RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 XCL1P47992 114 aa11.62□□□□□ -0.55
CIRBP-227ENST00000590188 KIR2DL4Q99706 377 aa11.62□□□□□ -0.55
CIRBP-227ENST00000590188 PPP1R2P9O14990 202 aa11.61□□□□□ -0.55
CIRBP-227ENST00000590188 SLPIP03973 132 aa11.61□□□□□ -0.55
CIRBP-227ENST00000590188 S100A8P05109 93 aa11.61□□□□□ -0.55
CIRBP-227ENST00000590188 RNASE13Q5GAN3 156 aaKnown RBP11.61□□□□□ -0.55
CIRBP-227ENST00000590188 LINC00959A0A1B0GUT2 108 aa11.6□□□□□ -0.55
CIRBP-227ENST00000590188 F8W036 122 aa11.6□□□□□ -0.55
CIRBP-227ENST00000590188 PANO1I0J062 215 aa11.6□□□□□ -0.55
CIRBP-227ENST00000590188 CCL25O15444 150 aa11.6□□□□□ -0.55
CIRBP-227ENST00000590188 TNFRSF6BO95407 300 aa11.6□□□□□ -0.55
CIRBP-227ENST00000590188 FOXI1Q12951 378 aa11.6□□□□□ -0.55
CIRBP-227ENST00000590188 CLLU1Q5K131 121 aa11.6□□□□□ -0.55
CIRBP-227ENST00000590188 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
CIRBP-227ENST00000590188 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.6□□□□□ -0.55
CIRBP-227ENST00000590188 LINC00862A6NCI5 91 aa11.59□□□□□ -0.55
CIRBP-227ENST00000590188 NPYP01303 97 aa11.59□□□□□ -0.55
CIRBP-227ENST00000590188 PLA2G1BP04054 148 aaKnown RBP11.59□□□□□ -0.55
CIRBP-227ENST00000590188 CNBPP62633 177 aaKnown RBP11.59□□□□□ -0.55
CIRBP-227ENST00000590188 CFAP161Q6P656 301 aa11.59□□□□□ -0.55
CIRBP-227ENST00000590188 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
CIRBP-227ENST00000590188 ZNF664Q8N3J9 261 aa11.59□□□□□ -0.55
CIRBP-227ENST00000590188 PNRC1Q12796 327 aaPredicted RBP11.58□□□□□ -0.56
CIRBP-227ENST00000590188 SDIM1Q6ZPB5 146 aa11.58□□□□□ -0.56
CIRBP-227ENST00000590188 C20orf78Q9BR46 151 aa11.58□□□□□ -0.56
CIRBP-227ENST00000590188 UBE2D4Q9Y2X8 147 aa11.58□□□□□ -0.56
CIRBP-227ENST00000590188 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.57□□□□□ -0.56
CIRBP-227ENST00000590188 IFITM2Q01629 132 aa11.57□□□□□ -0.56
CIRBP-227ENST00000590188 SS18Q15532 418 aa11.57□□□□□ -0.56
CIRBP-227ENST00000590188 SMIM2Q9BVW6 85 aa11.57□□□□□ -0.56
CIRBP-227ENST00000590188 TRBV24-1A0A075B6N3 115 aa11.56□□□□□ -0.56
CIRBP-227ENST00000590188 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
CIRBP-227ENST00000590188 MT-ND4LP03901 98 aa11.56□□□□□ -0.56
CIRBP-227ENST00000590188 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
CIRBP-227ENST00000590188 ANAPC16Q96DE5 110 aa11.56□□□□□ -0.56
CIRBP-227ENST00000590188 MYCBP2O75592 4640 aa11.56□□□□□ -0.56
CIRBP-227ENST00000590188 TCAPO15273 167 aa11.55□□□□□ -0.56
CIRBP-227ENST00000590188 CHTF8P0CG12 524 aa11.55□□□□□ -0.56
CIRBP-227ENST00000590188 RPL39P62891 51 aaKnown RBP11.55□□□□□ -0.56
CIRBP-227ENST00000590188 Q6ZUT4 128 aa11.55□□□□□ -0.56
CIRBP-227ENST00000590188 LINC00526Q96FQ7 95 aa11.55□□□□□ -0.56
CIRBP-227ENST00000590188 TRAV13-1A0A0B4J241 112 aa11.54□□□□□ -0.56
CIRBP-227ENST00000590188 TMEM136Q6ZRR5 245 aa11.54□□□□□ -0.56
CIRBP-227ENST00000590188 TMEM18Q96B42 140 aa11.54□□□□□ -0.56
CIRBP-227ENST00000590188 PRELID3AQ96N28 172 aa11.54□□□□□ -0.56
CIRBP-227ENST00000590188 ADCYAP1P18509 176 aa11.53□□□□□ -0.56
CIRBP-227ENST00000590188 RPL32P62910 135 aaKnown RBP11.53□□□□□ -0.56
CIRBP-227ENST00000590188 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
CIRBP-227ENST00000590188 ORMDL3Q8N138 153 aa11.53□□□□□ -0.56
CIRBP-227ENST00000590188 DPH3Q96FX2 82 aa11.53□□□□□ -0.56
CIRBP-227ENST00000590188 GVQW2A0A096LPI5 108 aaPredicted RBP11.52□□□□□ -0.57
CIRBP-227ENST00000590188 PPBPP02775 128 aa11.52□□□□□ -0.57
CIRBP-227ENST00000590188 CD164L2Q6UWJ8 174 aa11.52□□□□□ -0.57
CIRBP-227ENST00000590188 FLG2Q5D862 2391 aaPredicted RBP11.52□□□□□ -0.57
CIRBP-227ENST00000590188 IGHV1-58A0A0C4DH39 117 aa11.51□□□□□ -0.57
CIRBP-227ENST00000590188 LOC389332A0A1B0GUA5 103 aa11.51□□□□□ -0.57
CIRBP-227ENST00000590188 COX6A2Q02221 97 aa11.51□□□□□ -0.57
CIRBP-227ENST00000590188 CSDC2Q9Y534 153 aaKnown RBP11.51□□□□□ -0.57
CIRBP-227ENST00000590188 SRRM2Q9UQ35 2752 aaKnown RBP11.5□□□□□ -0.57
CIRBP-227ENST00000590188 PHOX2AO14813 284 aa11.5□□□□□ -0.57
CIRBP-227ENST00000590188 OPRPNQ99935 248 aaPredicted RBP11.5□□□□□ -0.57
CIRBP-227ENST00000590188 HERC1Q15751 4861 aa11.49□□□□□ -0.57
CIRBP-227ENST00000590188 IGKV2-24A0A0C4DH68 120 aa11.49□□□□□ -0.57
CIRBP-227ENST00000590188 C1orf196B1AJZ1 125 aa11.49□□□□□ -0.57
CIRBP-227ENST00000590188 KRTAP10-4P60372 401 aaPredicted RBP11.49□□□□□ -0.57
CIRBP-227ENST00000590188 RPL37AP61513 92 aaKnown RBP11.49□□□□□ -0.57
CIRBP-227ENST00000590188 PRSS3P2Q8NHM4 247 aa11.49□□□□□ -0.57
CIRBP-227ENST00000590188 TIMM21Q9BVV7 248 aa11.49□□□□□ -0.57
CIRBP-227ENST00000590188 TMEM218A2RU14 115 aa11.48□□□□□ -0.57
CIRBP-227ENST00000590188 RAB5AP20339 215 aa11.48□□□□□ -0.57
CIRBP-227ENST00000590188 MALP21145 153 aa11.48□□□□□ -0.57
CIRBP-227ENST00000590188 UQCC3Q6UW78 93 aa11.48□□□□□ -0.57
CIRBP-227ENST00000590188 C5orf38Q86SI9 138 aa11.48□□□□□ -0.57
CIRBP-227ENST00000590188 A0A087WYN8 130 aa11.47□□□□□ -0.57
CIRBP-227ENST00000590188 ZNF561-AS1K7EIQ3 104 aa11.47□□□□□ -0.57
CIRBP-227ENST00000590188 COX7A2LO14548 114 aa11.47□□□□□ -0.57
CIRBP-227ENST00000590188 CIRBPQ14011 172 aaKnown RBP11.47□□□□□ -0.57
CIRBP-227ENST00000590188 COMMD7Q86VX2 200 aa11.47□□□□□ -0.57
CIRBP-227ENST00000590188 SPACA4Q8TDM5 124 aa11.47□□□□□ -0.57
CIRBP-227ENST00000590188 MAJINQ3KP22 176 aa11.46□□□□□ -0.57
CIRBP-227ENST00000590188 FAM104AQ969W3 186 aa11.46□□□□□ -0.57
CIRBP-227ENST00000590188 CARD19Q96LW7 228 aa11.46□□□□□ -0.57
CIRBP-227ENST00000590188 MAP1LC3AQ9H492 121 aa11.46□□□□□ -0.57
CIRBP-227ENST00000590188 SPANXA1Q9NS26 97 aa11.46□□□□□ -0.57
CIRBP-227ENST00000590188 PKHD1L1Q86WI1 4243 aa11.45□□□□□ -0.58
CIRBP-227ENST00000590188 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
CIRBP-227ENST00000590188 IFITM10A6NMD0 228 aa11.44□□□□□ -0.58
CIRBP-227ENST00000590188 A0A096LNI7 61 aa11.43□□□□□ -0.58
CIRBP-227ENST00000590188 J3QL48 77 aa11.43□□□□□ -0.58
CIRBP-227ENST00000590188 SYCNQ0VAF6 134 aa11.43□□□□□ -0.58
CIRBP-227ENST00000590188 CTDSP1Q9GZU7 261 aa11.43□□□□□ -0.58
CIRBP-227ENST00000590188 LAMTOR2Q9Y2Q5 125 aa11.43□□□□□ -0.58
CIRBP-227ENST00000590188 FAT3Q8TDW7 4589 aa11.42□□□□□ -0.58
CIRBP-227ENST00000590188 IFI27P40305 119 aaPredicted RBP11.42□□□□□ -0.58
CIRBP-227ENST00000590188 KIAA1644Q3SXP7 199 aa11.42□□□□□ -0.58
CIRBP-227ENST00000590188 Q8N8P6 123 aa11.42□□□□□ -0.58
CIRBP-227ENST00000590188 PRSS47A8MTI9 375 aa11.41□□□□□ -0.58
CIRBP-227ENST00000590188 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
CIRBP-227ENST00000590188 MRPS36P82909 103 aaKnown RBP11.41□□□□□ -0.58
CIRBP-227ENST00000590188 Q6ZRU5 148 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms