RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 REG3AQ06141 175 aa9.17□□□□□ -0.94
VMP1-210ENST00000589823 CLPSL2Q6UWE3 100 aa9.17□□□□□ -0.94
VMP1-210ENST00000589823 ZNF664Q8N3J9 261 aa9.17□□□□□ -0.94
VMP1-210ENST00000589823 RMI2Q96E14 147 aa9.17□□□□□ -0.94
VMP1-210ENST00000589823 CDC42SE2Q9NRR3 84 aa9.17□□□□□ -0.94
VMP1-210ENST00000589823 PYGO1Q9Y3Y4 419 aa9.17□□□□□ -0.94
VMP1-210ENST00000589823 IGKV3OR2-268A0A0C4DH90 116 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST1H2BKO60814 126 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST1H2BJP06899 126 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST1H2BOP23527 126 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST1H2BBP33778 126 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST1H2BDP58876 126 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST1H2BCP62807 126 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST2H2BEQ16778 126 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.16□□□□□ -0.94
VMP1-210ENST00000589823 ENHOQ6UWT2 76 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST1H2BHQ93079 126 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST1H2BNQ99877 126 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 HIST1H2BMQ99879 126 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 PRR34Q9NV39 138 aa9.16□□□□□ -0.94
VMP1-210ENST00000589823 DNAH2Q9P225 4427 aa9.15□□□□□ -0.94
VMP1-210ENST00000589823 HSBP1O75506 76 aa9.15□□□□□ -0.94
VMP1-210ENST00000589823 HBDP02042 147 aa9.15□□□□□ -0.94
VMP1-210ENST00000589823 MRPS36P82909 103 aaKnown RBP9.15□□□□□ -0.94
VMP1-210ENST00000589823 MIAQ16674 131 aa9.15□□□□□ -0.94
VMP1-210ENST00000589823 Q6ZUT4 128 aa9.15□□□□□ -0.94
VMP1-210ENST00000589823 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
VMP1-210ENST00000589823 SERF1AO75920 110 aa9.14□□□□□ -0.95
VMP1-210ENST00000589823 NPSP0C0P6 89 aa9.14□□□□□ -0.95
VMP1-210ENST00000589823 PMCHL1Q16048 86 aa9.14□□□□□ -0.95
VMP1-210ENST00000589823 PAPPA-AS1Q5QFB9 102 aa9.14□□□□□ -0.95
VMP1-210ENST00000589823 Q6ZN92 141 aa9.14□□□□□ -0.95
VMP1-210ENST00000589823 ERASQ7Z444 233 aa9.14□□□□□ -0.95
VMP1-210ENST00000589823 TMEM141Q96I45 108 aa9.14□□□□□ -0.95
VMP1-210ENST00000589823 TIMM17AQ99595 171 aa9.14□□□□□ -0.95
VMP1-210ENST00000589823 C1orf43Q9BWL3 253 aa9.14□□□□□ -0.95
VMP1-210ENST00000589823 TM2D2Q9BX73 214 aa9.14□□□□□ -0.95
VMP1-210ENST00000589823 IGLV4-3A0A075B6K6 122 aa9.13□□□□□ -0.95
VMP1-210ENST00000589823 IGKV2D-24A0A075B6R9 120 aa9.13□□□□□ -0.95
VMP1-210ENST00000589823 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
VMP1-210ENST00000589823 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
VMP1-210ENST00000589823 PSCAO43653 123 aa9.13□□□□□ -0.95
VMP1-210ENST00000589823 RNASE13Q5GAN3 156 aaKnown RBP9.13□□□□□ -0.95
VMP1-210ENST00000589823 OPRPNQ99935 248 aaPredicted RBP9.13□□□□□ -0.95
VMP1-210ENST00000589823 COX11Q9Y6N1 276 aa9.13□□□□□ -0.95
VMP1-210ENST00000589823 A0A096LNJ9 63 aa9.12□□□□□ -0.95
VMP1-210ENST00000589823 TEX43Q6ZNM6 134 aa9.12□□□□□ -0.95
VMP1-210ENST00000589823 VCX2Q9H322 139 aa9.12□□□□□ -0.95
VMP1-210ENST00000589823 RYR3Q15413 4870 aa9.12□□□□□ -0.95
VMP1-210ENST00000589823 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
VMP1-210ENST00000589823 LINC00959A0A1B0GUT2 108 aa9.11□□□□□ -0.95
VMP1-210ENST00000589823 IFITM10A6NMD0 228 aa9.11□□□□□ -0.95
VMP1-210ENST00000589823 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.11□□□□□ -0.95
VMP1-210ENST00000589823 NDUFA6P56556 154 aa9.11□□□□□ -0.95
VMP1-210ENST00000589823 LINC00310P59036 64 aa9.11□□□□□ -0.95
VMP1-210ENST00000589823 SS18Q15532 418 aa9.11□□□□□ -0.95
VMP1-210ENST00000589823 FAM19A2Q8N3H0 131 aa9.11□□□□□ -0.95
VMP1-210ENST00000589823 C2orf88Q9BSF0 95 aa9.11□□□□□ -0.95
VMP1-210ENST00000589823 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
VMP1-210ENST00000589823 CCL25O15444 150 aa9.1□□□□□ -0.95
VMP1-210ENST00000589823 ATP5LO75964 103 aa9.1□□□□□ -0.95
VMP1-210ENST00000589823 PDZD11Q5EBL8 140 aa9.1□□□□□ -0.95
VMP1-210ENST00000589823 FAM104AQ969W3 186 aa9.1□□□□□ -0.95
VMP1-210ENST00000589823 FRAS1Q86XX4 4008 aa9.1□□□□□ -0.95
VMP1-210ENST00000589823 DNAH10Q8IVF4 4471 aa9.09□□□□□ -0.95
VMP1-210ENST00000589823 RTL8CO15255 209 aa9.09□□□□□ -0.95
VMP1-210ENST00000589823 NUPR1O60356 82 aa9.09□□□□□ -0.95
VMP1-210ENST00000589823 Q6ZRN7 208 aaPredicted RBP9.09□□□□□ -0.95
VMP1-210ENST00000589823 COA6Q5JTJ3 125 aaKnown RBP9.08□□□□□ -0.96
VMP1-210ENST00000589823 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
VMP1-210ENST00000589823 CHCHD10Q8WYQ3 142 aaPredicted RBP9.08□□□□□ -0.96
VMP1-210ENST00000589823 AMELXQ99217 191 aa9.08□□□□□ -0.96
VMP1-210ENST00000589823 DNAH17Q9UFH2 4485 aa9.08□□□□□ -0.96
VMP1-210ENST00000589823 GAGE12HA6NDE8 117 aa9.07□□□□□ -0.96
VMP1-210ENST00000589823 LEPROTL1O95214 131 aa9.07□□□□□ -0.96
VMP1-210ENST00000589823 XCL1P47992 114 aa9.07□□□□□ -0.96
VMP1-210ENST00000589823 ZC2HC1BQ5TFG8 222 aa9.07□□□□□ -0.96
VMP1-210ENST00000589823 BAALCQ8WXS3 180 aa9.07□□□□□ -0.96
VMP1-210ENST00000589823 S100A6P06703 90 aa9.06□□□□□ -0.96
VMP1-210ENST00000589823 LINC00173Q6ZV60 143 aa9.06□□□□□ -0.96
VMP1-210ENST00000589823 IFI27L1Q96BM0 104 aa9.06□□□□□ -0.96
VMP1-210ENST00000589823 HSPB8Q9UJY1 196 aa9.06□□□□□ -0.96
VMP1-210ENST00000589823 PRSS29PA6NIE9 313 aa9.05□□□□□ -0.96
VMP1-210ENST00000589823 PRSS1P07477 247 aa9.05□□□□□ -0.96
VMP1-210ENST00000589823 FABP4P15090 132 aa9.05□□□□□ -0.96
VMP1-210ENST00000589823 UBE2D1P51668 147 aa9.05□□□□□ -0.96
VMP1-210ENST00000589823 PMVKQ15126 192 aa9.05□□□□□ -0.96
VMP1-210ENST00000589823 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
VMP1-210ENST00000589823 CD164L2Q6UWJ8 174 aa9.05□□□□□ -0.96
VMP1-210ENST00000589823 EREGO14944 169 aa9.04□□□□□ -0.96
VMP1-210ENST00000589823 SEC11AP67812 179 aa9.04□□□□□ -0.96
VMP1-210ENST00000589823 TNP2Q05952 138 aa9.04□□□□□ -0.96
VMP1-210ENST00000589823 CST9LQ9H4G1 147 aa9.04□□□□□ -0.96
VMP1-210ENST00000589823 FAT2Q9NYQ8 4349 aa9.03□□□□□ -0.96
VMP1-210ENST00000589823 FOXI1Q12951 378 aa9.03□□□□□ -0.96
VMP1-210ENST00000589823 MAPKAPK5-AS1Q8N8E1 139 aa9.03□□□□□ -0.96
VMP1-210ENST00000589823 PACRGQ96M98 296 aaPredicted RBP9.03□□□□□ -0.96
VMP1-210ENST00000589823 COX7A2LO14548 114 aa9.02□□□□□ -0.97
VMP1-210ENST00000589823 LINC00242Q5T6M2 205 aa9.02□□□□□ -0.97
VMP1-210ENST00000589823 FAM19A3Q7Z5A8 133 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms