RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 RNF185Q96GF1 192 aa9.93□□□□□ -0.82
TGFB1-202ENST00000597453 PACRGQ96M98 296 aaPredicted RBP9.93□□□□□ -0.82
TGFB1-202ENST00000597453 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
TGFB1-202ENST00000597453 TRBV6-5A0A0K0K1A5 114 aa9.92□□□□□ -0.82
TGFB1-202ENST00000597453 JOSD1Q15040 202 aaPredicted RBP9.92□□□□□ -0.82
TGFB1-202ENST00000597453 Q8N976 141 aa9.92□□□□□ -0.82
TGFB1-202ENST00000597453 TRAPPC1Q9Y5R8 145 aa9.92□□□□□ -0.82
TGFB1-202ENST00000597453 LRP1Q07954 4544 aaKnown RBP9.92□□□□□ -0.82
TGFB1-202ENST00000597453 TMEM262E9PQX1 116 aa9.91□□□□□ -0.82
TGFB1-202ENST00000597453 MT-ND6P03923 174 aa9.91□□□□□ -0.82
TGFB1-202ENST00000597453 FABP4P15090 132 aa9.91□□□□□ -0.82
TGFB1-202ENST00000597453 COTL1Q14019 142 aa9.91□□□□□ -0.82
TGFB1-202ENST00000597453 MPV17L2Q567V2 206 aa9.91□□□□□ -0.82
TGFB1-202ENST00000597453 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
TGFB1-202ENST00000597453 TMEM18Q96B42 140 aa9.91□□□□□ -0.82
TGFB1-202ENST00000597453 A0A1B0GXF2 115 aa9.9□□□□□ -0.82
TGFB1-202ENST00000597453 CAMPP49913 170 aa9.9□□□□□ -0.82
TGFB1-202ENST00000597453 HBBP68871 147 aa9.9□□□□□ -0.82
TGFB1-202ENST00000597453 TMEM243Q9BU79 118 aa9.9□□□□□ -0.82
TGFB1-202ENST00000597453 FAT3Q8TDW7 4589 aa9.9□□□□□ -0.83
TGFB1-202ENST00000597453 SDHAF1A6NFY7 115 aa9.89□□□□□ -0.83
TGFB1-202ENST00000597453 GAS8-AS1O95177 125 aa9.89□□□□□ -0.83
TGFB1-202ENST00000597453 NCR2O95944 276 aa9.89□□□□□ -0.83
TGFB1-202ENST00000597453 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
TGFB1-202ENST00000597453 ESDP10768 282 aa9.89□□□□□ -0.83
TGFB1-202ENST00000597453 GAGE6Q13070 117 aa9.89□□□□□ -0.83
TGFB1-202ENST00000597453 FAM104BQ5XKR9 115 aa9.89□□□□□ -0.83
TGFB1-202ENST00000597453 MRPL54Q6P161 138 aaKnown RBP9.89□□□□□ -0.83
TGFB1-202ENST00000597453 ENHOQ6UWT2 76 aa9.89□□□□□ -0.83
TGFB1-202ENST00000597453 ATP5L2Q7Z4Y8 100 aa9.89□□□□□ -0.83
TGFB1-202ENST00000597453 GNB1LQ9BYB4 327 aa9.89□□□□□ -0.83
TGFB1-202ENST00000597453 LINC00587B1AMM8 73 aa9.88□□□□□ -0.83
TGFB1-202ENST00000597453 AMTP48728 403 aa9.88□□□□□ -0.83
TGFB1-202ENST00000597453 RBX1P62877 108 aa9.88□□□□□ -0.83
TGFB1-202ENST00000597453 ST20Q9HBF5 79 aa9.88□□□□□ -0.83
TGFB1-202ENST00000597453 PKHD1L1Q86WI1 4243 aa9.87□□□□□ -0.83
TGFB1-202ENST00000597453 I3L3M4 83 aa9.87□□□□□ -0.83
TGFB1-202ENST00000597453 PPP1R17O96001 155 aa9.87□□□□□ -0.83
TGFB1-202ENST00000597453 ANGP03950 147 aaKnown RBP9.87□□□□□ -0.83
TGFB1-202ENST00000597453 Q0VG73 95 aa9.87□□□□□ -0.83
TGFB1-202ENST00000597453 MRPL51Q4U2R6 128 aaKnown RBP9.87□□□□□ -0.83
TGFB1-202ENST00000597453 DEFB104AQ8WTQ1 72 aa9.87□□□□□ -0.83
TGFB1-202ENST00000597453 CHAC1Q9BUX1 264 aa9.87□□□□□ -0.83
TGFB1-202ENST00000597453 C1orf43Q9BWL3 253 aa9.87□□□□□ -0.83
TGFB1-202ENST00000597453 SMKR1H3BMG3 65 aa9.86□□□□□ -0.83
TGFB1-202ENST00000597453 J3QL48 77 aa9.86□□□□□ -0.83
TGFB1-202ENST00000597453 UBE2L6O14933 153 aa9.86□□□□□ -0.83
TGFB1-202ENST00000597453 CRPP02741 224 aa9.86□□□□□ -0.83
TGFB1-202ENST00000597453 APCSP02743 223 aa9.86□□□□□ -0.83
TGFB1-202ENST00000597453 PDZD11Q5EBL8 140 aa9.86□□□□□ -0.83
TGFB1-202ENST00000597453 NRACQ8N912 160 aa9.86□□□□□ -0.83
TGFB1-202ENST00000597453 TRBV27A0A0K0K1C4 114 aa9.85□□□□□ -0.83
TGFB1-202ENST00000597453 A0A1B0GUV1 79 aa9.85□□□□□ -0.83
TGFB1-202ENST00000597453 PMCHP20382 165 aa9.85□□□□□ -0.83
TGFB1-202ENST00000597453 POLR2KP53803 58 aaKnown RBP9.85□□□□□ -0.83
TGFB1-202ENST00000597453 KRTAP10-4P60372 401 aaPredicted RBP9.85□□□□□ -0.83
TGFB1-202ENST00000597453 CIRBP-AS1Q8TBR5 109 aa9.85□□□□□ -0.83
TGFB1-202ENST00000597453 PRR34Q9NV39 138 aa9.85□□□□□ -0.83
TGFB1-202ENST00000597453 TSTD3H0UI37 97 aa9.84□□□□□ -0.83
TGFB1-202ENST00000597453 HLA-DQA1P01909 254 aa9.84□□□□□ -0.83
TGFB1-202ENST00000597453 MRPL18Q9H0U6 180 aaKnown RBP9.84□□□□□ -0.83
TGFB1-202ENST00000597453 USP17L23D6RBM5 183 aa9.83□□□□□ -0.84
TGFB1-202ENST00000597453 H7C423 109 aa9.83□□□□□ -0.84
TGFB1-202ENST00000597453 TSHBP01222 138 aa9.83□□□□□ -0.84
TGFB1-202ENST00000597453 CKS2P33552 79 aa9.83□□□□□ -0.84
TGFB1-202ENST00000597453 SUMO2P61956 95 aaKnown RBP9.83□□□□□ -0.84
TGFB1-202ENST00000597453 MIAQ16674 131 aa9.83□□□□□ -0.84
TGFB1-202ENST00000597453 C20orf203Q8NBC4 194 aa9.83□□□□□ -0.84
TGFB1-202ENST00000597453 IGLV4-60A0A075B6I1 120 aa9.82□□□□□ -0.84
TGFB1-202ENST00000597453 KRTAP29-1A8MX34 341 aaPredicted RBP9.82□□□□□ -0.84
TGFB1-202ENST00000597453 PPBPP02775 128 aa9.82□□□□□ -0.84
TGFB1-202ENST00000597453 C14orf177Q52M58 125 aa9.82□□□□□ -0.84
TGFB1-202ENST00000597453 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
TGFB1-202ENST00000597453 LINC00269Q8N2A0 174 aa9.82□□□□□ -0.84
TGFB1-202ENST00000597453 C20orf78Q9BR46 151 aa9.82□□□□□ -0.84
TGFB1-202ENST00000597453 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.81□□□□□ -0.84
TGFB1-202ENST00000597453 IGKV2-29A2NJV5 120 aaPredicted RBP9.81□□□□□ -0.84
TGFB1-202ENST00000597453 D6R8Y8 96 aa9.81□□□□□ -0.84
TGFB1-202ENST00000597453 VCYO14598 125 aa9.81□□□□□ -0.84
TGFB1-202ENST00000597453 RPL32P62910 135 aaKnown RBP9.81□□□□□ -0.84
TGFB1-202ENST00000597453 REG3AQ06141 175 aa9.81□□□□□ -0.84
TGFB1-202ENST00000597453 KRTAP26-1Q6PEX3 210 aa9.81□□□□□ -0.84
TGFB1-202ENST00000597453 TMEM136Q6ZRR5 245 aa9.81□□□□□ -0.84
TGFB1-202ENST00000597453 HMCN2Q8NDA2 5059 aa9.81□□□□□ -0.84
TGFB1-202ENST00000597453 TNFRSF6BO95407 300 aa9.8□□□□□ -0.84
TGFB1-202ENST00000597453 PRSS1P07477 247 aa9.8□□□□□ -0.84
TGFB1-202ENST00000597453 FGF6P10767 208 aa9.79□□□□□ -0.84
TGFB1-202ENST00000597453 ZNF25P17030 456 aaPredicted RBP9.79□□□□□ -0.84
TGFB1-202ENST00000597453 FCER1GP30273 86 aa9.79□□□□□ -0.84
TGFB1-202ENST00000597453 AMMECR1LQ6DCA0 310 aa9.79□□□□□ -0.84
TGFB1-202ENST00000597453 ORMDL3Q8N138 153 aa9.79□□□□□ -0.84
TGFB1-202ENST00000597453 KIR2DL4Q99706 377 aa9.79□□□□□ -0.84
TGFB1-202ENST00000597453 NPYP01303 97 aa9.78□□□□□ -0.84
TGFB1-202ENST00000597453 DDTP30046 118 aa9.78□□□□□ -0.84
TGFB1-202ENST00000597453 LBHQ53QV2 105 aaPredicted RBP9.78□□□□□ -0.84
TGFB1-202ENST00000597453 RNASEKQ6P5S7 137 aaKnown RBP9.78□□□□□ -0.84
TGFB1-202ENST00000597453 SMIM2Q9BVW6 85 aa9.78□□□□□ -0.84
TGFB1-202ENST00000597453 TRAV8-4A0A0B4J246 113 aa9.77□□□□□ -0.85
TGFB1-202ENST00000597453 TCAPO15273 167 aa9.77□□□□□ -0.85
TGFB1-202ENST00000597453 MRPL52Q86TS9 123 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms