RNA–Protein interactions for RNA: ENST00000601032.5

LTBP4-229, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 1 (best)

Gene LTBP4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-229ENST00000601032 LINC00336Q6ZUF6 198 aa12.53□□□□□ -0.4
LTBP4-229ENST00000601032 CYSTM1Q9H1C7 97 aa12.52□□□□□ -0.4
LTBP4-229ENST00000601032 LEPROTO15243 131 aa12.52□□□□□ -0.41
LTBP4-229ENST00000601032 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.41
LTBP4-229ENST00000601032 EDN2P20800 178 aa12.52□□□□□ -0.41
LTBP4-229ENST00000601032 TSPEAR-AS2P59090 65 aa12.52□□□□□ -0.41
LTBP4-229ENST00000601032 CFHR3Q02985 330 aa12.52□□□□□ -0.41
LTBP4-229ENST00000601032 F8P00451 2351 aa12.51□□□□□ -0.41
LTBP4-229ENST00000601032 MXRA5Q9NR99 2828 aa12.51□□□□□ -0.41
LTBP4-229ENST00000601032 IGLV1-40P01703 118 aa12.5□□□□□ -0.41
LTBP4-229ENST00000601032 SUMO2P61956 95 aaKnown RBP12.5□□□□□ -0.41
LTBP4-229ENST00000601032 C14orf178Q8N769 122 aaPredicted RBP12.5□□□□□ -0.41
LTBP4-229ENST00000601032 TMEM141Q96I45 108 aa12.5□□□□□ -0.41
LTBP4-229ENST00000601032 C20orf173Q96LM9 149 aa12.5□□□□□ -0.41
LTBP4-229ENST00000601032 GPHB5Q86YW7 130 aa12.5□□□□□ -0.41
LTBP4-229ENST00000601032 SMR3AQ99954 134 aa12.5□□□□□ -0.41
LTBP4-229ENST00000601032 RNF152Q8N8N0 203 aa12.49□□□□□ -0.41
LTBP4-229ENST00000601032 TIMM21Q9BVV7 248 aa12.49□□□□□ -0.41
LTBP4-229ENST00000601032 CUBNO60494 3623 aa12.49□□□□□ -0.41
LTBP4-229ENST00000601032 TRAV12-2A0A075B6T6 113 aa12.49□□□□□ -0.41
LTBP4-229ENST00000601032 M0R381 172 aa12.49□□□□□ -0.41
LTBP4-229ENST00000601032 PPP1R17O96001 155 aa12.49□□□□□ -0.41
LTBP4-229ENST00000601032 DEFB1P60022 68 aa12.49□□□□□ -0.41
LTBP4-229ENST00000601032 NPC2P61916 151 aa12.49□□□□□ -0.41
LTBP4-229ENST00000601032 KRTAP1-1Q07627 177 aa12.49□□□□□ -0.41
LTBP4-229ENST00000601032 SERP1Q9Y6X1 66 aa12.48□□□□□ -0.41
LTBP4-229ENST00000601032 MTORP42345 2549 aa12.48□□□□□ -0.41
LTBP4-229ENST00000601032 FSHBP01225 129 aa12.47□□□□□ -0.41
LTBP4-229ENST00000601032 TEP1Q99973 2627 aaKnown RBP12.47□□□□□ -0.41
LTBP4-229ENST00000601032 H3BUA1 57 aa12.47□□□□□ -0.41
LTBP4-229ENST00000601032 USMG5Q96IX5 58 aa12.47□□□□□ -0.41
LTBP4-229ENST00000601032 NDUFA4O00483 81 aa12.46□□□□□ -0.41
LTBP4-229ENST00000601032 C11orf21Q9P2W6 132 aa12.46□□□□□ -0.41
LTBP4-229ENST00000601032 INAFM2P0DMQ5 153 aa12.45□□□□□ -0.42
LTBP4-229ENST00000601032 SYNJ2BPP57105 145 aa12.45□□□□□ -0.42
LTBP4-229ENST00000601032 TRAV26-2A0A0B4J265 109 aa12.45□□□□□ -0.42
LTBP4-229ENST00000601032 RHOHQ15669 191 aa12.45□□□□□ -0.42
LTBP4-229ENST00000601032 C1orf195Q5TG92 126 aa12.45□□□□□ -0.42
LTBP4-229ENST00000601032 TIMM17AQ99595 171 aa12.45□□□□□ -0.42
LTBP4-229ENST00000601032 PKIGQ9Y2B9 76 aa12.45□□□□□ -0.42
LTBP4-229ENST00000601032 SOCS3O14543 225 aa12.44□□□□□ -0.42
LTBP4-229ENST00000601032 C16orf92Q96LL3 132 aa12.44□□□□□ -0.42
LTBP4-229ENST00000601032 IGKV3-7A0A075B6H7 116 aa12.43□□□□□ -0.42
LTBP4-229ENST00000601032 IGIPA6NJ69 53 aa12.43□□□□□ -0.42
LTBP4-229ENST00000601032 ZNF876PQ49A33 203 aa12.43□□□□□ -0.42
LTBP4-229ENST00000601032 PRR9Q5T870 116 aa12.43□□□□□ -0.42
LTBP4-229ENST00000601032 Q6JHZ5 121 aa12.43□□□□□ -0.42
LTBP4-229ENST00000601032 NSD1Q96L73 2696 aaPredicted RBP12.43□□□□□ -0.42
LTBP4-229ENST00000601032 FAM222AQ5U5X8 452 aa12.42□□□□□ -0.42
