RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 CLPSL2Q6UWE3 100 aa13.49□□□□□ -0.25
PNKP-211ENST00000598020 MAPKAPK5-AS1Q8N8E1 139 aa13.49□□□□□ -0.25
PNKP-211ENST00000598020 CDC42SE2Q9NRR3 84 aa13.49□□□□□ -0.25
PNKP-211ENST00000598020 PKD1P98161 4303 aa13.49□□□□□ -0.25
PNKP-211ENST00000598020 HECTD4Q9Y4D8 3996 aa13.48□□□□□ -0.25
PNKP-211ENST00000598020 IFI27P40305 119 aaPredicted RBP13.47□□□□□ -0.25
PNKP-211ENST00000598020 KRTAP26-1Q6PEX3 210 aa13.47□□□□□ -0.25
PNKP-211ENST00000598020 RPL39P62891 51 aaKnown RBP13.46□□□□□ -0.25
PNKP-211ENST00000598020 ORMDL2Q53FV1 153 aa13.46□□□□□ -0.25
PNKP-211ENST00000598020 DGAT2L7PQ6IED9 249 aa13.46□□□□□ -0.25
PNKP-211ENST00000598020 ZNF664Q8N3J9 261 aa13.46□□□□□ -0.25
PNKP-211ENST00000598020 SPANXA1Q9NS26 97 aa13.46□□□□□ -0.25
PNKP-211ENST00000598020 DNAH11Q96DT5 4516 aa13.45□□□□□ -0.26
PNKP-211ENST00000598020 LINC01546A6NGU7 62 aa13.44□□□□□ -0.26
PNKP-211ENST00000598020 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
PNKP-211ENST00000598020 PRSS3P2Q8NHM4 247 aa13.43□□□□□ -0.26
PNKP-211ENST00000598020 PYGO1Q9Y3Y4 419 aa13.43□□□□□ -0.26
PNKP-211ENST00000598020 IGLV10-54A0A075B6I4 117 aa13.42□□□□□ -0.26
PNKP-211ENST00000598020 G0S2P27469 103 aa13.42□□□□□ -0.26
PNKP-211ENST00000598020 KRTAP10-2P60368 255 aa13.42□□□□□ -0.26
PNKP-211ENST00000598020 MRPS36P82909 103 aaKnown RBP13.42□□□□□ -0.26
PNKP-211ENST00000598020 WFDC2Q14508 124 aa13.42□□□□□ -0.26
PNKP-211ENST00000598020 BAALCQ8WXS3 180 aa13.42□□□□□ -0.26
PNKP-211ENST00000598020 FAM104AQ969W3 186 aa13.42□□□□□ -0.26
PNKP-211ENST00000598020 PGPEP1Q9NXJ5 209 aa13.42□□□□□ -0.26
PNKP-211ENST00000598020 Q8N814 137 aa13.41□□□□□ -0.26
PNKP-211ENST00000598020 CYSLTR1Q9Y271 337 aa13.41□□□□□ -0.26
PNKP-211ENST00000598020 IGKV3OR2-268A0A0C4DH90 116 aa13.4□□□□□ -0.26
PNKP-211ENST00000598020 LINC00959A0A1B0GUT2 108 aa13.4□□□□□ -0.26
PNKP-211ENST00000598020 CCL25O15444 150 aa13.4□□□□□ -0.26
PNKP-211ENST00000598020 CDPF1Q6NVV7 123 aa13.4□□□□□ -0.26
PNKP-211ENST00000598020 C2orf66Q6UXQ4 117 aa13.4□□□□□ -0.26
PNKP-211ENST00000598020 COLCA2A8K830 154 aa13.39□□□□□ -0.27
PNKP-211ENST00000598020 Q6ZUT4 128 aa13.39□□□□□ -0.27
PNKP-211ENST00000598020 C18orf32Q8TCD1 76 aa13.39□□□□□ -0.27
PNKP-211ENST00000598020 NTN5Q8WTR8 489 aaPredicted RBP13.39□□□□□ -0.27
PNKP-211ENST00000598020 CHCHD10Q8WYQ3 142 aaPredicted RBP13.39□□□□□ -0.27
PNKP-211ENST00000598020 BIRC6Q9NR09 4857 aa13.38□□□□□ -0.27
PNKP-211ENST00000598020 NPSP0C0P6 89 aa13.38□□□□□ -0.27
PNKP-211ENST00000598020 PKHD1P08F94 4074 aa13.37□□□□□ -0.27
PNKP-211ENST00000598020 LECT2O14960 151 aa13.37□□□□□ -0.27
PNKP-211ENST00000598020 SS18Q15532 418 aa13.37□□□□□ -0.27
PNKP-211ENST00000598020 FA2HQ7L5A8 372 aa13.37□□□□□ -0.27
PNKP-211ENST00000598020 GAGE12HA6NDE8 117 aa13.36□□□□□ -0.27
PNKP-211ENST00000598020 LINC01549A6NIU2 74 aa13.36□□□□□ -0.27
PNKP-211ENST00000598020 C1orf196B1AJZ1 125 aa13.36□□□□□ -0.27
PNKP-211ENST00000598020 C14orf177Q52M58 125 aa13.36□□□□□ -0.27
PNKP-211ENST00000598020 TOMM6Q96B49 74 aa13.36□□□□□ -0.27
PNKP-211ENST00000598020 OPRPNQ99935 248 aaPredicted RBP13.36□□□□□ -0.27
PNKP-211ENST00000598020 IGLV4-3A0A075B6K6 122 aa13.35□□□□□ -0.27
PNKP-211ENST00000598020 IGIPA6NJ69 53 aa13.35□□□□□ -0.27
PNKP-211ENST00000598020 C16orf90A8MZG2 172 aa13.35□□□□□ -0.27
PNKP-211ENST00000598020 USP17L23D6RBM5 183 aa13.35□□□□□ -0.27
PNKP-211ENST00000598020 RNASE13Q5GAN3 156 aaKnown RBP13.35□□□□□ -0.27
PNKP-211ENST00000598020 DYNC1H1Q14204 4646 aaKnown RBP13.35□□□□□ -0.27
PNKP-211ENST00000598020 FOXI1Q12951 378 aa13.34□□□□□ -0.27
PNKP-211ENST00000598020 CD164L2Q6UWJ8 174 aa13.34□□□□□ -0.27
PNKP-211ENST00000598020 URB1-AS1Q96HZ7 61 aa13.34□□□□□ -0.27
PNKP-211ENST00000598020 AP5S1Q9NUS5 200 aa13.34□□□□□ -0.27
PNKP-211ENST00000598020 SCO1O75880 301 aa13.33□□□□□ -0.28
PNKP-211ENST00000598020 LINC00614P0C842 121 aa13.33□□□□□ -0.28
PNKP-211ENST00000598020 TMEM141Q96I45 108 aa13.33□□□□□ -0.28
PNKP-211ENST00000598020 TIMM17AQ99595 171 aa13.33□□□□□ -0.28
PNKP-211ENST00000598020 TRAV13-1A0A0B4J241 112 aa13.32□□□□□ -0.28
PNKP-211ENST00000598020 TRGC2P03986 189 aa13.32□□□□□ -0.28
PNKP-211ENST00000598020 XCL1P47992 114 aa13.32□□□□□ -0.28
PNKP-211ENST00000598020 RAB5BP61020 215 aa13.32□□□□□ -0.28
PNKP-211ENST00000598020 DNAH5Q8TE73 4624 aa13.31□□□□□ -0.28
PNKP-211ENST00000598020 ERASQ7Z444 233 aa13.31□□□□□ -0.28
PNKP-211ENST00000598020 AMELXQ99217 191 aa13.31□□□□□ -0.28
PNKP-211ENST00000598020 IGLV5-52A0A0A0MRZ9 124 aa13.3□□□□□ -0.28
PNKP-211ENST00000598020 S100A1P23297 94 aa13.3□□□□□ -0.28
PNKP-211ENST00000598020 PAPPA-AS1Q5QFB9 102 aa13.3□□□□□ -0.28
PNKP-211ENST00000598020 CFAP161Q6P656 301 aa13.3□□□□□ -0.28
PNKP-211ENST00000598020 IFITM10A6NMD0 228 aa13.29□□□□□ -0.28
PNKP-211ENST00000598020 PRSS1P07477 247 aa13.29□□□□□ -0.28
PNKP-211ENST00000598020 FUSP35637 526 aaKnown RBP eCLIP13.29□□□□□ -0.28
PNKP-211ENST00000598020 Q6ZN92 141 aa13.29□□□□□ -0.28
PNKP-211ENST00000598020 TEX43Q6ZNM6 134 aa13.29□□□□□ -0.28
PNKP-211ENST00000598020 LINC00173Q6ZV60 143 aa13.28□□□□□ -0.28
PNKP-211ENST00000598020 C15orf56Q8N910 161 aa13.28□□□□□ -0.28
PNKP-211ENST00000598020 SCGB3A1Q96QR1 104 aa13.28□□□□□ -0.28
PNKP-211ENST00000598020 VCX2Q9H322 139 aa13.28□□□□□ -0.28
PNKP-211ENST00000598020 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.27□□□□□ -0.29
PNKP-211ENST00000598020 A0A096LNJ9 63 aa13.27□□□□□ -0.29
PNKP-211ENST00000598020 CHCHD1Q96BP2 118 aaKnown RBP13.27□□□□□ -0.29
PNKP-211ENST00000598020 ATP6V1G1O75348 118 aa13.26□□□□□ -0.29
PNKP-211ENST00000598020 GCSHP23434 173 aa13.26□□□□□ -0.29
PNKP-211ENST00000598020 C2orf88Q9BSF0 95 aa13.26□□□□□ -0.29
PNKP-211ENST00000598020 LRP1BQ9NZR2 4599 aa13.26□□□□□ -0.29
PNKP-211ENST00000598020 HBDP02042 147 aa13.25□□□□□ -0.29
PNKP-211ENST00000598020 UBE2D1P51668 147 aa13.25□□□□□ -0.29
PNKP-211ENST00000598020 GVQW2A0A096LPI5 108 aaPredicted RBP13.24□□□□□ -0.29
PNKP-211ENST00000598020 IGHV3OR16-9A0A0B4J2B5 98 aa13.24□□□□□ -0.29
PNKP-211ENST00000598020 IGHV1-58A0A0C4DH39 117 aa13.24□□□□□ -0.29
PNKP-211ENST00000598020 COX7A2LO14548 114 aa13.24□□□□□ -0.29
PNKP-211ENST00000598020 LINC00242Q5T6M2 205 aa13.24□□□□□ -0.29
PNKP-211ENST00000598020 FAM19A3Q7Z5A8 133 aa13.24□□□□□ -0.29
PNKP-211ENST00000598020 hDV102S1A0JD36 115 aa13.23□□□□□ -0.29
PNKP-211ENST00000598020 CNBPP62633 177 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms