RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 OR10AG1Q8NH19 301 aa7.53□□□□□ -1.2
HIF3A-217ENST00000600236 CHCHD1Q96BP2 118 aaKnown RBP7.53□□□□□ -1.2
HIF3A-217ENST00000600236 LAMTOR2Q9Y2Q5 125 aa7.53□□□□□ -1.2
HIF3A-217ENST00000600236 MRPL51Q4U2R6 128 aaKnown RBP7.52□□□□□ -1.21
HIF3A-217ENST00000600236 AMN1Q8IY45 258 aa7.52□□□□□ -1.21
HIF3A-217ENST00000600236 NEXN-AS1Q8NBZ9 246 aa7.52□□□□□ -1.21
HIF3A-217ENST00000600236 RNF185Q96GF1 192 aa7.52□□□□□ -1.21
HIF3A-217ENST00000600236 URB1-AS1Q96HZ7 61 aa7.52□□□□□ -1.21
HIF3A-217ENST00000600236 AP1S3Q96PC3 154 aa7.52□□□□□ -1.21
HIF3A-217ENST00000600236 CHCHD5Q9BSY4 110 aa7.52□□□□□ -1.21
HIF3A-217ENST00000600236 FAT1Q14517 4588 aa7.51□□□□□ -1.21
HIF3A-217ENST00000600236 ANGP03950 147 aaKnown RBP7.51□□□□□ -1.21
HIF3A-217ENST00000600236 PMCHP20382 165 aa7.51□□□□□ -1.21
HIF3A-217ENST00000600236 ORMDL3Q8N138 153 aa7.51□□□□□ -1.21
HIF3A-217ENST00000600236 DEFB104AQ8WTQ1 72 aa7.51□□□□□ -1.21
HIF3A-217ENST00000600236 HSBP1O75506 76 aa7.5□□□□□ -1.21
HIF3A-217ENST00000600236 RAB4AP20338 218 aa7.5□□□□□ -1.21
HIF3A-217ENST00000600236 AMTP48728 403 aa7.5□□□□□ -1.21
HIF3A-217ENST00000600236 S100A12P80511 92 aa7.5□□□□□ -1.21
HIF3A-217ENST00000600236 MIAQ16674 131 aa7.5□□□□□ -1.21
HIF3A-217ENST00000600236 SCXQ7RTU7 201 aa7.5□□□□□ -1.21
HIF3A-217ENST00000600236 SMIM15Q7Z3B0 74 aa7.5□□□□□ -1.21
HIF3A-217ENST00000600236 DNAJC30Q96LL9 226 aa7.5□□□□□ -1.21
HIF3A-217ENST00000600236 PRELID3AQ96N28 172 aa7.5□□□□□ -1.21
HIF3A-217ENST00000600236 NIT2Q9NQR4 276 aa7.5□□□□□ -1.21
HIF3A-217ENST00000600236 MUC21A0A0G2JKD1 596 aa7.49□□□□□ -1.21
HIF3A-217ENST00000600236 MUC21A0A140T8X8 626 aa7.49□□□□□ -1.21
HIF3A-217ENST00000600236 D6R8Y8 96 aa7.49□□□□□ -1.21
HIF3A-217ENST00000600236 H7C1H1 209 aa7.49□□□□□ -1.21
HIF3A-217ENST00000600236 SSTP61278 116 aa7.49□□□□□ -1.21
HIF3A-217ENST00000600236 LINC01620Q4KN68 170 aa7.49□□□□□ -1.21
HIF3A-217ENST00000600236 MPV17L2Q567V2 206 aa7.49□□□□□ -1.21
HIF3A-217ENST00000600236 RNASEKQ6P5S7 137 aaKnown RBP7.49□□□□□ -1.21
HIF3A-217ENST00000600236 TRBV25-1A0A075B6N4 114 aa7.48□□□□□ -1.21
HIF3A-217ENST00000600236 LINC01546A6NGU7 62 aa7.48□□□□□ -1.21
HIF3A-217ENST00000600236 PRSS47A8MTI9 375 aa7.48□□□□□ -1.21
HIF3A-217ENST00000600236 LINC00614P0C842 121 aa7.48□□□□□ -1.21
HIF3A-217ENST00000600236 ENHOQ6UWT2 76 aa7.48□□□□□ -1.21
HIF3A-217ENST00000600236 MRAP2Q96G30 205 aa7.48□□□□□ -1.21
HIF3A-217ENST00000600236 CHAC1Q9BUX1 264 aa7.48□□□□□ -1.21
HIF3A-217ENST00000600236 NPYP01303 97 aa7.47□□□□□ -1.21
HIF3A-217ENST00000600236 MGPP08493 103 aa7.47□□□□□ -1.21
HIF3A-217ENST00000600236 CKS2P33552 79 aa7.47□□□□□ -1.21
HIF3A-217ENST00000600236 AP5S1Q9NUS5 200 aa7.47□□□□□ -1.21
HIF3A-217ENST00000600236 IGHV1-24A0A0C4DH33 117 aa7.46□□□□□ -1.22
HIF3A-217ENST00000600236 GAGE6Q13070 117 aa7.46□□□□□ -1.22
HIF3A-217ENST00000600236 FA2HQ7L5A8 372 aa7.46□□□□□ -1.22
HIF3A-217ENST00000600236 FAM19A2Q8N3H0 131 aa7.46□□□□□ -1.22
HIF3A-217ENST00000600236 CIRBP-AS1Q8TBR5 109 aa7.46□□□□□ -1.22
HIF3A-217ENST00000600236 DPH3P1Q9H4G8 78 aa7.46□□□□□ -1.22
HIF3A-217ENST00000600236 KRTAP29-1A8MX34 341 aaPredicted RBP7.45□□□□□ -1.22
HIF3A-217ENST00000600236 USP17L23D6RBM5 183 aa7.45□□□□□ -1.22
HIF3A-217ENST00000600236 TNFRSF6BO95407 300 aa7.45□□□□□ -1.22
HIF3A-217ENST00000600236 RBX1P62877 108 aa7.45□□□□□ -1.22
HIF3A-217ENST00000600236 TEX43Q6ZNM6 134 aa7.45□□□□□ -1.22
HIF3A-217ENST00000600236 NRACQ8N912 160 aa7.45□□□□□ -1.22
HIF3A-217ENST00000600236 PRSS3P2Q8NHM4 247 aa7.45□□□□□ -1.22
HIF3A-217ENST00000600236 MAP1LC3AQ9H492 121 aa7.45□□□□□ -1.22
HIF3A-217ENST00000600236 NXT2Q9NPJ8 142 aaKnown RBP7.45□□□□□ -1.22
HIF3A-217ENST00000600236 KIF25-AS1Q9Y6Z4 181 aa7.45□□□□□ -1.22
HIF3A-217ENST00000600236 SMKR1H3BMG3 65 aa7.44□□□□□ -1.22
HIF3A-217ENST00000600236 NCR2O95944 276 aa7.44□□□□□ -1.22
HIF3A-217ENST00000600236 C3orf79P0CE67 100 aa7.44□□□□□ -1.22
HIF3A-217ENST00000600236 DGAT2L7PQ6IED9 249 aa7.44□□□□□ -1.22
HIF3A-217ENST00000600236 CLPSL2Q6UWE3 100 aa7.44□□□□□ -1.22
HIF3A-217ENST00000600236 NTM-AS1Q6ZSK4 140 aa7.44□□□□□ -1.22
HIF3A-217ENST00000600236 LINC00269Q8N2A0 174 aa7.44□□□□□ -1.22
HIF3A-217ENST00000600236 PRR34Q9NV39 138 aa7.44□□□□□ -1.22
HIF3A-217ENST00000600236 M0QY20 66 aa7.43□□□□□ -1.22
HIF3A-217ENST00000600236 PPP1R17O96001 155 aa7.43□□□□□ -1.22
HIF3A-217ENST00000600236 IFI27P40305 119 aaPredicted RBP7.43□□□□□ -1.22
HIF3A-217ENST00000600236 RPL32P62910 135 aaKnown RBP7.43□□□□□ -1.22
HIF3A-217ENST00000600236 REG3AQ06141 175 aa7.43□□□□□ -1.22
HIF3A-217ENST00000600236 SUMO4Q6EEV6 95 aa7.43□□□□□ -1.22
HIF3A-217ENST00000600236 C20orf78Q9BR46 151 aa7.43□□□□□ -1.22
HIF3A-217ENST00000600236 HSPB8Q9UJY1 196 aa7.43□□□□□ -1.22
HIF3A-217ENST00000600236 DMBT1Q9UGM3 2413 aaPredicted RBP7.42□□□□□ -1.22
HIF3A-217ENST00000600236 A0A096LNJ9 63 aa7.42□□□□□ -1.22
HIF3A-217ENST00000600236 TRAV8-4A0A0B4J246 113 aa7.42□□□□□ -1.22
HIF3A-217ENST00000600236 UBE2L6O14933 153 aa7.42□□□□□ -1.22
HIF3A-217ENST00000600236 GAS8-AS1O95177 125 aa7.42□□□□□ -1.22
HIF3A-217ENST00000600236 LEPROTL1O95214 131 aa7.42□□□□□ -1.22
HIF3A-217ENST00000600236 SCGB1D1O95968 90 aa7.42□□□□□ -1.22
HIF3A-217ENST00000600236 PRSS1P07477 247 aa7.42□□□□□ -1.22
HIF3A-217ENST00000600236 KRTDAPP60985 99 aa7.42□□□□□ -1.22
HIF3A-217ENST00000600236 Q8N8P6 123 aa7.42□□□□□ -1.22
HIF3A-217ENST00000600236 TMEM243Q9BU79 118 aa7.42□□□□□ -1.22
HIF3A-217ENST00000600236 K7EMI3 77 aa7.41□□□□□ -1.22
HIF3A-217ENST00000600236 HBDP02042 147 aa7.41□□□□□ -1.22
HIF3A-217ENST00000600236 C9orf163Q8N9P6 203 aa7.41□□□□□ -1.22
HIF3A-217ENST00000600236 DNAH8Q96JB1 4490 aa7.4□□□□□ -1.22
HIF3A-217ENST00000600236 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
HIF3A-217ENST00000600236 A0A1B0GUV1 79 aa7.4□□□□□ -1.22
HIF3A-217ENST00000600236 OXTP01178 125 aa7.4□□□□□ -1.22
HIF3A-217ENST00000600236 RPL37AP61513 92 aaKnown RBP7.4□□□□□ -1.22
HIF3A-217ENST00000600236 COTL1Q14019 142 aa7.4□□□□□ -1.22
HIF3A-217ENST00000600236 PMCHL1Q16048 86 aa7.4□□□□□ -1.22
HIF3A-217ENST00000600236 PET117Q6UWS5 81 aa7.4□□□□□ -1.22
HIF3A-217ENST00000600236 SMIM2Q9BVW6 85 aa7.4□□□□□ -1.22
HIF3A-217ENST00000600236 FLG2Q5D862 2391 aaPredicted RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms