RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 WDR73Q6P4I2 378 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 RASL11AQ6T310 242 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST1H2BHQ93079 126 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST1H2BNQ99877 126 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 HIST1H2BMQ99879 126 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 TMEM243Q9BU79 118 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 GNB1LQ9BYB4 327 aa10.88□□□□□ -0.67
PNKP-210ENST00000597965 IGLV10-54A0A075B6I4 117 aa10.87□□□□□ -0.67
PNKP-210ENST00000597965 A0A1B0GXF2 115 aa10.87□□□□□ -0.67
PNKP-210ENST00000597965 XKRY2A2RUG3 117 aa10.87□□□□□ -0.67
PNKP-210ENST00000597965 C5orf52A6NGY3 159 aa10.87□□□□□ -0.67
PNKP-210ENST00000597965 M0QY20 66 aa10.87□□□□□ -0.67
PNKP-210ENST00000597965 MGPP08493 103 aa10.87□□□□□ -0.67
PNKP-210ENST00000597965 CACNG7P62955 275 aa10.87□□□□□ -0.67
PNKP-210ENST00000597965 MRPL54Q6P161 138 aaKnown RBP10.87□□□□□ -0.67
PNKP-210ENST00000597965 TMEM136Q6ZRR5 245 aa10.87□□□□□ -0.67
PNKP-210ENST00000597965 PGLYRP4Q96LB8 373 aa10.87□□□□□ -0.67
PNKP-210ENST00000597965 DPH3P1Q9H4G8 78 aa10.87□□□□□ -0.67
PNKP-210ENST00000597965 UBR4Q5T4S7 5183 aa10.86□□□□□ -0.67
PNKP-210ENST00000597965 UBE2L6O14933 153 aa10.86□□□□□ -0.67
PNKP-210ENST00000597965 SNRPEP62304 92 aaKnown RBP10.86□□□□□ -0.67
PNKP-210ENST00000597965 CFAP161Q6P656 301 aa10.86□□□□□ -0.67
PNKP-210ENST00000597965 ATP5L2Q7Z4Y8 100 aa10.86□□□□□ -0.67
PNKP-210ENST00000597965 FER1L6-AS1Q8NA97 138 aa10.86□□□□□ -0.67
PNKP-210ENST00000597965 C7orf33Q8WU49 177 aa10.86□□□□□ -0.67
PNKP-210ENST00000597965 TPPP3Q9BW30 176 aa10.86□□□□□ -0.67
PNKP-210ENST00000597965 F2Z2F3 143 aa10.85□□□□□ -0.67
PNKP-210ENST00000597965 PANO1I0J062 215 aa10.85□□□□□ -0.67
PNKP-210ENST00000597965 NDUFA6P56556 154 aa10.85□□□□□ -0.67
PNKP-210ENST00000597965 MRPL18Q9H0U6 180 aaKnown RBP10.85□□□□□ -0.67
PNKP-210ENST00000597965 MT-ND6P03923 174 aa10.84□□□□□ -0.67
PNKP-210ENST00000597965 S100A6P06703 90 aa10.84□□□□□ -0.67
PNKP-210ENST00000597965 C20orf203Q8NBC4 194 aa10.84□□□□□ -0.67
PNKP-210ENST00000597965 A0A087WYN8 130 aa10.83□□□□□ -0.68
PNKP-210ENST00000597965 MT1HL1P0DM35 61 aa10.83□□□□□ -0.68
PNKP-210ENST00000597965 SUMO4Q6EEV6 95 aa10.83□□□□□ -0.68
PNKP-210ENST00000597965 SPACA4Q8TDM5 124 aa10.83□□□□□ -0.68
PNKP-210ENST00000597965 NIT2Q9NQR4 276 aa10.83□□□□□ -0.68
PNKP-210ENST00000597965 IGLC6P0CF74 106 aa10.82□□□□□ -0.68
PNKP-210ENST00000597965 HBBP68871 147 aa10.82□□□□□ -0.68
PNKP-210ENST00000597965 COTL1Q14019 142 aa10.82□□□□□ -0.68
PNKP-210ENST00000597965 PKHD1L1Q86WI1 4243 aa10.82□□□□□ -0.68
PNKP-210ENST00000597965 A0A1B0GUT8 65 aa10.81□□□□□ -0.68
PNKP-210ENST00000597965 RIGQ13278 110 aa10.81□□□□□ -0.68
PNKP-210ENST00000597965 COA6Q5JTJ3 125 aaKnown RBP10.81□□□□□ -0.68
PNKP-210ENST00000597965 LYZL1Q6UWQ5 148 aa10.81□□□□□ -0.68
PNKP-210ENST00000597965 GATD1Q8NB37 220 aa10.81□□□□□ -0.68
PNKP-210ENST00000597965 PLAC8Q9NZF1 115 aa10.81□□□□□ -0.68
PNKP-210ENST00000597965 IGLV4-60A0A075B6I1 120 aa10.8□□□□□ -0.68
PNKP-210ENST00000597965 APCSP02743 223 aa10.8□□□□□ -0.68
PNKP-210ENST00000597965 AMTP48728 403 aa10.8□□□□□ -0.68
PNKP-210ENST00000597965 CAMPP49913 170 aa10.8□□□□□ -0.68
PNKP-210ENST00000597965 PKIGQ9Y2B9 76 aa10.8□□□□□ -0.68
PNKP-210ENST00000597965 A0A1B0GW15 77 aa10.79□□□□□ -0.68
PNKP-210ENST00000597965 CTRLP40313 264 aa10.79□□□□□ -0.68
PNKP-210ENST00000597965 KIAA1644Q3SXP7 199 aa10.78□□□□□ -0.68
PNKP-210ENST00000597965 SLPIP03973 132 aa10.77□□□□□ -0.69
PNKP-210ENST00000597965 S100A8P05109 93 aa10.77□□□□□ -0.69
PNKP-210ENST00000597965 CHTF8P0CG12 524 aa10.77□□□□□ -0.69
PNKP-210ENST00000597965 NTF3P20783 257 aa10.77□□□□□ -0.69
PNKP-210ENST00000597965 BORCS7Q96B45 105 aa10.77□□□□□ -0.69
PNKP-210ENST00000597965 CNFNQ9BYD5 112 aa10.77□□□□□ -0.69
PNKP-210ENST00000597965 COX6A2Q02221 97 aa10.76□□□□□ -0.69
PNKP-210ENST00000597965 AMMECR1LQ6DCA0 310 aa10.76□□□□□ -0.69
PNKP-210ENST00000597965 HIST3H2BBQ8N257 126 aa10.76□□□□□ -0.69
PNKP-210ENST00000597965 LINC00474Q9P2X8 69 aa10.76□□□□□ -0.69
PNKP-210ENST00000597965 GAGE12HA6NDE8 117 aa10.75□□□□□ -0.69
PNKP-210ENST00000597965 IFITM10A6NMD0 228 aa10.75□□□□□ -0.69
PNKP-210ENST00000597965 H7C423 109 aa10.75□□□□□ -0.69
PNKP-210ENST00000597965 NCR2O95944 276 aa10.75□□□□□ -0.69
PNKP-210ENST00000597965 MAJINQ3KP22 176 aa10.74□□□□□ -0.69
PNKP-210ENST00000597965 C15orf56Q8N910 161 aa10.74□□□□□ -0.69
PNKP-210ENST00000597965 ALKBH7Q9BT30 221 aaPredicted RBP10.74□□□□□ -0.69
PNKP-210ENST00000597965 TWIST1Q15672 202 aa10.73□□□□□ -0.69
PNKP-210ENST00000597965 SMIM15Q7Z3B0 74 aa10.73□□□□□ -0.69
PNKP-210ENST00000597965 LINC01600Q96MT4 127 aa10.73□□□□□ -0.69
PNKP-210ENST00000597965 GVQW2A0A096LPI5 108 aaPredicted RBP10.72□□□□□ -0.69
PNKP-210ENST00000597965 IGKV3OR2-268A0A0C4DH90 116 aa10.72□□□□□ -0.69
PNKP-210ENST00000597965 CHCHD10Q8WYQ3 142 aaPredicted RBP10.72□□□□□ -0.69
PNKP-210ENST00000597965 IGKV2-24A0A0C4DH68 120 aa10.71□□□□□ -0.69
PNKP-210ENST00000597965 NUPR1O60356 82 aa10.71□□□□□ -0.69
PNKP-210ENST00000597965 ZNF25P17030 456 aaPredicted RBP10.71□□□□□ -0.69
PNKP-210ENST00000597965 LINC00310P59036 64 aa10.71□□□□□ -0.69
PNKP-210ENST00000597965 PRR3P79522 188 aaKnown RBP10.71□□□□□ -0.69
PNKP-210ENST00000597965 FAM104BQ5XKR9 115 aa10.71□□□□□ -0.69
PNKP-210ENST00000597965 STPG4Q8N801 248 aa10.71□□□□□ -0.69
PNKP-210ENST00000597965 ESDP10768 282 aa10.7□□□□□ -0.7
PNKP-210ENST00000597965 AKR1D1P51857 326 aa10.7□□□□□ -0.7
PNKP-210ENST00000597965 HIGD2BQ4VC39 106 aa10.7□□□□□ -0.7
PNKP-210ENST00000597965 PDZD11Q5EBL8 140 aa10.7□□□□□ -0.7
PNKP-210ENST00000597965 RNASEKQ6P5S7 137 aaKnown RBP10.7□□□□□ -0.7
PNKP-210ENST00000597965 REG3GQ6UW15 175 aa10.7□□□□□ -0.7
PNKP-210ENST00000597965 PRSS3P2Q8NHM4 247 aa10.7□□□□□ -0.7
PNKP-210ENST00000597965 C18orf32Q8TCD1 76 aa10.7□□□□□ -0.7
PNKP-210ENST00000597965 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
PNKP-210ENST00000597965 BAGE3Q86Y29 109 aa10.69□□□□□ -0.7
PNKP-210ENST00000597965 TMEM101Q96IK0 257 aa10.69□□□□□ -0.7
PNKP-210ENST00000597965 HIST1H2BLQ99880 126 aa10.69□□□□□ -0.7
PNKP-210ENST00000597965 SERF1AO75920 110 aa10.68□□□□□ -0.7
PNKP-210ENST00000597965 S100A2P29034 98 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms