RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 ARPC5O15511 151 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 IFNA1P01562 189 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 EIF5AP63241 154 aaKnown RBP3.53□□□□□ -1.84
LINC01539-202ENST00000589293 PNRC1Q12796 327 aaPredicted RBP3.53□□□□□ -1.84
LINC01539-202ENST00000589293 HIGD2BQ4VC39 106 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 SPINK6Q6UWN8 80 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 TMUB2Q71RG4 321 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 C20orf203Q8NBC4 194 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 OR2D3Q8NGH3 330 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 TMEM101Q96IK0 257 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 PGLYRP4Q96LB8 373 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 LINC01600Q96MT4 127 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 NIT2Q9NQR4 276 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 IGLV4-60A0A075B6I1 120 aa3.52□□□□□ -1.85
LINC01539-202ENST00000589293 FAM231BA6NCW3 169 aa3.52□□□□□ -1.85
LINC01539-202ENST00000589293 M0QY20 66 aa3.52□□□□□ -1.85
LINC01539-202ENST00000589293 APCSP02743 223 aa3.52□□□□□ -1.85
LINC01539-202ENST00000589293 RPL35P42766 123 aaKnown RBP3.52□□□□□ -1.85
LINC01539-202ENST00000589293 GNG4P50150 75 aa3.52□□□□□ -1.85
LINC01539-202ENST00000589293 PRR3P79522 188 aaKnown RBP3.52□□□□□ -1.85
LINC01539-202ENST00000589293 KRTAP26-1Q6PEX3 210 aa3.52□□□□□ -1.85
LINC01539-202ENST00000589293 Q6ZRP5 223 aa3.52□□□□□ -1.85
LINC01539-202ENST00000589293 ISOC2Q96AB3 205 aa3.52□□□□□ -1.85
LINC01539-202ENST00000589293 FAT3Q8TDW7 4589 aa3.52□□□□□ -1.85
LINC01539-202ENST00000589293 A0A0J9YXV3 536 aa3.51□□□□□ -1.85
LINC01539-202ENST00000589293 KANTRA0A1W2PQU2 76 aa3.51□□□□□ -1.85
LINC01539-202ENST00000589293 Q5BKY6 102 aa3.51□□□□□ -1.85
LINC01539-202ENST00000589293 TEX261Q6UWH6 196 aa3.51□□□□□ -1.85
LINC01539-202ENST00000589293 CHCHD10Q8WYQ3 142 aaPredicted RBP3.51□□□□□ -1.85
LINC01539-202ENST00000589293 CARD19Q96LW7 228 aa3.51□□□□□ -1.85
LINC01539-202ENST00000589293 MANBALQ9NQG1 85 aa3.51□□□□□ -1.85
LINC01539-202ENST00000589293 GVQW2A0A096LPI5 108 aaPredicted RBP3.5□□□□□ -1.85
LINC01539-202ENST00000589293 TRAV26-2A0A0B4J265 109 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 IGHV1-58A0A0C4DH39 117 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 H7C423 109 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 NCR2O95944 276 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 ZNF25P17030 456 aaPredicted RBP3.5□□□□□ -1.85
LINC01539-202ENST00000589293 PMCHP20382 165 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 NTF3P20783 257 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 XCL1P47992 114 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 SMAGPQ0VAQ4 97 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 SS18Q15532 418 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 CENPWQ5EE01 88 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 EIF5AL1Q6IS14 154 aaKnown RBP3.5□□□□□ -1.85
LINC01539-202ENST00000589293 LYZL1Q6UWQ5 148 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 C15orf56Q8N910 161 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 OR5A1Q8NGJ0 315 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 MBD3L1Q8WWY6 194 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 BORCS7Q96B45 105 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 SMIM12Q96EX1 92 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 GNG13Q9P2W3 67 aa3.5□□□□□ -1.85
LINC01539-202ENST00000589293 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.49□□□□□ -1.85
LINC01539-202ENST00000589293 A0A096LNI7 61 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 IGKV2-29A2NJV5 120 aaPredicted RBP3.49□□□□□ -1.85
LINC01539-202ENST00000589293 PDE6DO43924 150 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 MT-ND6P03923 174 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 IGLC6P0CF74 106 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 FGF6P10767 208 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 LINC01547P58512 204 aaPredicted RBP3.49□□□□□ -1.85
LINC01539-202ENST00000589293 SYCNQ0VAF6 134 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 GAGE2BQ13066 116 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 GAGE2EQ4V326 116 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 GAGE2AQ6NT46 116 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 GFRA4Q9GZZ7 299 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 MED9Q9NWA0 146 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 GAGE2DQ9UEU5 116 aa3.49□□□□□ -1.85
LINC01539-202ENST00000589293 LOC107984640A0A0U1RRK4 108 aa3.48□□□□□ -1.85
LINC01539-202ENST00000589293 I3L3M4 83 aa3.48□□□□□ -1.85
LINC01539-202ENST00000589293 CCL25O15444 150 aa3.48□□□□□ -1.85
LINC01539-202ENST00000589293 GAS8-AS1O95177 125 aa3.48□□□□□ -1.85
LINC01539-202ENST00000589293 CCL20P78556 96 aa3.48□□□□□ -1.85
LINC01539-202ENST00000589293 ZNF345Q14585 488 aa3.48□□□□□ -1.85
LINC01539-202ENST00000589293 ZNF664Q8N3J9 261 aa3.48□□□□□ -1.85
LINC01539-202ENST00000589293 TSKUQ8WUA8 353 aa3.48□□□□□ -1.85
LINC01539-202ENST00000589293 MRAP2Q96G30 205 aa3.48□□□□□ -1.85
LINC01539-202ENST00000589293 CYTL1Q9NRR1 136 aa3.48□□□□□ -1.85
LINC01539-202ENST00000589293 IGLV5-45A0A087WSX0 123 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 A0A0U1RQV1 116 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 RAB19A4D1S5 217 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 SDHAF1A6NFY7 115 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 BCL2L11O43521 198 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 APOMO95445 188 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 FCER1GP30273 86 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 SNRPEP62304 92 aaKnown RBP3.47□□□□□ -1.85
LINC01539-202ENST00000589293 MEF2BQ02080 365 aaPredicted RBP3.47□□□□□ -1.85
LINC01539-202ENST00000589293 RPL18AQ02543 176 aaKnown RBP3.47□□□□□ -1.85
LINC01539-202ENST00000589293 C9orf62Q8N4C0 152 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 GATD1Q8NB37 220 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 C11orf52Q96A22 123 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 FAM210AQ96ND0 272 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 CAMK2N2Q96S95 79 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 RPP21Q9H633 154 aaKnown RBP3.47□□□□□ -1.85
LINC01539-202ENST00000589293 ST20Q9HBF5 79 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 PKHD1L1Q86WI1 4243 aa3.47□□□□□ -1.85
LINC01539-202ENST00000589293 IGLV4-69A0A075B6H9 119 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 LINC00959A0A1B0GUT2 108 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 C19orf71A6NCJ1 209 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 C1orf196B1AJZ1 125 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 COX7A2LO14548 114 aa3.46□□□□□ -1.86
LINC01539-202ENST00000589293 TSHBP01222 138 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms