RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 KRTAP26-1Q6PEX3 210 aa10.45□□□□□ -0.74
USHBP1-205ENST00000595993 BAALCQ8WXS3 180 aa10.45□□□□□ -0.74
USHBP1-205ENST00000595993 C20orf78Q9BR46 151 aa10.45□□□□□ -0.74
USHBP1-205ENST00000595993 C1orf43Q9BWL3 253 aa10.45□□□□□ -0.74
USHBP1-205ENST00000595993 COX11Q9Y6N1 276 aa10.45□□□□□ -0.74
USHBP1-205ENST00000595993 H7C423 109 aa10.44□□□□□ -0.74
USHBP1-205ENST00000595993 PPBPP02775 128 aa10.44□□□□□ -0.74
USHBP1-205ENST00000595993 FGF6P10767 208 aa10.44□□□□□ -0.74
USHBP1-205ENST00000595993 RHEBQ15382 184 aa10.44□□□□□ -0.74
USHBP1-205ENST00000595993 TMEM136Q6ZRR5 245 aa10.44□□□□□ -0.74
USHBP1-205ENST00000595993 ORMDL3Q8N138 153 aa10.44□□□□□ -0.74
USHBP1-205ENST00000595993 TRAV9-1A0A075B6T8 112 aa10.43□□□□□ -0.74
USHBP1-205ENST00000595993 RPL32P62910 135 aaKnown RBP10.43□□□□□ -0.74
USHBP1-205ENST00000595993 AMMECR1LQ6DCA0 310 aa10.43□□□□□ -0.74
USHBP1-205ENST00000595993 RNASEKQ6P5S7 137 aaKnown RBP10.43□□□□□ -0.74
USHBP1-205ENST00000595993 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
USHBP1-205ENST00000595993 PRELID3AQ96N28 172 aa10.43□□□□□ -0.74
USHBP1-205ENST00000595993 SMIM2Q9BVW6 85 aa10.43□□□□□ -0.74
USHBP1-205ENST00000595993 RPS10P5Q9NQ39 176 aa10.43□□□□□ -0.74
USHBP1-205ENST00000595993 PHOX2AO14813 284 aa10.42□□□□□ -0.74
USHBP1-205ENST00000595993 APOC3P02656 99 aa10.42□□□□□ -0.74
USHBP1-205ENST00000595993 FCER1GP30273 86 aa10.42□□□□□ -0.74
USHBP1-205ENST00000595993 KIR2DL4Q99706 377 aa10.42□□□□□ -0.74
USHBP1-205ENST00000595993 UBR4Q5T4S7 5183 aa10.41□□□□□ -0.74
USHBP1-205ENST00000595993 IGLV10-54A0A075B6I4 117 aa10.41□□□□□ -0.74
USHBP1-205ENST00000595993 KRTAP10-4P60372 401 aaPredicted RBP10.41□□□□□ -0.74
USHBP1-205ENST00000595993 HLA-DQA1P01909 254 aa10.4□□□□□ -0.74
USHBP1-205ENST00000595993 ZNF25P17030 456 aaPredicted RBP10.4□□□□□ -0.74
USHBP1-205ENST00000595993 S100PP25815 95 aa10.4□□□□□ -0.74
USHBP1-205ENST00000595993 MRPL52Q86TS9 123 aaKnown RBP10.4□□□□□ -0.74
USHBP1-205ENST00000595993 IGKV3OR2-268A0A0C4DH90 116 aa10.39□□□□□ -0.75
USHBP1-205ENST00000595993 TCAPO15273 167 aa10.39□□□□□ -0.75
USHBP1-205ENST00000595993 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
USHBP1-205ENST00000595993 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.38□□□□□ -0.75
USHBP1-205ENST00000595993 TRAV8-4A0A0B4J246 113 aa10.38□□□□□ -0.75
USHBP1-205ENST00000595993 PRSS47A8MTI9 375 aa10.38□□□□□ -0.75
USHBP1-205ENST00000595993 KIAA1644Q3SXP7 199 aa10.38□□□□□ -0.75
USHBP1-205ENST00000595993 OR5A1Q8NGJ0 315 aa10.38□□□□□ -0.75
USHBP1-205ENST00000595993 LAMTOR2Q9Y2Q5 125 aa10.38□□□□□ -0.75
USHBP1-205ENST00000595993 UBE2D4Q9Y2X8 147 aa10.38□□□□□ -0.75
USHBP1-205ENST00000595993 USP17L23D6RBM5 183 aa10.37□□□□□ -0.75
USHBP1-205ENST00000595993 NDUFA5Q16718 116 aa10.37□□□□□ -0.75
USHBP1-205ENST00000595993 SCXQ7RTU7 201 aa10.37□□□□□ -0.75
USHBP1-205ENST00000595993 SLC7A5P1Q8MH63 180 aa10.37□□□□□ -0.75
USHBP1-205ENST00000595993 SVBPQ8N300 66 aa10.37□□□□□ -0.75
USHBP1-205ENST00000595993 TMEM101Q96IK0 257 aa10.37□□□□□ -0.75
USHBP1-205ENST00000595993 CDC42SE2Q9NRR3 84 aa10.37□□□□□ -0.75
USHBP1-205ENST00000595993 LOC389332A0A1B0GUA5 103 aa10.36□□□□□ -0.75
USHBP1-205ENST00000595993 SNAPINO95295 136 aa10.36□□□□□ -0.75
USHBP1-205ENST00000595993 RPL39P62891 51 aaKnown RBP10.36□□□□□ -0.75
USHBP1-205ENST00000595993 SERTAD4-AS1Q5TG53 156 aa10.36□□□□□ -0.75
USHBP1-205ENST00000595993 MAP1LC3AQ9H492 121 aa10.36□□□□□ -0.75
USHBP1-205ENST00000595993 TGIF2-C20orf24A0A0A6YYL0 155 aa10.35□□□□□ -0.75
USHBP1-205ENST00000595993 GNB1LQ9BYB4 327 aa10.35□□□□□ -0.75
USHBP1-205ENST00000595993 GAGE12HA6NDE8 117 aa10.34□□□□□ -0.75
USHBP1-205ENST00000595993 RNASE13Q5GAN3 156 aaKnown RBP10.34□□□□□ -0.75
USHBP1-205ENST00000595993 Q6ZUT4 128 aa10.34□□□□□ -0.75
USHBP1-205ENST00000595993 ZNF664Q8N3J9 261 aa10.34□□□□□ -0.75
USHBP1-205ENST00000595993 CHCHD10Q8WYQ3 142 aaPredicted RBP10.34□□□□□ -0.75
USHBP1-205ENST00000595993 FAM104AQ969W3 186 aa10.34□□□□□ -0.75
USHBP1-205ENST00000595993 CHAC1Q9BUX1 264 aa10.34□□□□□ -0.75
USHBP1-205ENST00000595993 TIMM21Q9BVV7 248 aa10.34□□□□□ -0.75
USHBP1-205ENST00000595993 CSDC2Q9Y534 153 aaKnown RBP10.34□□□□□ -0.75
USHBP1-205ENST00000595993 LINC00959A0A1B0GUT2 108 aa10.33□□□□□ -0.76
USHBP1-205ENST00000595993 OXTP01178 125 aa10.33□□□□□ -0.76
USHBP1-205ENST00000595993 LINC01620Q4KN68 170 aa10.33□□□□□ -0.76
USHBP1-205ENST00000595993 Q8N8P6 123 aa10.33□□□□□ -0.76
USHBP1-205ENST00000595993 PRSS1P07477 247 aa10.32□□□□□ -0.76
USHBP1-205ENST00000595993 RAB5AP20339 215 aa10.32□□□□□ -0.76
USHBP1-205ENST00000595993 DGAT2L7PQ6IED9 249 aa10.32□□□□□ -0.76
USHBP1-205ENST00000595993 TMEM18Q96B42 140 aa10.32□□□□□ -0.76
USHBP1-205ENST00000595993 MRPL18Q9H0U6 180 aaKnown RBP10.32□□□□□ -0.76
USHBP1-205ENST00000595993 COX19Q49B96 90 aa10.31□□□□□ -0.76
USHBP1-205ENST00000595993 C14orf177Q52M58 125 aa10.31□□□□□ -0.76
USHBP1-205ENST00000595993 YPEL4Q96NS1 127 aa10.31□□□□□ -0.76
USHBP1-205ENST00000595993 OPRPNQ99935 248 aaPredicted RBP10.31□□□□□ -0.76
USHBP1-205ENST00000595993 ALKBH7Q9BT30 221 aaPredicted RBP10.31□□□□□ -0.76
USHBP1-205ENST00000595993 CCL25O15444 150 aa10.3□□□□□ -0.76
USHBP1-205ENST00000595993 MT-ND6P03923 174 aa10.3□□□□□ -0.76
USHBP1-205ENST00000595993 IFI27P40305 119 aaPredicted RBP10.3□□□□□ -0.76
USHBP1-205ENST00000595993 XCL1P47992 114 aa10.3□□□□□ -0.76
USHBP1-205ENST00000595993 SMAGPQ0VAQ4 97 aa10.3□□□□□ -0.76
USHBP1-205ENST00000595993 FOXI1Q12951 378 aa10.3□□□□□ -0.76
USHBP1-205ENST00000595993 C15orf56Q8N910 161 aa10.3□□□□□ -0.76
USHBP1-205ENST00000595993 CIRBP-AS1Q8TBR5 109 aa10.3□□□□□ -0.76
USHBP1-205ENST00000595993 SPANXA1Q9NS26 97 aa10.3□□□□□ -0.76
USHBP1-205ENST00000595993 NXT2Q9NPJ8 142 aaKnown RBP10.29□□□□□ -0.76
USHBP1-205ENST00000595993 FABP9Q0Z7S8 132 aa10.28□□□□□ -0.76
USHBP1-205ENST00000595993 MRPS36P82909 103 aaKnown RBP10.27□□□□□ -0.77
USHBP1-205ENST00000595993 SS18Q15532 418 aa10.27□□□□□ -0.77
USHBP1-205ENST00000595993 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
USHBP1-205ENST00000595993 TRAV13-1A0A0B4J241 112 aa10.26□□□□□ -0.77
USHBP1-205ENST00000595993 ORMDL2Q53FV1 153 aa10.26□□□□□ -0.77
USHBP1-205ENST00000595993 C2orf66Q6UXQ4 117 aa10.26□□□□□ -0.77
USHBP1-205ENST00000595993 IGLV4-3A0A075B6K6 122 aa10.25□□□□□ -0.77
USHBP1-205ENST00000595993 hDV102S1A0JD36 115 aa10.25□□□□□ -0.77
USHBP1-205ENST00000595993 K7EMI3 77 aa10.25□□□□□ -0.77
USHBP1-205ENST00000595993 CD164L2Q6UWJ8 174 aa10.25□□□□□ -0.77
USHBP1-205ENST00000595993 CYSLTR1Q9Y271 337 aa10.25□□□□□ -0.77
USHBP1-205ENST00000595993 PYGO1Q9Y3Y4 419 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms