RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 TREM1Q9NP99 234 aa2.84□□□□□ -1.95
LINC00343-208ENST00000599264 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.95
LINC00343-208ENST00000599264 TRAV6A0A075B6T7 132 aa2.83□□□□□ -1.96
LINC00343-208ENST00000599264 A0A1B0GVX0 72 aa2.83□□□□□ -1.96
LINC00343-208ENST00000599264 DISC1C4P0D8 188 aa2.83□□□□□ -1.96
LINC00343-208ENST00000599264 SSSCA1O60232 199 aa2.83□□□□□ -1.96
LINC00343-208ENST00000599264 GCSAMLQ5JQS6 135 aa2.83□□□□□ -1.96
LINC00343-208ENST00000599264 MITD1Q8WV92 249 aa2.83□□□□□ -1.96
LINC00343-208ENST00000599264 FXYD5Q96DB9 178 aa2.83□□□□□ -1.96
LINC00343-208ENST00000599264 CARD19Q96LW7 228 aa2.83□□□□□ -1.96
LINC00343-208ENST00000599264 TIMM17AQ99595 171 aa2.83□□□□□ -1.96
LINC00343-208ENST00000599264 BCL7BQ9BQE9 202 aa2.83□□□□□ -1.96
LINC00343-208ENST00000599264 SLIRPQ9GZT3 109 aaKnown RBP2.83□□□□□ -1.96
LINC00343-208ENST00000599264 TRBV25-1A0A075B6N4 114 aa2.82□□□□□ -1.96
LINC00343-208ENST00000599264 HPGDSO60760 199 aa2.82□□□□□ -1.96
LINC00343-208ENST00000599264 AQP4P55087 323 aa2.82□□□□□ -1.96
LINC00343-208ENST00000599264 RANP62826 216 aaKnown RBP2.82□□□□□ -1.96
LINC00343-208ENST00000599264 SMUG1Q53HV7 270 aa2.82□□□□□ -1.96
LINC00343-208ENST00000599264 TMEM97Q5BJF2 176 aa2.82□□□□□ -1.96
LINC00343-208ENST00000599264 Q5W150 140 aa2.82□□□□□ -1.96
LINC00343-208ENST00000599264 MIR17HGQ75NE6 70 aa2.82□□□□□ -1.96
LINC00343-208ENST00000599264 LINC00526Q96FQ7 95 aa2.82□□□□□ -1.96
LINC00343-208ENST00000599264 PRRT1Q99946 306 aa2.82□□□□□ -1.96
LINC00343-208ENST00000599264 NAA50Q9GZZ1 169 aaKnown RBP2.82□□□□□ -1.96
LINC00343-208ENST00000599264 PHLDA3Q9Y5J5 127 aa2.82□□□□□ -1.96
LINC00343-208ENST00000599264 LOC107984640A0A0U1RRK4 108 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 M0R2T5 61 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 AKAIN1P0CW23 69 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 S100A4P26447 101 aaKnown RBP2.81□□□□□ -1.96
LINC00343-208ENST00000599264 GABARAPL2P60520 117 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 IQCJQ1A5X6 159 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 KRTAP6-3Q3LI67 103 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 GOLT1AQ6ZVE7 132 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 CBLN2Q8IUK8 224 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 CLVS1Q8IUQ0 354 aaPredicted RBP2.81□□□□□ -1.96
LINC00343-208ENST00000599264 LINC00337Q8N6G1 96 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 SFRP2Q96HF1 295 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 SCGB3A2Q96PL1 93 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 DERL1Q9BUN8 251 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 IL36BQ9NZH7 164 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 OR5AC2Q9NZP5 309 aa2.81□□□□□ -1.96
LINC00343-208ENST00000599264 TRBV6-1A0A0K0K1D8 114 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 FAM25AB3EWG3 89 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 FAM25CB3EWG5 89 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 FAM25GB3EWG6 89 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 H3BVH4 76 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 GCGP01275 180 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 BCL2P10415 239 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 FGF6P10767 208 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 RAB4AP20338 218 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 SULT1A2P50226 295 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 TAS2R30P59541 319 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 SSBP1Q04837 148 aaKnown RBP2.8□□□□□ -1.96
LINC00343-208ENST00000599264 SYCNQ0VAF6 134 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 TMEM128Q5BJH2 165 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.8□□□□□ -1.96
LINC00343-208ENST00000599264 LINC00304Q8N9R0 145 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 TSKUQ8WUA8 353 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 HYLS1Q96M11 299 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 AQP10Q96PS8 301 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 CAMK2N2Q96S95 79 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 NMES1Q9C002 83 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 SCP2D1Q9UJQ7 156 aa2.8□□□□□ -1.96
LINC00343-208ENST00000599264 IGHV1-24A0A0C4DH33 117 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 A6NDN8 102 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 FAM25EA8MYX2 175 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 HSBP1O75506 76 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 SFT2D2O95562 160 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 IGKV4-1P06312 121 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 RAB4BP61018 213 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 LSM3P62310 102 aaKnown RBP2.79□□□□□ -1.96
LINC00343-208ENST00000599264 KRTAP13-2Q52LG2 175 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 EIF5AL1Q6IS14 154 aaKnown RBP2.79□□□□□ -1.96
LINC00343-208ENST00000599264 CMTM2Q8TAZ6 248 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 C15orf40Q8WUR7 153 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 WFDC1Q9HC57 220 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 OTORQ9NRC9 128 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 LYRM2Q9NU23 88 aaPredicted RBP2.79□□□□□ -1.96
LINC00343-208ENST00000599264 UQCC1Q9NVA1 299 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 MCUBQ9NWR8 336 aa2.79□□□□□ -1.96
LINC00343-208ENST00000599264 IGHV1-58A0A0C4DH39 117 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 IGKV3OR2-268A0A0C4DH90 116 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 UBE2L5PA0A1B0GUS4 154 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 TMEM223A0PJW6 202 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 C7orf66A4D0T2 115 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.78□□□□□ -1.96
LINC00343-208ENST00000599264 OR7C2O60412 319 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 ARMS2P0C7Q2 107 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 BCAP31P51572 246 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 GNG5P63218 68 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 UBE2L3P68036 154 aaKnown RBP2.78□□□□□ -1.96
LINC00343-208ENST00000599264 CTAG1AP78358 180 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 MEF2BQ02080 365 aaPredicted RBP2.78□□□□□ -1.96
LINC00343-208ENST00000599264 BAXQ07812 192 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 PPP1R1AQ13522 171 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 FP248Q71RG6 208 aaPredicted RBP2.78□□□□□ -1.96
LINC00343-208ENST00000599264 OR5C1Q8NGR4 320 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 SMIM4Q8WVI0 70 aa2.78□□□□□ -1.96
LINC00343-208ENST00000599264 CNBD2Q96M20 576 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms