□ -2.56
TUBE1-205ENST00000603651 SMIM15Q7Z3B0 74 aa-0.96□□□□□ -2.56
TUBE1-205ENST00000603651 MMGT1Q8N4V1 131 aa-0.96□□□□□ -2.56
TUBE1-205ENST00000603651 SMIM4Q8WVI0 70 aa-0.96□□□□□ -2.56
TUBE1-205ENST00000603651 R4GMQ9 66 aa-0.96□□□□□ -2.56
TUBE1-205ENST00000603651 DOCK1Q14185 1865 aa-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 OVOS2A0A0J9YW53 1432 aa-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 OVOS2Q6IE36 1432 aa-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 CTXND1A0A1B0GTU2 59 aa-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 DBIP07108 87 aaKnown RBP-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 PIPP12273 146 aaPredicted RBP-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 HIST1H1AQ02539 215 aaPredicted RBP-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 DEFB123Q8N688 67 aa-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 SPRR2FQ96RM1 72 aa-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 AMELXQ99217 191 aa-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 AIF1LQ9BQI0 150 aa-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 MRPL40Q9NQ50 206 aaKnown RBP-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 SPANXCQ9NY87 97 aa-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 SBF2Q86WG5 1849 aa-0.97□□□□□ -2.56
TUBE1-205ENST00000603651 USP9XQ93008 2570 aaPredicted RBP-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 LAMA1P25391 3075 aa-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 DNAJC13O75165 2243 aa-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 SIX6O95475 246 aa-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 TSPAN19P0C672 248 aa-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 RRAS2P62070 204 aaPredicted RBP-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 ALX1Q15699 326 aa-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 Q6JHZ5 121 aa-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 SPTSSAQ969W0 71 aa-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 KIF21AQ7Z4S6 1674 aa-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 DISP2A7MBM2 1401 aa-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 PRG4Q92954 1404 aaPredicted RBP-0.98□□□□□ -2.57
TUBE1-205ENST00000603651 PATJQ8NI35 1801 aa-0.99□□□□□ -2.57
TUBE1-205ENST00000603651 IFT140Q96RY7 1462 aa-0.99□□□□□ -2.57
TUBE1-205ENST00000603651 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.99□□□□□ -2.57
TUBE1-205ENST00000603651 SPAARA0A1B0GVQ0 90 aa-0.99□□□□□ -2.57
TUBE1-205ENST00000603651 HCG22E2RYF7 251 aa-0.99□□□□□ -2.57
TUBE1-205ENST00000603651 NDUFB6O95139 128 aa-0.99□□□□□ -2.57
TUBE1-205ENST00000603651 PSMG3Q9BT73 122 aaPredicted RBP-0.99□□□□□ -2.57
TUBE1-205ENST00000603651 SEC11CQ9BY50 192 aa-0.99□□□□□ -2.57
TUBE1-205ENST00000603651 AKAP13Q12802 2813 aa-0.99□□□□□ -2.57
TUBE1-205ENST00000603651 LYSTQ99698 3801 aa-0.99□□□□□ -2.57
TUBE1-205ENST00000603651 DSPP15924 2871 aaKnown RBP-1□□□□□ -2.57
TUBE1-205ENST00000603651 HTTP42858 3142 aa-1□□□□□ -2.57
TUBE1-205ENST00000603651 GNG14A0A1W2PPG7 69 aa-1□□□□□ -2.57
TUBE1-205ENST00000603651 SPINK4O60575 86 aa-1□□□□□ -2.57
TUBE1-205ENST00000603651 SNCGO76070 127 aa-1□□□□□ -2.57
TUBE1-205ENST00000603651 TMEM170BQ5T4T1 132 aa-1□□□□□ -2.57
TUBE1-205ENST00000603651 CTAGE3PQ8IX95 158 aa-1□□□□□ -2.57
TUBE1-205ENST00000603651 FXYD6Q9H0Q3 95 aa-1□□□□□ -2.57
TUBE1-205ENST00000603651 SPANXA1Q9NS26 97 aa-1□□□□□ -2.57
TUBE1-205ENST00000603651 ARAP2Q8WZ64 1704 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 DOCK2Q92608 1830 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 SPEF2Q9C093 1822 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 NBASA2RRP1 2371 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 NCR2O95944 276 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 C10orf128Q5T292 105 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 SMIM3Q9BZL3 60 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 LENEPQ9Y5L5 61 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 GAPVD1Q14C86 1478 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 ZNF518AQ6AHZ1 1483 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 DNAH11Q96DT5 4516 aa-1.01□□□□□ -2.57
TUBE1-205ENST00000603651 CMYA5Q8N3K9 4069 aa-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 ABCA13Q86UQ4 5058 aa-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 NEFHP12036 1026 aa-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 S100A5P33763 92 aa-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 COX17Q14061 63 aa-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 Q6AWC8 147 aa-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 ANKRD11Q6UB99 2663 aaPredicted RBP-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 SCIMPQ6UWF3 145 aa-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 DEFB105AQ8NG35 78 aa-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 TEX15Q9BXT5 2789 aa-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 V9GYH0 126 aa-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 APOBP04114 4563 aaKnown RBP-1.02□□□□□ -2.57
TUBE1-205ENST00000603651 ACACAQ13085 2346 aa-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 GOLGA4Q13439 2230 aaKnown RBP-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 RIMS1Q86UR5 1692 aaKnown RBP-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 DYNC1H1Q14204 4646 aaKnown RBP-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 TULP4Q9NRJ4 1543 aa-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 TRAV13-2A0A0B4J235 113 aa-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 DEFB135Q30KP9 77 aa-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 DEFB112Q30KQ8 113 aa-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 RIF1Q5UIP0 2472 aaKnown RBP-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 LAMA3Q16787 3333 aa-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 WDR87Q6ZQQ6 2873 aa-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 ZFHX3Q15911 3703 aa-1.03□□□□□ -2.57
TUBE1-205ENST00000603651 NSD3Q9BZ95 1437 aa-1.04□□□□□ -2.58
TUBE1-205ENST00000603651 UQCR11O14957 56 aa-1.04□□□□□ -2.58
TUBE1-205ENST00000603651 CKS1BP61024 79 aa-1.04□□□□□ -2.58
TUBE1-205ENST00000603651 TAC4Q86UU9 113 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms