RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 C20orf78Q9BR46 151 aa9.94□□□□□ -0.82
ERCC1-209ENST00000589214 RHEBQ15382 184 aa9.93□□□□□ -0.82
ERCC1-209ENST00000589214 TMEM136Q6ZRR5 245 aa9.93□□□□□ -0.82
ERCC1-209ENST00000589214 Q6ZSA8 131 aa9.93□□□□□ -0.82
ERCC1-209ENST00000589214 IMMP2LQ96T52 175 aa9.93□□□□□ -0.82
ERCC1-209ENST00000589214 KIR2DL4Q99706 377 aa9.93□□□□□ -0.82
ERCC1-209ENST00000589214 TRAV8-4A0A0B4J246 113 aa9.92□□□□□ -0.82
ERCC1-209ENST00000589214 C7orf77A4D0Y5 90 aa9.92□□□□□ -0.82
ERCC1-209ENST00000589214 APOC3P02656 99 aa9.92□□□□□ -0.82
ERCC1-209ENST00000589214 ORMDL3Q8N138 153 aa9.92□□□□□ -0.82
ERCC1-209ENST00000589214 TMEM101Q96IK0 257 aa9.92□□□□□ -0.82
ERCC1-209ENST00000589214 PRELID3AQ96N28 172 aa9.92□□□□□ -0.82
ERCC1-209ENST00000589214 PPBPP02775 128 aa9.91□□□□□ -0.82
ERCC1-209ENST00000589214 SVBPQ8N300 66 aa9.91□□□□□ -0.82
ERCC1-209ENST00000589214 OR5A1Q8NGJ0 315 aa9.91□□□□□ -0.82
ERCC1-209ENST00000589214 SMIM2Q9BVW6 85 aa9.91□□□□□ -0.82
ERCC1-209ENST00000589214 LOC389332A0A1B0GUA5 103 aa9.9□□□□□ -0.82
ERCC1-209ENST00000589214 GAGE12HA6NDE8 117 aa9.9□□□□□ -0.82
ERCC1-209ENST00000589214 FAM229AH3BQW9 127 aa9.9□□□□□ -0.82
ERCC1-209ENST00000589214 TCAPO15273 167 aa9.9□□□□□ -0.82
ERCC1-209ENST00000589214 INAFM2P0DMQ5 153 aa9.9□□□□□ -0.82
ERCC1-209ENST00000589214 ZNF25P17030 456 aaPredicted RBP9.9□□□□□ -0.82
ERCC1-209ENST00000589214 PHOX2AO14813 284 aa9.89□□□□□ -0.83
ERCC1-209ENST00000589214 SNAPINO95295 136 aa9.89□□□□□ -0.83
ERCC1-209ENST00000589214 PRSS1P07477 247 aa9.89□□□□□ -0.83
ERCC1-209ENST00000589214 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
ERCC1-209ENST00000589214 DGAT2L7PQ6IED9 249 aa9.89□□□□□ -0.83
ERCC1-209ENST00000589214 MRPL52Q86TS9 123 aaKnown RBP9.89□□□□□ -0.83
ERCC1-209ENST00000589214 RPS10P5Q9NQ39 176 aa9.89□□□□□ -0.83
ERCC1-209ENST00000589214 CDC42SE2Q9NRR3 84 aa9.89□□□□□ -0.83
ERCC1-209ENST00000589214 FAT1Q14517 4588 aa9.89□□□□□ -0.83
ERCC1-209ENST00000589214 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
ERCC1-209ENST00000589214 RNASE13Q5GAN3 156 aaKnown RBP9.88□□□□□ -0.83
ERCC1-209ENST00000589214 SCXQ7RTU7 201 aa9.88□□□□□ -0.83
ERCC1-209ENST00000589214 ZNF664Q8N3J9 261 aa9.88□□□□□ -0.83
ERCC1-209ENST00000589214 CHCHD10Q8WYQ3 142 aaPredicted RBP9.88□□□□□ -0.83
ERCC1-209ENST00000589214 UBE2D4Q9Y2X8 147 aa9.88□□□□□ -0.83
ERCC1-209ENST00000589214 TRAV9-1A0A075B6T8 112 aa9.87□□□□□ -0.83
ERCC1-209ENST00000589214 LINC00959A0A1B0GUT2 108 aa9.87□□□□□ -0.83
ERCC1-209ENST00000589214 KIAA1644Q3SXP7 199 aa9.87□□□□□ -0.83
ERCC1-209ENST00000589214 S100PP25815 95 aa9.86□□□□□ -0.83
ERCC1-209ENST00000589214 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
ERCC1-209ENST00000589214 XCL1P47992 114 aa9.85□□□□□ -0.83
ERCC1-209ENST00000589214 TMEM18Q96B42 140 aa9.85□□□□□ -0.83
ERCC1-209ENST00000589214 MAP1LC3AQ9H492 121 aa9.85□□□□□ -0.83
ERCC1-209ENST00000589214 hDV102S1A0JD36 115 aa9.84□□□□□ -0.83
ERCC1-209ENST00000589214 CCL25O15444 150 aa9.84□□□□□ -0.83
ERCC1-209ENST00000589214 RAB5AP20339 215 aa9.84□□□□□ -0.83
ERCC1-209ENST00000589214 Q6ZUT4 128 aa9.84□□□□□ -0.83
ERCC1-209ENST00000589214 OPRPNQ99935 248 aaPredicted RBP9.84□□□□□ -0.83
ERCC1-209ENST00000589214 CHAC1Q9BUX1 264 aa9.84□□□□□ -0.83
ERCC1-209ENST00000589214 PRSS47A8MTI9 375 aa9.83□□□□□ -0.84
ERCC1-209ENST00000589214 SMAGPQ0VAQ4 97 aa9.83□□□□□ -0.84
ERCC1-209ENST00000589214 FOXI1Q12951 378 aa9.83□□□□□ -0.84
ERCC1-209ENST00000589214 SS18Q15532 418 aa9.83□□□□□ -0.84
ERCC1-209ENST00000589214 C15orf56Q8N910 161 aa9.83□□□□□ -0.84
ERCC1-209ENST00000589214 LAMTOR2Q9Y2Q5 125 aa9.83□□□□□ -0.84
ERCC1-209ENST00000589214 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
ERCC1-209ENST00000589214 HIGD2BQ4VC39 106 aa9.82□□□□□ -0.84
ERCC1-209ENST00000589214 Q8N8P6 123 aa9.82□□□□□ -0.84
ERCC1-209ENST00000589214 CIRBP-AS1Q8TBR5 109 aa9.82□□□□□ -0.84
ERCC1-209ENST00000589214 FAM104AQ969W3 186 aa9.82□□□□□ -0.84
ERCC1-209ENST00000589214 TIMM21Q9BVV7 248 aa9.82□□□□□ -0.84
ERCC1-209ENST00000589214 VPS13BQ7Z7G8 4022 aa9.82□□□□□ -0.84
ERCC1-209ENST00000589214 TRAV13-1A0A0B4J241 112 aa9.81□□□□□ -0.84
ERCC1-209ENST00000589214 SLPIP03973 132 aa9.81□□□□□ -0.84
ERCC1-209ENST00000589214 PLA2G1BP04054 148 aaKnown RBP9.81□□□□□ -0.84
ERCC1-209ENST00000589214 IFI27P40305 119 aaPredicted RBP9.81□□□□□ -0.84
ERCC1-209ENST00000589214 C9orf163Q8N9P6 203 aa9.81□□□□□ -0.84
ERCC1-209ENST00000589214 GNB1LQ9BYB4 327 aa9.81□□□□□ -0.84
ERCC1-209ENST00000589214 TGIF2-C20orf24A0A0A6YYL0 155 aa9.8□□□□□ -0.84
ERCC1-209ENST00000589214 AP5S1Q9NUS5 200 aa9.8□□□□□ -0.84
ERCC1-209ENST00000589214 CNBPP62633 177 aaKnown RBP9.79□□□□□ -0.84
ERCC1-209ENST00000589214 CFAP161Q6P656 301 aa9.79□□□□□ -0.84
ERCC1-209ENST00000589214 CD164L2Q6UWJ8 174 aa9.79□□□□□ -0.84
ERCC1-209ENST00000589214 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
ERCC1-209ENST00000589214 SPANXA1Q9NS26 97 aa9.79□□□□□ -0.84
ERCC1-209ENST00000589214 C1orf196B1AJZ1 125 aa9.78□□□□□ -0.84
ERCC1-209ENST00000589214 FABP9Q0Z7S8 132 aa9.78□□□□□ -0.84
ERCC1-209ENST00000589214 LINC00526Q96FQ7 95 aa9.78□□□□□ -0.84
ERCC1-209ENST00000589214 YPEL4Q96NS1 127 aa9.78□□□□□ -0.84
ERCC1-209ENST00000589214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.78□□□□□ -0.84
ERCC1-209ENST00000589214 SRRM2Q9UQ35 2752 aaKnown RBP9.78□□□□□ -0.84
ERCC1-209ENST00000589214 COX19Q49B96 90 aa9.77□□□□□ -0.85
ERCC1-209ENST00000589214 ALKBH7Q9BT30 221 aaPredicted RBP9.77□□□□□ -0.85
ERCC1-209ENST00000589214 NXT2Q9NPJ8 142 aaKnown RBP9.77□□□□□ -0.85
ERCC1-209ENST00000589214 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
ERCC1-209ENST00000589214 PANO1I0J062 215 aa9.76□□□□□ -0.85
ERCC1-209ENST00000589214 MRPS36P82909 103 aaKnown RBP9.76□□□□□ -0.85
ERCC1-209ENST00000589214 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
ERCC1-209ENST00000589214 ZC2HC1BQ5TFG8 222 aa9.76□□□□□ -0.85
ERCC1-209ENST00000589214 C2orf66Q6UXQ4 117 aa9.76□□□□□ -0.85
ERCC1-209ENST00000589214 C5orf38Q86SI9 138 aa9.76□□□□□ -0.85
ERCC1-209ENST00000589214 SMCO4Q9NRQ5 59 aa9.76□□□□□ -0.85
ERCC1-209ENST00000589214 IGLV4-3A0A075B6K6 122 aa9.75□□□□□ -0.85
ERCC1-209ENST00000589214 IGHV3-64A0A075B6Q5 118 aa9.75□□□□□ -0.85
ERCC1-209ENST00000589214 IGHV1-58A0A0C4DH39 117 aa9.75□□□□□ -0.85
ERCC1-209ENST00000589214 IFITM10A6NMD0 228 aa9.75□□□□□ -0.85
ERCC1-209ENST00000589214 SDIM1Q6ZPB5 146 aa9.75□□□□□ -0.85
ERCC1-209ENST00000589214 CBLN2Q8IUK8 224 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms