RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 UBR4Q5T4S7 5183 aa12.61□□□□□ -0.39
PPFIA3-210ENST00000602800 I3L3M4 83 aa12.61□□□□□ -0.39
PPFIA3-210ENST00000602800 OXTP01178 125 aa12.61□□□□□ -0.39
PPFIA3-210ENST00000602800 RPL32P62910 135 aaKnown RBP12.61□□□□□ -0.39
PPFIA3-210ENST00000602800 CHAC1Q9BUX1 264 aa12.61□□□□□ -0.39
PPFIA3-210ENST00000602800 POLR2KP53803 58 aaKnown RBP12.6□□□□□ -0.39
PPFIA3-210ENST00000602800 COTL1Q14019 142 aa12.6□□□□□ -0.39
PPFIA3-210ENST00000602800 ALKBH7Q9BT30 221 aaPredicted RBP12.6□□□□□ -0.39
PPFIA3-210ENST00000602800 KIR2DL4Q99706 377 aa12.59□□□□□ -0.39
PPFIA3-210ENST00000602800 TRBV27A0A0K0K1C4 114 aa12.58□□□□□ -0.4
PPFIA3-210ENST00000602800 PRSS47A8MTI9 375 aa12.58□□□□□ -0.4
PPFIA3-210ENST00000602800 TCAPO15273 167 aa12.58□□□□□ -0.4
PPFIA3-210ENST00000602800 SMIM2Q9BVW6 85 aa12.58□□□□□ -0.4
PPFIA3-210ENST00000602800 IGKV2D-24A0A075B6R9 120 aa12.57□□□□□ -0.4
PPFIA3-210ENST00000602800 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
PPFIA3-210ENST00000602800 LOC389332A0A1B0GUA5 103 aa12.57□□□□□ -0.4
PPFIA3-210ENST00000602800 TRGC2P03986 189 aa12.57□□□□□ -0.4
PPFIA3-210ENST00000602800 FCER1GP30273 86 aa12.57□□□□□ -0.4
PPFIA3-210ENST00000602800 CIRBP-AS1Q8TBR5 109 aa12.57□□□□□ -0.4
PPFIA3-210ENST00000602800 PLA2G2DQ9UNK4 145 aa12.57□□□□□ -0.4
PPFIA3-210ENST00000602800 TRBV25-1A0A075B6N4 114 aa12.56□□□□□ -0.4
PPFIA3-210ENST00000602800 IGHV1-24A0A0C4DH33 117 aa12.56□□□□□ -0.4
PPFIA3-210ENST00000602800 KRTAP10-4P60372 401 aaPredicted RBP12.56□□□□□ -0.4
PPFIA3-210ENST00000602800 NXT2Q9NPJ8 142 aaKnown RBP12.56□□□□□ -0.4
PPFIA3-210ENST00000602800 AMTP48728 403 aa12.55□□□□□ -0.4
PPFIA3-210ENST00000602800 Q8N8P6 123 aa12.55□□□□□ -0.4
PPFIA3-210ENST00000602800 PRSS3P2Q8NHM4 247 aa12.55□□□□□ -0.4
PPFIA3-210ENST00000602800 PKIAP61925 76 aa12.54□□□□□ -0.4
PPFIA3-210ENST00000602800 IQCJQ1A5X6 159 aa12.54□□□□□ -0.4
PPFIA3-210ENST00000602800 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
PPFIA3-210ENST00000602800 KLK12Q9UKR0 248 aa12.54□□□□□ -0.4
PPFIA3-210ENST00000602800 FAT3Q8TDW7 4589 aa12.54□□□□□ -0.4
PPFIA3-210ENST00000602800 TSHBP01222 138 aa12.53□□□□□ -0.4
PPFIA3-210ENST00000602800 NIT1Q86X76 327 aa12.53□□□□□ -0.4
PPFIA3-210ENST00000602800 CHCHD5Q9BSY4 110 aa12.53□□□□□ -0.4
PPFIA3-210ENST00000602800 TMEM243Q9BU79 118 aa12.53□□□□□ -0.4
PPFIA3-210ENST00000602800 K7EMI3 77 aa12.52□□□□□ -0.41
PPFIA3-210ENST00000602800 UBE2WQ96B02 151 aa12.52□□□□□ -0.41
PPFIA3-210ENST00000602800 A0A087WX48 190 aa12.51□□□□□ -0.41
PPFIA3-210ENST00000602800 UBE2L6O14933 153 aa12.51□□□□□ -0.41
PPFIA3-210ENST00000602800 TMEM262E9PQX1 116 aa12.5□□□□□ -0.41
PPFIA3-210ENST00000602800 IFI27P40305 119 aaPredicted RBP12.5□□□□□ -0.41
PPFIA3-210ENST00000602800 RAB5BP61020 215 aa12.5□□□□□ -0.41
PPFIA3-210ENST00000602800 C14orf177Q52M58 125 aa12.5□□□□□ -0.41
PPFIA3-210ENST00000602800 FA2HQ7L5A8 372 aa12.5□□□□□ -0.41
PPFIA3-210ENST00000602800 C18orf32Q8TCD1 76 aa12.5□□□□□ -0.41
PPFIA3-210ENST00000602800 TMEM18Q96B42 140 aa12.5□□□□□ -0.41
PPFIA3-210ENST00000602800 CHCHD7Q9BUK0 85 aa12.5□□□□□ -0.41
PPFIA3-210ENST00000602800 H7C423 109 aa12.49□□□□□ -0.41
PPFIA3-210ENST00000602800 SMAGPQ0VAQ4 97 aa12.49□□□□□ -0.41
PPFIA3-210ENST00000602800 ORMDL2Q53FV1 153 aa12.49□□□□□ -0.41
PPFIA3-210ENST00000602800 ESDP10768 282 aa12.48□□□□□ -0.41
PPFIA3-210ENST00000602800 G0S2P27469 103 aa12.48□□□□□ -0.41
PPFIA3-210ENST00000602800 RPL37AP61513 92 aaKnown RBP12.48□□□□□ -0.41
PPFIA3-210ENST00000602800 Q0VG73 95 aa12.48□□□□□ -0.41
PPFIA3-210ENST00000602800 C1orf196B1AJZ1 125 aa12.47□□□□□ -0.41
PPFIA3-210ENST00000602800 GAGE6Q13070 117 aa12.47□□□□□ -0.41
PPFIA3-210ENST00000602800 LINC00614P0C842 121 aa12.46□□□□□ -0.41
PPFIA3-210ENST00000602800 AMMECR1LQ6DCA0 310 aa12.46□□□□□ -0.41
PPFIA3-210ENST00000602800 BAGE3Q86Y29 109 aa12.46□□□□□ -0.41
PPFIA3-210ENST00000602800 C1orf43Q9BWL3 253 aa12.46□□□□□ -0.41
PPFIA3-210ENST00000602800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.45□□□□□ -0.42
PPFIA3-210ENST00000602800 IGKV2-29A2NJV5 120 aaPredicted RBP12.45□□□□□ -0.42
PPFIA3-210ENST00000602800 C20orf203Q8NBC4 194 aa12.45□□□□□ -0.42
PPFIA3-210ENST00000602800 LINC01546A6NGU7 62 aa12.44□□□□□ -0.42
PPFIA3-210ENST00000602800 RNASEKQ6P5S7 137 aaKnown RBP12.44□□□□□ -0.42
PPFIA3-210ENST00000602800 AP5S1Q9NUS5 200 aa12.44□□□□□ -0.42
PPFIA3-210ENST00000602800 CRPP02741 224 aa12.43□□□□□ -0.42
PPFIA3-210ENST00000602800 CHCHD1Q96BP2 118 aaKnown RBP12.43□□□□□ -0.42
PPFIA3-210ENST00000602800 TMEM101Q96IK0 257 aa12.43□□□□□ -0.42
PPFIA3-210ENST00000602800 A0A1B0GUV1 79 aa12.42□□□□□ -0.42
PPFIA3-210ENST00000602800 FGF6P10767 208 aa12.42□□□□□ -0.42
PPFIA3-210ENST00000602800 ZNF25P17030 456 aaPredicted RBP12.42□□□□□ -0.42
PPFIA3-210ENST00000602800 CYSLTR1Q9Y271 337 aa12.42□□□□□ -0.42
PPFIA3-210ENST00000602800 LINC01549A6NIU2 74 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST1H2BKO60814 126 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST1H2BJP06899 126 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST1H2BOP23527 126 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST1H2BBP33778 126 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST1H2BDP58876 126 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST1H2BCP62807 126 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 RBX1P62877 108 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST2H2BEQ16778 126 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 MPV17L2Q567V2 206 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 DGAT2L7PQ6IED9 249 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST1H2BHQ93079 126 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST1H2BNQ99877 126 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 HIST1H2BMQ99879 126 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 PKHD1L1Q86WI1 4243 aa12.41□□□□□ -0.42
PPFIA3-210ENST00000602800 ENHOQ6UWT2 76 aa12.4□□□□□ -0.42
PPFIA3-210ENST00000602800 MRPL52Q86TS9 123 aaKnown RBP12.4□□□□□ -0.42
PPFIA3-210ENST00000602800 OR5A1Q8NGJ0 315 aa12.4□□□□□ -0.42
PPFIA3-210ENST00000602800 TIMM21Q9BVV7 248 aa12.4□□□□□ -0.42
PPFIA3-210ENST00000602800 USP17L23D6RBM5 183 aa12.39□□□□□ -0.43
PPFIA3-210ENST00000602800 HNRNPA3P51991 378 aaKnown RBP12.39□□□□□ -0.43
PPFIA3-210ENST00000602800 C2orf66Q6UXQ4 117 aa12.39□□□□□ -0.43
PPFIA3-210ENST00000602800 URB1-AS1Q96HZ7 61 aa12.39□□□□□ -0.43
PPFIA3-210ENST00000602800 SPANXA1Q9NS26 97 aa12.39□□□□□ -0.43
PPFIA3-210ENST00000602800 HSBP1O75506 76 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms