RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 IGHV3OR16-12A0A075B7B8 117 aa11.87□□□□□ -0.51
SIN3B-206ENST00000595541 NDUFA1O15239 70 aa11.86□□□□□ -0.51
SIN3B-206ENST00000595541 SLURP1P55000 103 aa11.86□□□□□ -0.51
SIN3B-206ENST00000595541 C3orf56Q8N813 242 aa11.86□□□□□ -0.51
SIN3B-206ENST00000595541 LINC00308Q8TCZ7 52 aa11.86□□□□□ -0.51
SIN3B-206ENST00000595541 Q9H8V8 135 aa11.86□□□□□ -0.51
SIN3B-206ENST00000595541 VPREB3Q9UKI3 123 aa11.86□□□□□ -0.51
SIN3B-206ENST00000595541 LINC00694P0DN24 101 aa11.85□□□□□ -0.51
SIN3B-206ENST00000595541 C11orf72Q8NBR9 251 aa11.85□□□□□ -0.51
SIN3B-206ENST00000595541 FBN2P35556 2912 aa11.85□□□□□ -0.51
SIN3B-206ENST00000595541 TIMM17BO60830 172 aa11.85□□□□□ -0.51
SIN3B-206ENST00000595541 MYO9AB2RTY4 2548 aa11.85□□□□□ -0.51
SIN3B-206ENST00000595541 IGLV5-45A0A087WSX0 123 aa11.84□□□□□ -0.51
SIN3B-206ENST00000595541 IGHV3-53P01767 116 aa11.84□□□□□ -0.51
SIN3B-206ENST00000595541 LINC00242Q5T6M2 205 aa11.84□□□□□ -0.51
SIN3B-206ENST00000595541 MAPK1IP1LQ8NDC0 245 aa11.84□□□□□ -0.51
SIN3B-206ENST00000595541 AKAP9Q99996 3911 aa11.84□□□□□ -0.51
SIN3B-206ENST00000595541 NIPBLQ6KC79 2804 aaeCLIP11.84□□□□□ -0.51
SIN3B-206ENST00000595541 FAM240AA0A1B0GVK7 77 aa11.84□□□□□ -0.51
SIN3B-206ENST00000595541 TMEM89A2RUT3 159 aa11.84□□□□□ -0.51
SIN3B-206ENST00000595541 NOTCH3Q9UM47 2321 aa11.83□□□□□ -0.51
SIN3B-206ENST00000595541 CHD6Q8TD26 2715 aa11.83□□□□□ -0.52
SIN3B-206ENST00000595541 MEIG1Q5JSS6 88 aa11.83□□□□□ -0.52
SIN3B-206ENST00000595541 SMCR5Q8TEV8 140 aa11.83□□□□□ -0.52
SIN3B-206ENST00000595541 TIRAPP58753 221 aa11.83□□□□□ -0.52
SIN3B-206ENST00000595541 IGLV5-39A0A0G2JS06 123 aa11.82□□□□□ -0.52
SIN3B-206ENST00000595541 A8MTW9 85 aa11.82□□□□□ -0.52
SIN3B-206ENST00000595541 B4DSR2 109 aa11.82□□□□□ -0.52
SIN3B-206ENST00000595541 LINC01587Q99440 93 aa11.82□□□□□ -0.52
SIN3B-206ENST00000595541 C22orf24Q9Y442 160 aa11.82□□□□□ -0.52
SIN3B-206ENST00000595541 ZNF415Q09FC8 603 aa11.81□□□□□ -0.52
SIN3B-206ENST00000595541 MRPL23Q16540 153 aaKnown RBP11.81□□□□□ -0.52
SIN3B-206ENST00000595541 DGAT2L7PQ6IED9 249 aa11.8□□□□□ -0.52
SIN3B-206ENST00000595541 TRBV7-7A0A0K0K1E9 115 aa11.8□□□□□ -0.52
SIN3B-206ENST00000595541 FAM218AQ96MZ4 157 aa11.8□□□□□ -0.52
SIN3B-206ENST00000595541 SMIM1B2RUZ4 78 aa11.79□□□□□ -0.52
SIN3B-206ENST00000595541 COX7A2LO14548 114 aa11.79□□□□□ -0.52
SIN3B-206ENST00000595541 BEAN1Q3B7T3 259 aa11.79□□□□□ -0.52
SIN3B-206ENST00000595541 UBE2E2Q96LR5 201 aa11.79□□□□□ -0.52
SIN3B-206ENST00000595541 TEX15Q9BXT5 2789 aa11.79□□□□□ -0.52
SIN3B-206ENST00000595541 ZNF702PQ9H963 129 aa11.79□□□□□ -0.52
SIN3B-206ENST00000595541 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
SIN3B-206ENST00000595541 DOPEY1Q5JWR5 2465 aa11.78□□□□□ -0.52
SIN3B-206ENST00000595541 CIRBPQ14011 172 aaKnown RBP11.78□□□□□ -0.52
SIN3B-206ENST00000595541 NTM-AS1Q6ZSK4 140 aa11.78□□□□□ -0.52
SIN3B-206ENST00000595541 PKD1L2Q7Z442 2459 aa11.78□□□□□ -0.52
SIN3B-206ENST00000595541 PIK3CD-AS1Q5SR53 167 aa11.78□□□□□ -0.52
SIN3B-206ENST00000595541 ANKRD17O75179 2603 aaKnown RBP11.77□□□□□ -0.52
SIN3B-206ENST00000595541 RS1O15537 224 aa11.77□□□□□ -0.53
SIN3B-206ENST00000595541 DAZ2Q13117 558 aaKnown RBP11.77□□□□□ -0.53
SIN3B-206ENST00000595541 DAZ4Q86SG3 579 aaKnown RBP11.77□□□□□ -0.53
SIN3B-206ENST00000595541 DNAJC30Q96LL9 226 aa11.77□□□□□ -0.53
SIN3B-206ENST00000595541 MAP6D1Q9H9H5 199 aa11.77□□□□□ -0.53
SIN3B-206ENST00000595541 DAZ3Q9NR90 486 aaKnown RBP11.77□□□□□ -0.53
SIN3B-206ENST00000595541 Q96MF0 132 aa11.76□□□□□ -0.53
SIN3B-206ENST00000595541 FAM236AA0A1B0GUQ0 79 aa11.76□□□□□ -0.53
SIN3B-206ENST00000595541 FAM236BA0A1B0GV22 79 aa11.76□□□□□ -0.53
SIN3B-206ENST00000595541 XCL2Q9UBD3 114 aa11.76□□□□□ -0.53
SIN3B-206ENST00000595541 WNK1Q9H4A3 2382 aa11.76□□□□□ -0.53
SIN3B-206ENST00000595541 NF1P21359 2839 aa11.76□□□□□ -0.53
SIN3B-206ENST00000595541 NBPF19A0A087WUL8 3843 aa11.75□□□□□ -0.53
SIN3B-206ENST00000595541 HERVK_113P63121 156 aa11.75□□□□□ -0.53
SIN3B-206ENST00000595541 F5H768 121 aa11.75□□□□□ -0.53
SIN3B-206ENST00000595541 PRIMA1Q86XR5 153 aa11.75□□□□□ -0.53
SIN3B-206ENST00000595541 BAALC-AS2P0C853 105 aa11.73□□□□□ -0.53
SIN3B-206ENST00000595541 MYO18BQ8IUG5 2567 aa11.73□□□□□ -0.53
SIN3B-206ENST00000595541 EPG5Q9HCE0 2579 aa11.73□□□□□ -0.53
SIN3B-206ENST00000595541 Q9HAA7 133 aa11.73□□□□□ -0.53
SIN3B-206ENST00000595541 JMJD1CQ15652 2540 aa11.73□□□□□ -0.53
SIN3B-206ENST00000595541 CSDC2Q9Y534 153 aaKnown RBP11.73□□□□□ -0.53
SIN3B-206ENST00000595541 PRORYQ9H606 182 aa11.72□□□□□ -0.53
SIN3B-206ENST00000595541 TRGV1A0A0A0MS02 117 aa11.71□□□□□ -0.53
SIN3B-206ENST00000595541 C1orf158Q8N1D5 194 aa11.71□□□□□ -0.53
SIN3B-206ENST00000595541 TLN2Q9Y4G6 2542 aa11.71□□□□□ -0.53
SIN3B-206ENST00000595541 A0A096LNT2 108 aa11.71□□□□□ -0.54
SIN3B-206ENST00000595541 CDC42SE2Q9NRR3 84 aa11.71□□□□□ -0.54
SIN3B-206ENST00000595541 C9orf129Q5T035 196 aaKnown RBP11.7□□□□□ -0.54
SIN3B-206ENST00000595541 FAM19A3Q7Z5A8 133 aa11.7□□□□□ -0.54
SIN3B-206ENST00000595541 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
SIN3B-206ENST00000595541 INSP01308 110 aa11.7□□□□□ -0.54
SIN3B-206ENST00000595541 SDIM1Q6ZPB5 146 aa11.7□□□□□ -0.54
SIN3B-206ENST00000595541 Q6ZTI0 123 aa11.7□□□□□ -0.54
SIN3B-206ENST00000595541 IGSF10Q6WRI0 2623 aa11.7□□□□□ -0.54
SIN3B-206ENST00000595541 SETXQ7Z333 2677 aaKnown RBP11.69□□□□□ -0.54
SIN3B-206ENST00000595541 C5orf47Q569G3 176 aa11.69□□□□□ -0.54
SIN3B-206ENST00000595541 LOC107984640A0A0U1RRK4 108 aa11.69□□□□□ -0.54
SIN3B-206ENST00000595541 TRACP01848 142 aa11.69□□□□□ -0.54
SIN3B-206ENST00000595541 ACYP1P07311 99 aa11.69□□□□□ -0.54
SIN3B-206ENST00000595541 DEFB114Q30KQ6 69 aa11.69□□□□□ -0.54
SIN3B-206ENST00000595541 Q6YL49 198 aa11.69□□□□□ -0.54
SIN3B-206ENST00000595541 LINC00337Q8N6G1 96 aa11.68□□□□□ -0.54
SIN3B-206ENST00000595541 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
SIN3B-206ENST00000595541 ODF3L2Q3SX64 289 aa11.68□□□□□ -0.54
SIN3B-206ENST00000595541 LINC00643Q86TS7 51 aa11.67□□□□□ -0.54
SIN3B-206ENST00000595541 TMEM126AQ9H061 195 aa11.67□□□□□ -0.54
SIN3B-206ENST00000595541 ACACBO00763 2458 aa11.67□□□□□ -0.54
SIN3B-206ENST00000595541 SETD2Q9BYW2 2564 aaPredicted RBP11.67□□□□□ -0.54
SIN3B-206ENST00000595541 IGKV2-28A0A075B6P5 120 aa11.67□□□□□ -0.54
SIN3B-206ENST00000595541 IGKV2D-28P01615 120 aa11.67□□□□□ -0.54
SIN3B-206ENST00000595541 KHDC1LQ5JSQ8 128 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms