RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 UBE2L6O14933 153 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 TSHBP01222 138 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 APCSP02743 223 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 PRSS1P07477 247 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 REG3AQ06141 175 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 KRTAP26-1Q6PEX3 210 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 C20orf203Q8NBC4 194 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 CLRN3Q8NCR9 226 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 C20orf78Q9BR46 151 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 TMEM242Q9NWH2 141 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 D6R8Y8 96 aa7.51□□□□□ -1.21
SOX2-OT-233ENST00000600778 H7C423 109 aa7.51□□□□□ -1.21
SOX2-OT-233ENST00000600778 TNFRSF6BO95407 300 aa7.51□□□□□ -1.21
SOX2-OT-233ENST00000600778 PPBPP02775 128 aa7.51□□□□□ -1.21
SOX2-OT-233ENST00000600778 TMEM136Q6ZRR5 245 aa7.51□□□□□ -1.21
SOX2-OT-233ENST00000600778 CIRBP-AS1Q8TBR5 109 aa7.51□□□□□ -1.21
SOX2-OT-233ENST00000600778 PKHD1L1Q86WI1 4243 aa7.51□□□□□ -1.21
SOX2-OT-233ENST00000600778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
SOX2-OT-233ENST00000600778 TRAV9-1A0A075B6T8 112 aa7.5□□□□□ -1.21
SOX2-OT-233ENST00000600778 IGKV2-29A2NJV5 120 aaPredicted RBP7.5□□□□□ -1.21
SOX2-OT-233ENST00000600778 ESDP10768 282 aa7.5□□□□□ -1.21
SOX2-OT-233ENST00000600778 RPL32P62910 135 aaKnown RBP7.5□□□□□ -1.21
SOX2-OT-233ENST00000600778 RHEBQ15382 184 aa7.5□□□□□ -1.21
SOX2-OT-233ENST00000600778 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
SOX2-OT-233ENST00000600778 RPS10P5Q9NQ39 176 aa7.5□□□□□ -1.21
SOX2-OT-233ENST00000600778 TRAV8-4A0A0B4J246 113 aa7.49□□□□□ -1.21
SOX2-OT-233ENST00000600778 PHOX2AO14813 284 aa7.49□□□□□ -1.21
SOX2-OT-233ENST00000600778 NPYP01303 97 aa7.49□□□□□ -1.21
SOX2-OT-233ENST00000600778 APOC3P02656 99 aa7.49□□□□□ -1.21
SOX2-OT-233ENST00000600778 S100PP25815 95 aa7.49□□□□□ -1.21
SOX2-OT-233ENST00000600778 FCER1GP30273 86 aa7.49□□□□□ -1.21
SOX2-OT-233ENST00000600778 AMMECR1LQ6DCA0 310 aa7.49□□□□□ -1.21
SOX2-OT-233ENST00000600778 ORMDL3Q8N138 153 aa7.49□□□□□ -1.21
SOX2-OT-233ENST00000600778 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
SOX2-OT-233ENST00000600778 FGF6P10767 208 aa7.48□□□□□ -1.21
SOX2-OT-233ENST00000600778 NDUFA5Q16718 116 aa7.48□□□□□ -1.21
SOX2-OT-233ENST00000600778 RNASEKQ6P5S7 137 aaKnown RBP7.48□□□□□ -1.21
SOX2-OT-233ENST00000600778 C9orf163Q8N9P6 203 aa7.48□□□□□ -1.21
SOX2-OT-233ENST00000600778 PRELID3AQ96N28 172 aa7.48□□□□□ -1.21
SOX2-OT-233ENST00000600778 KIR2DL4Q99706 377 aa7.48□□□□□ -1.21
SOX2-OT-233ENST00000600778 FLG2Q5D862 2391 aaPredicted RBP7.48□□□□□ -1.21
SOX2-OT-233ENST00000600778 SVBPQ8N300 66 aa7.47□□□□□ -1.21
SOX2-OT-233ENST00000600778 SMIM2Q9BVW6 85 aa7.47□□□□□ -1.21
SOX2-OT-233ENST00000600778 IGKV3OR2-268A0A0C4DH90 116 aa7.46□□□□□ -1.22
SOX2-OT-233ENST00000600778 hDV102S1A0JD36 115 aa7.46□□□□□ -1.22
SOX2-OT-233ENST00000600778 PRSS47A8MTI9 375 aa7.46□□□□□ -1.22
SOX2-OT-233ENST00000600778 SNAPINO95295 136 aa7.46□□□□□ -1.22
SOX2-OT-233ENST00000600778 ZNF25P17030 456 aaPredicted RBP7.46□□□□□ -1.22
SOX2-OT-233ENST00000600778 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.22
SOX2-OT-233ENST00000600778 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
SOX2-OT-233ENST00000600778 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.22
SOX2-OT-233ENST00000600778 TCAPO15273 167 aa7.45□□□□□ -1.22
SOX2-OT-233ENST00000600778 MRPL52Q86TS9 123 aaKnown RBP7.45□□□□□ -1.22
SOX2-OT-233ENST00000600778 OR5A1Q8NGJ0 315 aa7.45□□□□□ -1.22
SOX2-OT-233ENST00000600778 TMEM101Q96IK0 257 aa7.45□□□□□ -1.22
SOX2-OT-233ENST00000600778 GNB1LQ9BYB4 327 aa7.45□□□□□ -1.22
SOX2-OT-233ENST00000600778 GAGE12HA6NDE8 117 aa7.44□□□□□ -1.22
SOX2-OT-233ENST00000600778 PANO1I0J062 215 aa7.44□□□□□ -1.22
SOX2-OT-233ENST00000600778 KRTAP10-4P60372 401 aaPredicted RBP7.44□□□□□ -1.22
SOX2-OT-233ENST00000600778 KIAA1644Q3SXP7 199 aa7.44□□□□□ -1.22
SOX2-OT-233ENST00000600778 COX19Q49B96 90 aa7.44□□□□□ -1.22
SOX2-OT-233ENST00000600778 SDIM1Q6ZPB5 146 aa7.44□□□□□ -1.22
SOX2-OT-233ENST00000600778 SLC7A5P1Q8MH63 180 aa7.44□□□□□ -1.22
SOX2-OT-233ENST00000600778 CDC42SE2Q9NRR3 84 aa7.44□□□□□ -1.22
SOX2-OT-233ENST00000600778 AP5S1Q9NUS5 200 aa7.44□□□□□ -1.22
SOX2-OT-233ENST00000600778 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.44□□□□□ -1.22
SOX2-OT-233ENST00000600778 LOC389332A0A1B0GUA5 103 aa7.43□□□□□ -1.22
SOX2-OT-233ENST00000600778 KRTAP29-1A8MX34 341 aaPredicted RBP7.43□□□□□ -1.22
SOX2-OT-233ENST00000600778 SLPIP03973 132 aa7.43□□□□□ -1.22
SOX2-OT-233ENST00000600778 RAB5AP20339 215 aa7.43□□□□□ -1.22
SOX2-OT-233ENST00000600778 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
SOX2-OT-233ENST00000600778 Q8N8P6 123 aa7.43□□□□□ -1.22
SOX2-OT-233ENST00000600778 TMEM18Q96B42 140 aa7.43□□□□□ -1.22
SOX2-OT-233ENST00000600778 MAP1LC3AQ9H492 121 aa7.43□□□□□ -1.22
SOX2-OT-233ENST00000600778 UBE2D4Q9Y2X8 147 aa7.43□□□□□ -1.22
SOX2-OT-233ENST00000600778 IGHV3-64A0A075B6Q5 118 aa7.42□□□□□ -1.22
SOX2-OT-233ENST00000600778 TGIF2-C20orf24A0A0A6YYL0 155 aa7.42□□□□□ -1.22
SOX2-OT-233ENST00000600778 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
SOX2-OT-233ENST00000600778 RPL37AP61513 92 aaKnown RBP7.42□□□□□ -1.22
SOX2-OT-233ENST00000600778 SMAGPQ0VAQ4 97 aa7.42□□□□□ -1.22
SOX2-OT-233ENST00000600778 ZNF664Q8N3J9 261 aa7.42□□□□□ -1.22
SOX2-OT-233ENST00000600778 TIMM21Q9BVV7 248 aa7.42□□□□□ -1.22
SOX2-OT-233ENST00000600778 CSDC2Q9Y534 153 aaKnown RBP7.42□□□□□ -1.22
SOX2-OT-233ENST00000600778 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.41□□□□□ -1.22
SOX2-OT-233ENST00000600778 CFAP161Q6P656 301 aa7.41□□□□□ -1.22
SOX2-OT-233ENST00000600778 C15orf56Q8N910 161 aa7.41□□□□□ -1.22
SOX2-OT-233ENST00000600778 CHCHD10Q8WYQ3 142 aaPredicted RBP7.41□□□□□ -1.22
SOX2-OT-233ENST00000600778 DPH3Q96FX2 82 aa7.41□□□□□ -1.22
SOX2-OT-233ENST00000600778 LINC00959A0A1B0GUT2 108 aa7.4□□□□□ -1.22
SOX2-OT-233ENST00000600778 MT-ND6P03923 174 aa7.4□□□□□ -1.22
SOX2-OT-233ENST00000600778 RPL39P62891 51 aaKnown RBP7.4□□□□□ -1.22
SOX2-OT-233ENST00000600778 FABP9Q0Z7S8 132 aa7.4□□□□□ -1.22
SOX2-OT-233ENST00000600778 HIGD2BQ4VC39 106 aa7.4□□□□□ -1.22
SOX2-OT-233ENST00000600778 MRPL18Q9H0U6 180 aaKnown RBP7.4□□□□□ -1.22
SOX2-OT-233ENST00000600778 CHTF8P0CG12 524 aa7.39□□□□□ -1.23
SOX2-OT-233ENST00000600778 IFI27P40305 119 aaPredicted RBP7.39□□□□□ -1.23
SOX2-OT-233ENST00000600778 FAM104AQ969W3 186 aa7.39□□□□□ -1.23
SOX2-OT-233ENST00000600778 ALKBH7Q9BT30 221 aaPredicted RBP7.39□□□□□ -1.23
SOX2-OT-233ENST00000600778 NXT2Q9NPJ8 142 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms