RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 RS1O15537 224 aa8.16□□□□□ -1.1
TPM4-213ENST00000591226 SPATA3Q8NHX4 192 aa8.16□□□□□ -1.1
TPM4-213ENST00000591226 PRO0461Q9UI25 63 aa8.16□□□□□ -1.1
TPM4-213ENST00000591226 TRGV1A0A0A0MS02 117 aa8.15□□□□□ -1.1
TPM4-213ENST00000591226 LINC01549A6NIU2 74 aa8.15□□□□□ -1.1
TPM4-213ENST00000591226 RHODO00212 210 aa8.15□□□□□ -1.1
TPM4-213ENST00000591226 PHLDA1Q8WV24 401 aaPredicted RBP8.15□□□□□ -1.1
TPM4-213ENST00000591226 NFE4Q86UQ8 179 aa8.15□□□□□ -1.11
TPM4-213ENST00000591226 TMEM263Q8WUH6 116 aaKnown RBP8.15□□□□□ -1.11
TPM4-213ENST00000591226 TIMM17AQ99595 171 aa8.15□□□□□ -1.11
TPM4-213ENST00000591226 E9PLD3 99 aa8.14□□□□□ -1.11
TPM4-213ENST00000591226 EIF4EBP3O60516 100 aaPredicted RBP8.14□□□□□ -1.11
TPM4-213ENST00000591226 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.14□□□□□ -1.11
TPM4-213ENST00000591226 TMEM141Q96I45 108 aa8.14□□□□□ -1.11
TPM4-213ENST00000591226 IGLL5B9A064 214 aa8.14□□□□□ -1.11
TPM4-213ENST00000591226 IGHV3-53P01767 116 aa8.14□□□□□ -1.11
TPM4-213ENST00000591226 C20orf203Q8NBC4 194 aa8.14□□□□□ -1.11
TPM4-213ENST00000591226 F8P00451 2351 aa8.13□□□□□ -1.11
TPM4-213ENST00000591226 TEP1Q99973 2627 aaKnown RBP8.13□□□□□ -1.11
TPM4-213ENST00000591226 Q6ZTI0 123 aa8.13□□□□□ -1.11
TPM4-213ENST00000591226 OPRPNQ99935 248 aaPredicted RBP8.13□□□□□ -1.11
TPM4-213ENST00000591226 EMP1P54849 157 aa8.13□□□□□ -1.11
TPM4-213ENST00000591226 PMVKQ15126 192 aa8.13□□□□□ -1.11
TPM4-213ENST00000591226 CSNK1G2-AS1Q8NCQ2 148 aa8.13□□□□□ -1.11
TPM4-213ENST00000591226 IGLV4-69A0A075B6H9 119 aa8.12□□□□□ -1.11
TPM4-213ENST00000591226 NOP10Q9NPE3 64 aaKnown RBP8.12□□□□□ -1.11
TPM4-213ENST00000591226 C3orf56Q8N813 242 aa8.12□□□□□ -1.11
TPM4-213ENST00000591226 C11orf86A6NJI1 115 aa8.11□□□□□ -1.11
TPM4-213ENST00000591226 CSDC2Q9Y534 153 aaKnown RBP8.11□□□□□ -1.11
TPM4-213ENST00000591226 PLAC8L1A1L4L8 177 aa8.11□□□□□ -1.11
TPM4-213ENST00000591226 NDUFV3P56181 108 aaKnown RBP8.11□□□□□ -1.11
TPM4-213ENST00000591226 C5orf47Q569G3 176 aa8.11□□□□□ -1.11
TPM4-213ENST00000591226 MAPKAPK5-AS1Q8N8E1 139 aa8.11□□□□□ -1.11
TPM4-213ENST00000591226 MDFIQ99750 246 aa8.11□□□□□ -1.11
TPM4-213ENST00000591226 IGHV3-38A0A0C4DH36 116 aa8.1□□□□□ -1.11
TPM4-213ENST00000591226 C16orf74Q96GX8 76 aa8.1□□□□□ -1.11
TPM4-213ENST00000591226 DAZ2Q13117 558 aaKnown RBP8.1□□□□□ -1.11
TPM4-213ENST00000591226 DNAJC30Q96LL9 226 aa8.1□□□□□ -1.11
TPM4-213ENST00000591226 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
TPM4-213ENST00000591226 SMCPP49901 116 aaPredicted RBP8.09□□□□□ -1.11
TPM4-213ENST00000591226 RRN3P1Q2M238 152 aa8.09□□□□□ -1.11
TPM4-213ENST00000591226 C9orf66Q5T8R8 295 aa8.09□□□□□ -1.11
TPM4-213ENST00000591226 CHAC1Q9BUX1 264 aa8.09□□□□□ -1.11
TPM4-213ENST00000591226 IGLV4-3A0A075B6K6 122 aa8.09□□□□□ -1.11
TPM4-213ENST00000591226 TRAV4A0A0B4J268 109 aa8.09□□□□□ -1.11
TPM4-213ENST00000591226 ZNRF2Q8NHG8 242 aa8.08□□□□□ -1.12
TPM4-213ENST00000591226 PRADC1Q9BSG0 188 aa8.08□□□□□ -1.12
TPM4-213ENST00000591226 CHCHD7Q9BUK0 85 aa8.08□□□□□ -1.12
TPM4-213ENST00000591226 HIGD1BQ9P298 99 aa8.08□□□□□ -1.12
TPM4-213ENST00000591226 CEMP1Q6PRD7 247 aaPredicted RBP8.08□□□□□ -1.12
TPM4-213ENST00000591226 PAPPA-AS1Q5QFB9 102 aa8.07□□□□□ -1.12
TPM4-213ENST00000591226 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
TPM4-213ENST00000591226 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.07□□□□□ -1.12
TPM4-213ENST00000591226 IGKV2-29A2NJV5 120 aaPredicted RBP8.07□□□□□ -1.12
TPM4-213ENST00000591226 K7EQD1 137 aa8.07□□□□□ -1.12
TPM4-213ENST00000591226 MEIG1Q5JSS6 88 aa8.07□□□□□ -1.12
TPM4-213ENST00000591226 CARD19Q96LW7 228 aa8.07□□□□□ -1.12
TPM4-213ENST00000591226 PYGO1Q9Y3Y4 419 aa8.07□□□□□ -1.12
TPM4-213ENST00000591226 TRRAPQ9Y4A5 3859 aa8.07□□□□□ -1.12
TPM4-213ENST00000591226 A0A0U1RRA0 63 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 TTC32Q5I0X7 151 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 CEND1Q8N111 149 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 TRBV7-3A0A075B6L6 115 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 TRGV2A0A075B6R0 118 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 GAGE2BQ13066 116 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 C12orf74Q32Q52 190 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 GAGE2EQ4V326 116 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 SLC25A29Q8N8R3 303 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 ATP6V0E2Q8NHE4 81 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 OVOL2Q9BRP0 275 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 GAGE2DQ9UEU5 116 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 NBEAL2Q6ZNJ1 2754 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 MYMXA0A1B0GTQ4 84 aa8.06□□□□□ -1.12
TPM4-213ENST00000591226 RNASE13Q5GAN3 156 aaKnown RBP8.06□□□□□ -1.12
TPM4-213ENST00000591226 H3BS24 57 aa8.05□□□□□ -1.12
TPM4-213ENST00000591226 IFITM1P13164 125 aa8.05□□□□□ -1.12
TPM4-213ENST00000591226 SERTAD4-AS1Q5TG53 156 aa8.05□□□□□ -1.12
TPM4-213ENST00000591226 SFTA2Q6UW10 78 aa8.05□□□□□ -1.12
TPM4-213ENST00000591226 UBE2D4Q9Y2X8 147 aa8.05□□□□□ -1.12
TPM4-213ENST00000591226 A0A0J9YXV3 536 aa8.05□□□□□ -1.12
TPM4-213ENST00000591226 TRBV10-1A0A0K0K1A3 114 aa8.05□□□□□ -1.12
TPM4-213ENST00000591226 HERVK_113P61574 105 aa8.05□□□□□ -1.12
TPM4-213ENST00000591226 RPL36AP83881 106 aaKnown RBP8.05□□□□□ -1.12
TPM4-213ENST00000591226 RPL36ALQ969Q0 106 aaKnown RBP8.05□□□□□ -1.12
TPM4-213ENST00000591226 AMELXQ99217 191 aa8.04□□□□□ -1.12
TPM4-213ENST00000591226 SPANXA1Q9NS26 97 aa8.04□□□□□ -1.12
TPM4-213ENST00000591226 ZNF815PA8K554 130 aa8.04□□□□□ -1.12
TPM4-213ENST00000591226 PPDPFLQ8WWR9 84 aa8.04□□□□□ -1.12
TPM4-213ENST00000591226 LOC107984640A0A0U1RRK4 108 aa8.03□□□□□ -1.12
TPM4-213ENST00000591226 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
TPM4-213ENST00000591226 ZNF22P17026 224 aaPredicted RBP8.03□□□□□ -1.12
TPM4-213ENST00000591226 UBE2D3P61077 147 aa8.03□□□□□ -1.12
TPM4-213ENST00000591226 UBE2D2P62837 147 aa8.03□□□□□ -1.12
TPM4-213ENST00000591226 LOC100131303A0A0U1RQF7 123 aa8.02□□□□□ -1.13
TPM4-213ENST00000591226 SMIM9A6NGZ8 99 aa8.02□□□□□ -1.13
TPM4-213ENST00000591226 PLEKHB2Q96CS7 222 aa8.02□□□□□ -1.13
TPM4-213ENST00000591226 TRGV4A0A0C4DH28 118 aa8.02□□□□□ -1.13
TPM4-213ENST00000591226 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
TPM4-213ENST00000591226 SNCGO76070 127 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms