RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 CFHR3Q02985 330 aa11.31□□□□□ -0.6
IRF3-219ENST00000597636 TEX15Q9BXT5 2789 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 NDUFA1O15239 70 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 IGHV4-38-2P0DP08 117 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 KRTAP10-9P60411 292 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 ACANP16112 2415 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 C3orf56Q8N813 242 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 DUX5Q96PT3 197 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 Q9UF83 564 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 ATP5J2P56134 94 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 RNF152Q8N8N0 203 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 CDKN2A-AS1Q9UH64 79 aa11.3□□□□□ -0.6
IRF3-219ENST00000597636 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.29□□□□□ -0.6
IRF3-219ENST00000597636 IGKV2-29A2NJV5 120 aaPredicted RBP11.29□□□□□ -0.6
IRF3-219ENST00000597636 COX7A2LO14548 114 aa11.29□□□□□ -0.6
IRF3-219ENST00000597636 CIRBPQ14011 172 aaKnown RBP11.29□□□□□ -0.6
IRF3-219ENST00000597636 CREBBPQ92793 2442 aa11.29□□□□□ -0.6
IRF3-219ENST00000597636 LINC00308Q8TCZ7 52 aa11.28□□□□□ -0.6
IRF3-219ENST00000597636 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
IRF3-219ENST00000597636 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
IRF3-219ENST00000597636 HTN1P15515 57 aa11.28□□□□□ -0.6
IRF3-219ENST00000597636 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
IRF3-219ENST00000597636 LINC00643Q86TS7 51 aa11.27□□□□□ -0.6
IRF3-219ENST00000597636 SMCR5Q8TEV8 140 aa11.27□□□□□ -0.6
IRF3-219ENST00000597636 LINC00467Q9BRT7 94 aa11.27□□□□□ -0.6
IRF3-219ENST00000597636 KNCNA6PVL3 124 aa11.27□□□□□ -0.61
IRF3-219ENST00000597636 TIRAPP58753 221 aa11.27□□□□□ -0.61
IRF3-219ENST00000597636 Q6ZSN1 163 aa11.27□□□□□ -0.61
IRF3-219ENST00000597636 IGLV5-45A0A087WSX0 123 aa11.26□□□□□ -0.61
IRF3-219ENST00000597636 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.26□□□□□ -0.61
IRF3-219ENST00000597636 SORL1Q92673 2214 aa11.25□□□□□ -0.61
IRF3-219ENST00000597636 PSMB8P28062 276 aa11.25□□□□□ -0.61
IRF3-219ENST00000597636 TMEM95Q3KNT9 176 aa11.25□□□□□ -0.61
IRF3-219ENST00000597636 IGHV4-30-2A0A087WSY4 118 aa11.25□□□□□ -0.61
IRF3-219ENST00000597636 IGHV4-61A0A0C4DH41 118 aa11.25□□□□□ -0.61
IRF3-219ENST00000597636 Q9H8V8 135 aa11.25□□□□□ -0.61
IRF3-219ENST00000597636 DAZ2Q13117 558 aaKnown RBP11.24□□□□□ -0.61
IRF3-219ENST00000597636 SDIM1Q6ZPB5 146 aa11.24□□□□□ -0.61
IRF3-219ENST00000597636 DAZ4Q86SG3 579 aaKnown RBP11.24□□□□□ -0.61
IRF3-219ENST00000597636 Q8N2B8 174 aa11.24□□□□□ -0.61
IRF3-219ENST00000597636 DAZ3Q9NR90 486 aaKnown RBP11.24□□□□□ -0.61
IRF3-219ENST00000597636 IGLV5-39A0A0G2JS06 123 aa11.23□□□□□ -0.61
IRF3-219ENST00000597636 BEAN1Q3B7T3 259 aa11.23□□□□□ -0.61
IRF3-219ENST00000597636 C3orf22Q8N5N4 141 aa11.23□□□□□ -0.61
IRF3-219ENST00000597636 ZNF625Q96I27 306 aaPredicted RBP11.23□□□□□ -0.61
IRF3-219ENST00000597636 VPREB3Q9UKI3 123 aa11.23□□□□□ -0.61
IRF3-219ENST00000597636 IGHV3-38A0A0C4DH36 116 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 A0A0U1RRA0 63 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 TRACP01848 142 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 COX6A2Q02221 97 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 PRM2P04554 102 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 BAALC-AS2P0C853 105 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 C9orf153Q5TBE3 101 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 SOSTDC1Q6X4U4 206 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 SYNJ2BPP57105 145 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 PIK3CD-AS1Q5SR53 167 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 C10orf99Q6UWK7 81 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 COPS9Q8WXC6 57 aa11.22□□□□□ -0.61
IRF3-219ENST00000597636 MXRA5Q9NR99 2828 aa11.21□□□□□ -0.61
IRF3-219ENST00000597636 UQCRQO14949 82 aa11.21□□□□□ -0.62
IRF3-219ENST00000597636 DGAT2L7PQ6IED9 249 aa11.21□□□□□ -0.62
IRF3-219ENST00000597636 DNAJC30Q96LL9 226 aa11.21□□□□□ -0.62
IRF3-219ENST00000597636 IGHV3OR16-12A0A075B7B8 117 aa11.2□□□□□ -0.62
IRF3-219ENST00000597636 ATP5G1P05496 136 aa11.2□□□□□ -0.62
IRF3-219ENST00000597636 PPDPFQ9H3Y8 114 aa11.2□□□□□ -0.62
IRF3-219ENST00000597636 PEMTQ9UBM1 199 aa11.2□□□□□ -0.62
IRF3-219ENST00000597636 C22orf24Q9Y442 160 aa11.2□□□□□ -0.62
IRF3-219ENST00000597636 ITPR3Q14573 2671 aa11.2□□□□□ -0.62
IRF3-219ENST00000597636 NDUFA7O95182 113 aa11.2□□□□□ -0.62
IRF3-219ENST00000597636 HERVK_113P63121 156 aa11.2□□□□□ -0.62
IRF3-219ENST00000597636 IGHV3-53P01767 116 aa11.19□□□□□ -0.62
IRF3-219ENST00000597636 FLNAP21333 2647 aaKnown RBP11.19□□□□□ -0.62
IRF3-219ENST00000597636 CXCL5P42830 114 aa11.19□□□□□ -0.62
IRF3-219ENST00000597636 LINC00242Q5T6M2 205 aa11.19□□□□□ -0.62
IRF3-219ENST00000597636 C5orf38Q86SI9 138 aa11.19□□□□□ -0.62
IRF3-219ENST00000597636 LINC00526Q96FQ7 95 aa11.19□□□□□ -0.62
IRF3-219ENST00000597636 NACAE9PAV3 2078 aa11.19□□□□□ -0.62
IRF3-219ENST00000597636 SETD2Q9BYW2 2564 aaPredicted RBP11.19□□□□□ -0.62
IRF3-219ENST00000597636 ZNF415Q09FC8 603 aa11.18□□□□□ -0.62
IRF3-219ENST00000597636 FAM222AQ5U5X8 452 aa11.18□□□□□ -0.62
IRF3-219ENST00000597636 MTORP42345 2549 aa11.18□□□□□ -0.62
IRF3-219ENST00000597636 LINC00694P0DN24 101 aa11.18□□□□□ -0.62
IRF3-219ENST00000597636 FAM218AQ96MZ4 157 aa11.18□□□□□ -0.62
IRF3-219ENST00000597636 PIMREGQ9BSJ6 248 aa11.18□□□□□ -0.62
IRF3-219ENST00000597636 CUBNO60494 3623 aa11.17□□□□□ -0.62
IRF3-219ENST00000597636 SMIM1B2RUZ4 78 aa11.17□□□□□ -0.62
IRF3-219ENST00000597636 C10orf105Q8TEF2 133 aa11.17□□□□□ -0.62
IRF3-219ENST00000597636 UNC79Q9P2D8 2635 aa11.17□□□□□ -0.62
IRF3-219ENST00000597636 INAFM2P0DMQ5 153 aa11.16□□□□□ -0.62
IRF3-219ENST00000597636 PRIMA1Q86XR5 153 aa11.16□□□□□ -0.62
IRF3-219ENST00000597636 FLNBO75369 2602 aaKnown RBP11.16□□□□□ -0.62
IRF3-219ENST00000597636 TMEM89A2RUT3 159 aa11.16□□□□□ -0.62
IRF3-219ENST00000597636 DEFB131AP59861 70 aa11.16□□□□□ -0.62
IRF3-219ENST00000597636 RBMY1BA6NDE4 496 aaKnown RBP11.15□□□□□ -0.62
IRF3-219ENST00000597636 RBMY1EA6NEQ0 496 aaKnown RBP11.15□□□□□ -0.62
IRF3-219ENST00000597636 A8MTW9 85 aa11.15□□□□□ -0.62
IRF3-219ENST00000597636 RBMY1DP0C7P1 496 aaKnown RBP11.15□□□□□ -0.62
IRF3-219ENST00000597636 MYO9AB2RTY4 2548 aa11.15□□□□□ -0.62
IRF3-219ENST00000597636 PLA2G2AP14555 144 aa11.15□□□□□ -0.62
IRF3-219ENST00000597636 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms