RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 TMEM18Q96B42 140 aa6.87□□□□□ -1.31
CLPTM1-211ENST00000589347 PKIGQ9Y2B9 76 aa6.87□□□□□ -1.31
CLPTM1-211ENST00000589347 LINC00862A6NCI5 91 aa6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 KRTAP29-1A8MX34 341 aaPredicted RBP6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 C9JQL5 133 aa6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 VCYO14598 125 aa6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 RPS10P46783 165 aaKnown RBP6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 POLR2KP53803 58 aaKnown RBP6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 SUMO2P61956 95 aaKnown RBP6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 SRSF3P84103 164 aaKnown RBP6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 FAM104BQ5XKR9 115 aa6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 CHCHD10Q8WYQ3 142 aaPredicted RBP6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
CLPTM1-211ENST00000589347 SMKR1H3BMG3 65 aa6.85□□□□□ -1.31
CLPTM1-211ENST00000589347 ESDP10768 282 aa6.85□□□□□ -1.31
CLPTM1-211ENST00000589347 CKS2P33552 79 aa6.85□□□□□ -1.31
CLPTM1-211ENST00000589347 PNRC1Q12796 327 aaPredicted RBP6.85□□□□□ -1.31
CLPTM1-211ENST00000589347 SS18Q15532 418 aa6.85□□□□□ -1.31
CLPTM1-211ENST00000589347 MRPL52Q86TS9 123 aaKnown RBP6.85□□□□□ -1.31
CLPTM1-211ENST00000589347 CIRBP-AS1Q8TBR5 109 aa6.85□□□□□ -1.31
CLPTM1-211ENST00000589347 GAS8-AS1O95177 125 aa6.84□□□□□ -1.31
CLPTM1-211ENST00000589347 MRPL51Q4U2R6 128 aaKnown RBP6.84□□□□□ -1.31
CLPTM1-211ENST00000589347 MRPL54Q6P161 138 aaKnown RBP6.84□□□□□ -1.31
CLPTM1-211ENST00000589347 ATP5L2Q7Z4Y8 100 aa6.84□□□□□ -1.31
CLPTM1-211ENST00000589347 NRACQ8N912 160 aa6.84□□□□□ -1.31
CLPTM1-211ENST00000589347 C20orf78Q9BR46 151 aa6.84□□□□□ -1.31
CLPTM1-211ENST00000589347 GVQW2A0A096LPI5 108 aaPredicted RBP6.83□□□□□ -1.32
CLPTM1-211ENST00000589347 CCL25O15444 150 aa6.83□□□□□ -1.32
CLPTM1-211ENST00000589347 XCL1P47992 114 aa6.83□□□□□ -1.32
CLPTM1-211ENST00000589347 C15orf56Q8N910 161 aa6.83□□□□□ -1.32
CLPTM1-211ENST00000589347 PKHD1L1Q86WI1 4243 aa6.83□□□□□ -1.32
CLPTM1-211ENST00000589347 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 LINC00959A0A1B0GUT2 108 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 D6R8Y8 96 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 PHOX2AO14813 284 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 PPBPP02775 128 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 RPL37AP61513 92 aaKnown RBP6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 RPL32P62910 135 aaKnown RBP6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 FOXI1Q12951 378 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 HIGD2BQ4VC39 106 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 ZNF664Q8N3J9 261 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 ANAPC16Q96DE5 110 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 SMIM2Q9BVW6 85 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 CDC42SE2Q9NRR3 84 aa6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 CSDC2Q9Y534 153 aaKnown RBP6.82□□□□□ -1.32
CLPTM1-211ENST00000589347 TRBV24-1A0A075B6N3 115 aa6.81□□□□□ -1.32
CLPTM1-211ENST00000589347 A0A1B0GXF2 115 aa6.81□□□□□ -1.32
CLPTM1-211ENST00000589347 MT-ND4LP03901 98 aa6.81□□□□□ -1.32
CLPTM1-211ENST00000589347 CD164L2Q6UWJ8 174 aa6.81□□□□□ -1.32
CLPTM1-211ENST00000589347 UBE2D4Q9Y2X8 147 aa6.81□□□□□ -1.32
CLPTM1-211ENST00000589347 RNF213Q63HN8 5207 aa6.8□□□□□ -1.32
CLPTM1-211ENST00000589347 C1orf196B1AJZ1 125 aa6.8□□□□□ -1.32
CLPTM1-211ENST00000589347 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
CLPTM1-211ENST00000589347 MALP21145 153 aa6.8□□□□□ -1.32
CLPTM1-211ENST00000589347 SDIM1Q6ZPB5 146 aa6.8□□□□□ -1.32
CLPTM1-211ENST00000589347 ORMDL3Q8N138 153 aa6.8□□□□□ -1.32
CLPTM1-211ENST00000589347 DPH3Q96FX2 82 aa6.8□□□□□ -1.32
CLPTM1-211ENST00000589347 TIMM21Q9BVV7 248 aa6.8□□□□□ -1.32
CLPTM1-211ENST00000589347 PLA2G2DQ9UNK4 145 aa6.8□□□□□ -1.32
CLPTM1-211ENST00000589347 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.8□□□□□ -1.32
CLPTM1-211ENST00000589347 FAT3Q8TDW7 4589 aa6.79□□□□□ -1.32
CLPTM1-211ENST00000589347 ZNF561-AS1K7EIQ3 104 aa6.79□□□□□ -1.32
CLPTM1-211ENST00000589347 CIRBPQ14011 172 aaKnown RBP6.79□□□□□ -1.32
CLPTM1-211ENST00000589347 CLLU1Q5K131 121 aa6.79□□□□□ -1.32
CLPTM1-211ENST00000589347 SPACA4Q8TDM5 124 aa6.79□□□□□ -1.32
CLPTM1-211ENST00000589347 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
CLPTM1-211ENST00000589347 LAMTOR2Q9Y2Q5 125 aa6.79□□□□□ -1.32
CLPTM1-211ENST00000589347 COX7A2LO14548 114 aa6.78□□□□□ -1.32
CLPTM1-211ENST00000589347 ATP6V1G1O75348 118 aa6.78□□□□□ -1.32
CLPTM1-211ENST00000589347 APOMO95445 188 aa6.78□□□□□ -1.32
CLPTM1-211ENST00000589347 NPYP01303 97 aa6.78□□□□□ -1.32
CLPTM1-211ENST00000589347 RAB5AP20339 215 aa6.78□□□□□ -1.32
CLPTM1-211ENST00000589347 Q6ZUT4 128 aa6.78□□□□□ -1.32
CLPTM1-211ENST00000589347 PRELID3AQ96N28 172 aa6.78□□□□□ -1.32
CLPTM1-211ENST00000589347 SPANXA1Q9NS26 97 aa6.78□□□□□ -1.32
CLPTM1-211ENST00000589347 TRAV13-1A0A0B4J241 112 aa6.77□□□□□ -1.33
CLPTM1-211ENST00000589347 IFI27P40305 119 aaPredicted RBP6.77□□□□□ -1.33
CLPTM1-211ENST00000589347 RNASE13Q5GAN3 156 aaKnown RBP6.77□□□□□ -1.33
CLPTM1-211ENST00000589347 UQCC3Q6UW78 93 aa6.77□□□□□ -1.33
CLPTM1-211ENST00000589347 C7orf33Q8WU49 177 aa6.77□□□□□ -1.33
CLPTM1-211ENST00000589347 MAP1LC3AQ9H492 121 aa6.77□□□□□ -1.33
CLPTM1-211ENST00000589347 LINC00474Q9P2X8 69 aa6.77□□□□□ -1.33
CLPTM1-211ENST00000589347 IGKV2-24A0A0C4DH68 120 aa6.76□□□□□ -1.33
CLPTM1-211ENST00000589347 SLPIP03973 132 aa6.76□□□□□ -1.33
CLPTM1-211ENST00000589347 CHTF8P0CG12 524 aa6.76□□□□□ -1.33
CLPTM1-211ENST00000589347 COX6A2Q02221 97 aa6.76□□□□□ -1.33
CLPTM1-211ENST00000589347 MAJINQ3KP22 176 aa6.76□□□□□ -1.33
CLPTM1-211ENST00000589347 TMEM136Q6ZRR5 245 aa6.76□□□□□ -1.33
CLPTM1-211ENST00000589347 LRP2P98164 4655 aa6.76□□□□□ -1.33
CLPTM1-211ENST00000589347 A0A087WYN8 130 aa6.75□□□□□ -1.33
CLPTM1-211ENST00000589347 IFITM10A6NMD0 228 aa6.75□□□□□ -1.33
CLPTM1-211ENST00000589347 PANO1I0J062 215 aa6.75□□□□□ -1.33
CLPTM1-211ENST00000589347 RPL39P62891 51 aaKnown RBP6.75□□□□□ -1.33
CLPTM1-211ENST00000589347 MRPS36P82909 103 aaKnown RBP6.75□□□□□ -1.33
CLPTM1-211ENST00000589347 SYCNQ0VAF6 134 aa6.75□□□□□ -1.33
CLPTM1-211ENST00000589347 PLAC8Q9NZF1 115 aa6.75□□□□□ -1.33
CLPTM1-211ENST00000589347 CAMK2N2Q96S95 79 aa6.74□□□□□ -1.33
CLPTM1-211ENST00000589347 IMMP2LQ96T52 175 aa6.74□□□□□ -1.33
CLPTM1-211ENST00000589347 IGLV4-69A0A075B6H9 119 aa6.73□□□□□ -1.33
CLPTM1-211ENST00000589347 TGIF2-C20orf24A0A0A6YYL0 155 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms