RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PRKDCP78527 4128 aaKnown RBP10.57□□□□□ -0.72
VRK3-207ENST00000594092 ANKRD39Q53RE8 183 aa10.56□□□□□ -0.72
VRK3-207ENST00000594092 TMEM97Q5BJF2 176 aa10.56□□□□□ -0.72
VRK3-207ENST00000594092 TRBV25-1A0A075B6N4 114 aa10.56□□□□□ -0.72
VRK3-207ENST00000594092 A0A096LPF7 62 aa10.56□□□□□ -0.72
VRK3-207ENST00000594092 SMAGPQ0VAQ4 97 aa10.56□□□□□ -0.72
VRK3-207ENST00000594092 ZC2HC1BQ5TFG8 222 aa10.56□□□□□ -0.72
VRK3-207ENST00000594092 CEMP1Q6PRD7 247 aaPredicted RBP10.56□□□□□ -0.72
VRK3-207ENST00000594092 TIMM21Q9BVV7 248 aa10.56□□□□□ -0.72
VRK3-207ENST00000594092 DEFB131BA0A096LNP1 70 aa10.55□□□□□ -0.72
VRK3-207ENST00000594092 TMEM243Q9BU79 118 aa10.55□□□□□ -0.72
VRK3-207ENST00000594092 ICOSQ9Y6W8 199 aa10.55□□□□□ -0.72
VRK3-207ENST00000594092 TRBV6-8A0A0A6YYG3 113 aa10.54□□□□□ -0.72
VRK3-207ENST00000594092 UBE2L6O14933 153 aa10.54□□□□□ -0.72
VRK3-207ENST00000594092 NHLRC4P0CG21 123 aaPredicted RBP10.54□□□□□ -0.72
VRK3-207ENST00000594092 MRPL23Q16540 153 aaKnown RBP10.54□□□□□ -0.72
VRK3-207ENST00000594092 DGAT2L7PQ6IED9 249 aa10.54□□□□□ -0.72
VRK3-207ENST00000594092 IGLV4-69A0A075B6H9 119 aa10.54□□□□□ -0.72
VRK3-207ENST00000594092 H3BNG1 76 aa10.54□□□□□ -0.72
VRK3-207ENST00000594092 SLC25A34Q6PIV7 304 aa10.54□□□□□ -0.72
VRK3-207ENST00000594092 AMELXQ99217 191 aa10.54□□□□□ -0.72
VRK3-207ENST00000594092 H7C423 109 aa10.53□□□□□ -0.72
VRK3-207ENST00000594092 COX8AP10176 69 aa10.53□□□□□ -0.72
VRK3-207ENST00000594092 TCTAP57738 103 aa10.53□□□□□ -0.72
VRK3-207ENST00000594092 MRPS36P82909 103 aaKnown RBP10.53□□□□□ -0.72
VRK3-207ENST00000594092 STAB2Q8WWQ8 2551 aa10.53□□□□□ -0.72
VRK3-207ENST00000594092 FGF6P10767 208 aa10.52□□□□□ -0.73
VRK3-207ENST00000594092 HNRNPA3P51991 378 aaKnown RBP10.52□□□□□ -0.73
VRK3-207ENST00000594092 Q6ZUT4 128 aa10.52□□□□□ -0.73
VRK3-207ENST00000594092 MRPL52Q86TS9 123 aaKnown RBP10.52□□□□□ -0.73
VRK3-207ENST00000594092 FAM104AQ969W3 186 aa10.52□□□□□ -0.73
VRK3-207ENST00000594092 C2orf88Q9BSF0 95 aa10.52□□□□□ -0.73
VRK3-207ENST00000594092 CSDC2Q9Y534 153 aaKnown RBP10.52□□□□□ -0.73
VRK3-207ENST00000594092 TRAV10A0A0B4J240 114 aa10.51□□□□□ -0.73
VRK3-207ENST00000594092 NMUP48645 174 aa10.51□□□□□ -0.73
VRK3-207ENST00000594092 AMMECR1LQ6DCA0 310 aa10.51□□□□□ -0.73
VRK3-207ENST00000594092 SH2D6Q7Z4S9 175 aa10.51□□□□□ -0.73
VRK3-207ENST00000594092 C11orf86A6NJI1 115 aa10.51□□□□□ -0.73
VRK3-207ENST00000594092 RNASE13Q5GAN3 156 aaKnown RBP10.51□□□□□ -0.73
VRK3-207ENST00000594092 NFE4Q86UQ8 179 aa10.5□□□□□ -0.73
VRK3-207ENST00000594092 TMEM101Q96IK0 257 aa10.5□□□□□ -0.73
VRK3-207ENST00000594092 CHAC1Q9BUX1 264 aa10.5□□□□□ -0.73
VRK3-207ENST00000594092 OR5A1Q8NGJ0 315 aa10.49□□□□□ -0.73
VRK3-207ENST00000594092 CHCHD5Q9BSY4 110 aa10.49□□□□□ -0.73
VRK3-207ENST00000594092 ZNF25P17030 456 aaPredicted RBP10.49□□□□□ -0.73
VRK3-207ENST00000594092 HERVK_113P61574 105 aa10.49□□□□□ -0.73
VRK3-207ENST00000594092 GAGE6Q13070 117 aa10.49□□□□□ -0.73
VRK3-207ENST00000594092 IGKV2D-26A0A0A0MRZ7 120 aa10.48□□□□□ -0.73
VRK3-207ENST00000594092 TMEM170BQ5T4T1 132 aa10.48□□□□□ -0.73
VRK3-207ENST00000594092 BOD1L2Q8IYS8 172 aa10.48□□□□□ -0.73
VRK3-207ENST00000594092 A0A0J9YXV3 536 aa10.47□□□□□ -0.73
VRK3-207ENST00000594092 TP73-AS1Q9UF72 201 aa10.47□□□□□ -0.73
VRK3-207ENST00000594092 E9PLD3 99 aa10.47□□□□□ -0.73
VRK3-207ENST00000594092 DLEU1O43261 78 aa10.47□□□□□ -0.73
VRK3-207ENST00000594092 PCP2Q8IVA1 136 aa10.47□□□□□ -0.73
VRK3-207ENST00000594092 CDC42SE2Q9NRR3 84 aa10.47□□□□□ -0.73
VRK3-207ENST00000594092 MRPS16Q9Y3D3 137 aaKnown RBP10.47□□□□□ -0.73
VRK3-207ENST00000594092 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.74
VRK3-207ENST00000594092 LYPD5Q6UWN5 251 aa10.46□□□□□ -0.74
VRK3-207ENST00000594092 ZNF22P17026 224 aaPredicted RBP10.45□□□□□ -0.74
VRK3-207ENST00000594092 UBE2D1P51668 147 aa10.45□□□□□ -0.74
VRK3-207ENST00000594092 TIRAPP58753 221 aa10.45□□□□□ -0.74
VRK3-207ENST00000594092 LELP1Q5T871 98 aa10.45□□□□□ -0.74
VRK3-207ENST00000594092 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
VRK3-207ENST00000594092 TRAV8-6A0A0B4J262 113 aa10.44□□□□□ -0.74
VRK3-207ENST00000594092 M0R143 59 aa10.44□□□□□ -0.74
VRK3-207ENST00000594092 TMEM262E9PQX1 116 aa10.43□□□□□ -0.74
VRK3-207ENST00000594092 GEMIN7Q9H840 131 aaKnown RBP10.43□□□□□ -0.74
VRK3-207ENST00000594092 TMEM223A0PJW6 202 aa10.42□□□□□ -0.74
VRK3-207ENST00000594092 SIVA1O15304 175 aa10.42□□□□□ -0.74
VRK3-207ENST00000594092 SEC11AP67812 179 aa10.42□□□□□ -0.74
VRK3-207ENST00000594092 MPV17L2Q567V2 206 aa10.42□□□□□ -0.74
VRK3-207ENST00000594092 C15orf53Q8NAA6 179 aa10.42□□□□□ -0.74
VRK3-207ENST00000594092 TTTY13Q9BZ97 58 aa10.42□□□□□ -0.74
VRK3-207ENST00000594092 A0A1B0GUV1 79 aa10.42□□□□□ -0.74
VRK3-207ENST00000594092 RBX1P62877 108 aa10.42□□□□□ -0.74
VRK3-207ENST00000594092 ESRGQ1W209 222 aa10.42□□□□□ -0.74
VRK3-207ENST00000594092 C2orf91Q6ZV80 131 aa10.42□□□□□ -0.74
VRK3-207ENST00000594092 TRAV13-1A0A0B4J241 112 aa10.41□□□□□ -0.74
VRK3-207ENST00000594092 IGLL5B9A064 214 aa10.41□□□□□ -0.74
VRK3-207ENST00000594092 HERVK_113P63121 156 aa10.41□□□□□ -0.74
VRK3-207ENST00000594092 FAM19A3Q7Z5A8 133 aa10.41□□□□□ -0.74
VRK3-207ENST00000594092 SNHG12Q9BXW3 62 aa10.41□□□□□ -0.74
VRK3-207ENST00000594092 FBN3Q75N90 2809 aa10.41□□□□□ -0.74
VRK3-207ENST00000594092 A0A1B0GV90 55 aa10.4□□□□□ -0.74
VRK3-207ENST00000594092 EREGO14944 169 aa10.4□□□□□ -0.75
VRK3-207ENST00000594092 LINC00242Q5T6M2 205 aa10.4□□□□□ -0.75
VRK3-207ENST00000594092 MAPKAPK5-AS1Q8N8E1 139 aa10.4□□□□□ -0.75
VRK3-207ENST00000594092 MYMXA0A1B0GTQ4 84 aa10.39□□□□□ -0.75
VRK3-207ENST00000594092 H3BRM9 83 aa10.39□□□□□ -0.75
VRK3-207ENST00000594092 LEPROTO15243 131 aa10.39□□□□□ -0.75
VRK3-207ENST00000594092 Q8N3U1 123 aa10.39□□□□□ -0.75
VRK3-207ENST00000594092 IGLV5-45A0A087WSX0 123 aa10.38□□□□□ -0.75
VRK3-207ENST00000594092 BATFQ16520 125 aa10.38□□□□□ -0.75
VRK3-207ENST00000594092 DYNC2H1Q8NCM8 4307 aaKnown RBP10.38□□□□□ -0.75
VRK3-207ENST00000594092 ZNF815PA8K554 130 aa10.37□□□□□ -0.75
VRK3-207ENST00000594092 LGALS3P17931 250 aaKnown RBP10.37□□□□□ -0.75
VRK3-207ENST00000594092 PLEKHB2Q96CS7 222 aa10.37□□□□□ -0.75
VRK3-207ENST00000594092 HIGD1BQ9P298 99 aa10.37□□□□□ -0.75
VRK3-207ENST00000594092 DNAH7Q8WXX0 4024 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms