RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	FAT3	Q8TDW7	4589 aa		7.96	□□□□□ -1.13
STRN4-223	ENST00000602223	C7orf77	A4D0Y5	90 aa		7.96	□□□□□ -1.14
STRN4-223	ENST00000602223	PPP1R2P9	O14990	202 aa		7.96	□□□□□ -1.14
STRN4-223	ENST00000602223	CAMP	P49913	170 aa		7.96	□□□□□ -1.14
STRN4-223	ENST00000602223	KRTAP10-4	P60372	401 aa	Predicted RBP	7.96	□□□□□ -1.14
STRN4-223	ENST00000602223	CFAP161	Q6P656	301 aa		7.96	□□□□□ -1.14
STRN4-223	ENST00000602223	MRPL52	Q86TS9	123 aa	Known RBP	7.96	□□□□□ -1.14
STRN4-223	ENST00000602223	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.96	□□□□□ -1.14
STRN4-223	ENST00000602223	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7.95	□□□□□ -1.14
STRN4-223	ENST00000602223	LINC00959	A0A1B0GUT2	108 aa		7.95	□□□□□ -1.14
STRN4-223	ENST00000602223	LINC00862	A6NCI5	91 aa		7.95	□□□□□ -1.14
STRN4-223	ENST00000602223	PANO1	I0J062	215 aa		7.95	□□□□□ -1.14
STRN4-223	ENST00000602223	FOXI1	Q12951	378 aa		7.95	□□□□□ -1.14
STRN4-223	ENST00000602223	CDC42SE2	Q9NRR3	84 aa		7.95	□□□□□ -1.14
STRN4-223	ENST00000602223	TRBV24-1	A0A075B6N3	115 aa		7.94	□□□□□ -1.14
STRN4-223	ENST00000602223	IGHV3-64	A0A075B6Q5	118 aa		7.94	□□□□□ -1.14
STRN4-223	ENST00000602223		A0A1B0GXF2	115 aa		7.94	□□□□□ -1.14
STRN4-223	ENST00000602223	FCER1G	P30273	86 aa		7.94	□□□□□ -1.14
STRN4-223	ENST00000602223	CIRBP	Q14011	172 aa	Known RBP	7.94	□□□□□ -1.14
STRN4-223	ENST00000602223	MRPL54	Q6P161	138 aa	Known RBP	7.94	□□□□□ -1.14
STRN4-223	ENST00000602223	KIR2DL4	Q99706	377 aa		7.94	□□□□□ -1.14
STRN4-223	ENST00000602223	LRP1	Q07954	4544 aa	Known RBP	7.94	□□□□□ -1.14
STRN4-223	ENST00000602223	GVQW2	A0A096LPI5	108 aa	Predicted RBP	7.93	□□□□□ -1.14
STRN4-223	ENST00000602223	CCL25	O15444	150 aa		7.93	□□□□□ -1.14
STRN4-223	ENST00000602223	S100A8	P05109	93 aa		7.93	□□□□□ -1.14
STRN4-223	ENST00000602223	CKS2	P33552	79 aa		7.93	□□□□□ -1.14
STRN4-223	ENST00000602223	XCL1	P47992	114 aa		7.93	□□□□□ -1.14
STRN4-223	ENST00000602223	RPL32	P62910	135 aa	Known RBP	7.93	□□□□□ -1.14
STRN4-223	ENST00000602223	HBB	P68871	147 aa		7.93	□□□□□ -1.14
STRN4-223	ENST00000602223	HIGD2B	Q4VC39	106 aa		7.93	□□□□□ -1.14
STRN4-223	ENST00000602223	ZNF664	Q8N3J9	261 aa		7.93	□□□□□ -1.14
STRN4-223	ENST00000602223	C20orf78	Q9BR46	151 aa		7.93	□□□□□ -1.14
STRN4-223	ENST00000602223	CSDC2	Q9Y534	153 aa	Known RBP	7.93	□□□□□ -1.14
STRN4-223	ENST00000602223		F8W036	122 aa		7.92	□□□□□ -1.14
STRN4-223	ENST00000602223	SMAGP	Q0VAQ4	97 aa		7.92	□□□□□ -1.14
STRN4-223	ENST00000602223	SS18	Q15532	418 aa		7.92	□□□□□ -1.14
STRN4-223	ENST00000602223	UBE2D4	Q9Y2X8	147 aa		7.92	□□□□□ -1.14
STRN4-223	ENST00000602223		D6R8Y8	96 aa		7.91	□□□□□ -1.14
STRN4-223	ENST00000602223	TNFRSF6B	O95407	300 aa		7.91	□□□□□ -1.14
STRN4-223	ENST00000602223	RAB14	P61106	215 aa		7.91	□□□□□ -1.14
STRN4-223	ENST00000602223	PNRC1	Q12796	327 aa	Predicted RBP	7.91	□□□□□ -1.14
STRN4-223	ENST00000602223	CD164L2	Q6UWJ8	174 aa		7.91	□□□□□ -1.14
STRN4-223	ENST00000602223	ATP5L2	Q7Z4Y8	100 aa		7.91	□□□□□ -1.14
STRN4-223	ENST00000602223	IGHV1-58	A0A0C4DH39	117 aa		7.9	□□□□□ -1.14
STRN4-223	ENST00000602223	TCAP	O15273	167 aa		7.9	□□□□□ -1.14
STRN4-223	ENST00000602223	CHTF8	P0CG12	524 aa		7.9	□□□□□ -1.14
STRN4-223	ENST00000602223	RPL37A	P61513	92 aa	Known RBP	7.9	□□□□□ -1.14
STRN4-223	ENST00000602223	SPACA4	Q8TDM5	124 aa		7.9	□□□□□ -1.14
STRN4-223	ENST00000602223	TMEM18	Q96B42	140 aa		7.9	□□□□□ -1.14
STRN4-223	ENST00000602223	TIMM21	Q9BVV7	248 aa		7.9	□□□□□ -1.14
STRN4-223	ENST00000602223	SMIM2	Q9BVW6	85 aa		7.9	□□□□□ -1.14
STRN4-223	ENST00000602223	KRTAP29-1	A8MX34	341 aa	Predicted RBP	7.89	□□□□□ -1.15
STRN4-223	ENST00000602223	PHOX2A	O14813	284 aa		7.89	□□□□□ -1.15
STRN4-223	ENST00000602223	NPY	P01303	97 aa		7.89	□□□□□ -1.15
STRN4-223	ENST00000602223	PPBP	P02775	128 aa		7.89	□□□□□ -1.15
STRN4-223	ENST00000602223		A0A087WYN8	130 aa		7.88	□□□□□ -1.15
STRN4-223	ENST00000602223	COX6A2	Q02221	97 aa		7.88	□□□□□ -1.15
STRN4-223	ENST00000602223	RNASE13	Q5GAN3	156 aa	Known RBP	7.88	□□□□□ -1.15
STRN4-223	ENST00000602223	CLLU1	Q5K131	121 aa		7.88	□□□□□ -1.15
STRN4-223	ENST00000602223		Q6ZUT4	128 aa		7.88	□□□□□ -1.15
STRN4-223	ENST00000602223	ANAPC16	Q96DE5	110 aa		7.88	□□□□□ -1.15
STRN4-223	ENST00000602223	C1orf196	B1AJZ1	125 aa		7.87	□□□□□ -1.15
STRN4-223	ENST00000602223	MT-ND4L	P03901	98 aa		7.87	□□□□□ -1.15
STRN4-223	ENST00000602223	ORMDL3	Q8N138	153 aa		7.87	□□□□□ -1.15
STRN4-223	ENST00000602223	PRSS3P2	Q8NHM4	247 aa		7.87	□□□□□ -1.15
STRN4-223	ENST00000602223		J3QL48	77 aa		7.86	□□□□□ -1.15
STRN4-223	ENST00000602223	RPL39	P62891	51 aa	Known RBP	7.86	□□□□□ -1.15
STRN4-223	ENST00000602223	TMEM136	Q6ZRR5	245 aa		7.86	□□□□□ -1.15
STRN4-223	ENST00000602223	FAM104A	Q969W3	186 aa		7.86	□□□□□ -1.15
STRN4-223	ENST00000602223	LINC00526	Q96FQ7	95 aa		7.86	□□□□□ -1.15
STRN4-223	ENST00000602223	DPH3	Q96FX2	82 aa		7.86	□□□□□ -1.15
STRN4-223	ENST00000602223	PRELID3A	Q96N28	172 aa		7.86	□□□□□ -1.15
STRN4-223	ENST00000602223	PLAC8	Q9NZF1	115 aa		7.86	□□□□□ -1.15
STRN4-223	ENST00000602223	TRAV13-1	A0A0B4J241	112 aa		7.85	□□□□□ -1.15
STRN4-223	ENST00000602223	HNRNPA3	P51991	378 aa	Known RBP	7.85	□□□□□ -1.15
STRN4-223	ENST00000602223	CARD19	Q96LW7	228 aa		7.85	□□□□□ -1.15
STRN4-223	ENST00000602223	SPANXA1	Q9NS26	97 aa		7.85	□□□□□ -1.15
STRN4-223	ENST00000602223		A0A096LNI7	61 aa		7.84	□□□□□ -1.15
STRN4-223	ENST00000602223	IGKV2-24	A0A0C4DH68	120 aa		7.84	□□□□□ -1.15
STRN4-223	ENST00000602223	PRSS47	A8MTI9	375 aa		7.84	□□□□□ -1.15
STRN4-223	ENST00000602223	ZNF561-AS1	K7EIQ3	104 aa		7.84	□□□□□ -1.15
STRN4-223	ENST00000602223	COX7A2L	O14548	114 aa		7.84	□□□□□ -1.15
STRN4-223	ENST00000602223	MAL	P21145	153 aa		7.84	□□□□□ -1.15
STRN4-223	ENST00000602223	MRPS36	P82909	103 aa	Known RBP	7.84	□□□□□ -1.15
STRN4-223	ENST00000602223	PKIG	Q9Y2B9	76 aa		7.84	□□□□□ -1.15
STRN4-223	ENST00000602223	LAMTOR2	Q9Y2Q5	125 aa		7.84	□□□□□ -1.15
STRN4-223	ENST00000602223	IFITM2	Q01629	132 aa		7.83	□□□□□ -1.16
STRN4-223	ENST00000602223	SYCN	Q0VAF6	134 aa		7.83	□□□□□ -1.16
STRN4-223	ENST00000602223	MAJIN	Q3KP22	176 aa		7.83	□□□□□ -1.16
STRN4-223	ENST00000602223	IGLV4-69	A0A075B6H9	119 aa		7.82	□□□□□ -1.16
STRN4-223	ENST00000602223	OXT	P01178	125 aa		7.82	□□□□□ -1.16
STRN4-223	ENST00000602223	ADCYAP1	P18509	176 aa		7.82	□□□□□ -1.16
STRN4-223	ENST00000602223	RAB5A	P20339	215 aa		7.82	□□□□□ -1.16
STRN4-223	ENST00000602223	UQCC3	Q6UW78	93 aa		7.82	□□□□□ -1.16
STRN4-223	ENST00000602223	C5orf38	Q86SI9	138 aa		7.82	□□□□□ -1.16
STRN4-223	ENST00000602223	OPRPN	Q99935	248 aa	Predicted RBP	7.82	□□□□□ -1.16
STRN4-223	ENST00000602223	APOM	O95445	188 aa		7.81	□□□□□ -1.16
STRN4-223	ENST00000602223		Q6ZRU5	148 aa		7.81	□□□□□ -1.16
STRN4-223	ENST00000602223	STPG4	Q8N801	248 aa		7.81	□□□□□ -1.16
STRN4-223	ENST00000602223	C2orf48	Q96LS8	159 aa		7.81	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 414.5 ms