LTBP4-229ENST00000601032 CLEC2BQ92478 149 aa12.42□□□□□ -0.42
LTBP4-229ENST00000601032 ANK3Q12955 4377 aaKnown RBP12.42□□□□□ -0.42
LTBP4-229ENST00000601032 HIVEP2P31629 2446 aa12.42□□□□□ -0.42
LTBP4-229ENST00000601032 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
LTBP4-229ENST00000601032 IGHV7-4-1A0A0J9YVY3 117 aa12.42□□□□□ -0.42
LTBP4-229ENST00000601032 I3L3M4 83 aa12.42□□□□□ -0.42
LTBP4-229ENST00000601032 TRAV8-3A0A0A6YYJ7 113 aa12.41□□□□□ -0.42
LTBP4-229ENST00000601032 TSHBP01222 138 aa12.4□□□□□ -0.42
LTBP4-229ENST00000601032 MRPS36P82909 103 aaKnown RBP12.4□□□□□ -0.42
LTBP4-229ENST00000601032 Q6YL49 198 aa12.4□□□□□ -0.42
LTBP4-229ENST00000601032 C9orf47Q6ZRZ4 202 aa12.4□□□□□ -0.42
LTBP4-229ENST00000601032 MRPL53Q96EL3 112 aaKnown RBP12.4□□□□□ -0.42
LTBP4-229ENST00000601032 RHPN1-AS1Q9BWJ2 59 aa12.4□□□□□ -0.42
LTBP4-229ENST00000601032 LY6G6DO95868 133 aa12.4□□□□□ -0.42
LTBP4-229ENST00000601032 SPANXN1Q5VSR9 72 aa12.4□□□□□ -0.42
LTBP4-229ENST00000601032 ZNF702PQ9H963 129 aa12.4□□□□□ -0.42
LTBP4-229ENST00000601032 SMIM26A0A096LP01 95 aa12.39□□□□□ -0.43
LTBP4-229ENST00000601032 F6UB75 175 aa12.39□□□□□ -0.43
LTBP4-229ENST00000601032 SPRY2O43597 315 aa12.39□□□□□ -0.43
LTBP4-229ENST00000601032 COPS9Q8WXC6 57 aa12.39□□□□□ -0.43
LTBP4-229ENST00000601032 A0A0J9YXY3 114 aa12.38□□□□□ -0.43
LTBP4-229ENST00000601032 FAM236DA0A1B0GTK5 79 aa12.38□□□□□ -0.43
LTBP4-229ENST00000601032 FAM236CP0DP71 79 aa12.38□□□□□ -0.43
LTBP4-229ENST00000601032 C9orf139Q6ZV77 190 aa12.38□□□□□ -0.43
LTBP4-229ENST00000601032 ZNF580Q9UK33 172 aa12.38□□□□□ -0.43
LTBP4-229ENST00000601032 NIPBLQ6KC79 2804 aaeCLIP12.38□□□□□ -0.43
LTBP4-229ENST00000601032 RPL11P62913 178 aaKnown RBP12.38□□□□□ -0.43
LTBP4-229ENST00000601032 TP53TG1Q9Y2A0 90 aa12.37□□□□□ -0.43
LTBP4-229ENST00000601032 FN1P02751 2386 aaKnown RBP12.37□□□□□ -0.43
LTBP4-229ENST00000601032 HIST2H2BDQ6DRA6 164 aa12.37□□□□□ -0.43
LTBP4-229ENST00000601032 USP17L23D6RBM5 183 aa12.36□□□□□ -0.43
LTBP4-229ENST00000601032 LITAFQ99732 161 aa12.36□□□□□ -0.43
LTBP4-229ENST00000601032 C16orf95Q9H693 158 aa12.36□□□□□ -0.43
LTBP4-229ENST00000601032 DAZ1Q9NQZ3 744 aaKnown RBP12.36□□□□□ -0.43
LTBP4-229ENST00000601032 TMEM61Q8N0U2 210 aa12.35□□□□□ -0.43
LTBP4-229ENST00000601032 TIRAPP58753 221 aa12.35□□□□□ -0.43
LTBP4-229ENST00000601032 NSUN5P1Q3KNT7 163 aa12.35□□□□□ -0.43
LTBP4-229ENST00000601032 C18orf65Q6ZTR6 163 aa12.35□□□□□ -0.43
LTBP4-229ENST00000601032 ZFAND2AQ8N6M9 145 aa12.35□□□□□ -0.43
LTBP4-229ENST00000601032 DAZ2Q13117 558 aaKnown RBP12.34□□□□□ -0.43
LTBP4-229ENST00000601032 FHL2Q14192 279 aa12.34□□□□□ -0.43
LTBP4-229ENST00000601032 DAZ4Q86SG3 579 aaKnown RBP12.34□□□□□ -0.43
LTBP4-229ENST00000601032 DAZ3Q9NR90 486 aaKnown RBP12.34□□□□□ -0.43
LTBP4-229ENST00000601032 COX7A2LO14548 114 aa12.33□□□□□ -0.43
LTBP4-229ENST00000601032 MIAQ16674 131 aa12.33□□□□□ -0.43
LTBP4-229ENST00000601032 C6orf226Q5I0X4 101 aa12.33□□□□□ -0.44
LTBP4-229ENST00000601032 TMEM243Q9BU79 118 aa12.33□□□□□ -0.44
LTBP4-229ENST00000601032 NF1P21359 2839 aa12.33□□□□□ -0.44
LTBP4-229ENST00000601032 IGHV4OR15-8A0A075B7B6 117 aa12.32□□□□□ -0.44
LTBP4-229ENST00000601032 A0A087WW49 117 aa12.32□□□□□ -0.44
LTBP4-229ENST00000601032 K7EMT4 169 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms