RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 SH2D6Q7Z4S9 175 aa8.43□□□□□ -1.06
CCBE1-203ENST00000589116 IGLV4-69A0A075B6H9 119 aa8.42□□□□□ -1.06
CCBE1-203ENST00000589116 A0A0J9YWU9 116 aa8.42□□□□□ -1.06
CCBE1-203ENST00000589116 UBE2L6O14933 153 aa8.42□□□□□ -1.06
CCBE1-203ENST00000589116 FGF6P10767 208 aa8.42□□□□□ -1.06
CCBE1-203ENST00000589116 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
CCBE1-203ENST00000589116 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
CCBE1-203ENST00000589116 OPRPNQ99935 248 aaPredicted RBP8.42□□□□□ -1.06
CCBE1-203ENST00000589116 H3BNG1 76 aa8.41□□□□□ -1.06
CCBE1-203ENST00000589116 HTN3P15516 51 aa8.41□□□□□ -1.06
CCBE1-203ENST00000589116 ZNF25P17030 456 aaPredicted RBP8.41□□□□□ -1.06
CCBE1-203ENST00000589116 MRPL23Q16540 153 aaKnown RBP8.41□□□□□ -1.06
CCBE1-203ENST00000589116 ANKRD39Q53RE8 183 aa8.41□□□□□ -1.06
CCBE1-203ENST00000589116 ZC2HC1BQ5TFG8 222 aa8.41□□□□□ -1.06
CCBE1-203ENST00000589116 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
CCBE1-203ENST00000589116 STPG4Q8N801 248 aa8.41□□□□□ -1.06
CCBE1-203ENST00000589116 C2orf88Q9BSF0 95 aa8.41□□□□□ -1.06
CCBE1-203ENST00000589116 BIRC6Q9NR09 4857 aa8.41□□□□□ -1.06
CCBE1-203ENST00000589116 A0A0J9YY99 117 aa8.4□□□□□ -1.06
CCBE1-203ENST00000589116 CEMP1Q6PRD7 247 aaPredicted RBP8.4□□□□□ -1.06
CCBE1-203ENST00000589116 Q6ZUT4 128 aa8.4□□□□□ -1.06
CCBE1-203ENST00000589116 C14orf144Q96I85 54 aa8.4□□□□□ -1.06
CCBE1-203ENST00000589116 ICOSQ9Y6W8 199 aa8.4□□□□□ -1.06
CCBE1-203ENST00000589116 C11orf86A6NJI1 115 aa8.4□□□□□ -1.07
CCBE1-203ENST00000589116 LINC00587B1AMM8 73 aa8.4□□□□□ -1.07
CCBE1-203ENST00000589116 COX8AP10176 69 aa8.4□□□□□ -1.07
CCBE1-203ENST00000589116 AMMECR1LQ6DCA0 310 aa8.4□□□□□ -1.07
CCBE1-203ENST00000589116 C11orf45Q8TAV5 145 aa8.4□□□□□ -1.07
CCBE1-203ENST00000589116 TMEM101Q96IK0 257 aa8.4□□□□□ -1.07
CCBE1-203ENST00000589116 SLC25A34Q6PIV7 304 aa8.39□□□□□ -1.07
CCBE1-203ENST00000589116 Q6ZTC4 211 aa8.39□□□□□ -1.07
CCBE1-203ENST00000589116 OR5A1Q8NGJ0 315 aa8.39□□□□□ -1.07
CCBE1-203ENST00000589116 WWC2-AS2Q96NR7 200 aa8.39□□□□□ -1.07
CCBE1-203ENST00000589116 TENM3Q9P273 2699 aa8.38□□□□□ -1.07
CCBE1-203ENST00000589116 CHCHD5Q9BSY4 110 aa8.38□□□□□ -1.07
CCBE1-203ENST00000589116 CHAC1Q9BUX1 264 aa8.38□□□□□ -1.07
CCBE1-203ENST00000589116 DLEU1O43261 78 aa8.37□□□□□ -1.07
CCBE1-203ENST00000589116 HERVK_113P61574 105 aa8.37□□□□□ -1.07
CCBE1-203ENST00000589116 CDC42SE2Q9NRR3 84 aa8.37□□□□□ -1.07
CCBE1-203ENST00000589116 NMUP48645 174 aa8.37□□□□□ -1.07
CCBE1-203ENST00000589116 HNRNPA3P51991 378 aaKnown RBP8.37□□□□□ -1.07
CCBE1-203ENST00000589116 A0A096LPF7 62 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 TINCRA0A1B0GVN0 87 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 E9PLD3 99 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 UBE2D1P51668 147 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
CCBE1-203ENST00000589116 SEC11AP67812 179 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 GAGE6Q13070 117 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 RNASE13Q5GAN3 156 aaKnown RBP8.36□□□□□ -1.07
CCBE1-203ENST00000589116 TMEM170BQ5T4T1 132 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 B9D2Q9BPU9 175 aa8.36□□□□□ -1.07
CCBE1-203ENST00000589116 EPPK1P58107 5090 aaKnown RBP8.35□□□□□ -1.07
CCBE1-203ENST00000589116 IGKV2D-26A0A0A0MRZ7 120 aa8.35□□□□□ -1.07
CCBE1-203ENST00000589116 A0A1B0GUV1 79 aa8.35□□□□□ -1.07
CCBE1-203ENST00000589116 ZNF22P17026 224 aaPredicted RBP8.35□□□□□ -1.07
CCBE1-203ENST00000589116 TIRAPP58753 221 aa8.35□□□□□ -1.07
CCBE1-203ENST00000589116 MRPS16Q9Y3D3 137 aaKnown RBP8.35□□□□□ -1.07
CCBE1-203ENST00000589116 DEFB131BA0A096LNP1 70 aa8.34□□□□□ -1.07
CCBE1-203ENST00000589116 LELP1Q5T871 98 aa8.34□□□□□ -1.07
CCBE1-203ENST00000589116 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.08
CCBE1-203ENST00000589116 TCTAP57738 103 aa8.34□□□□□ -1.08
CCBE1-203ENST00000589116 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
CCBE1-203ENST00000589116 TMEM223A0PJW6 202 aa8.33□□□□□ -1.08
CCBE1-203ENST00000589116 SIVA1O15304 175 aa8.33□□□□□ -1.08
CCBE1-203ENST00000589116 HERVK_113P63121 156 aa8.33□□□□□ -1.08
CCBE1-203ENST00000589116 PCP2Q8IVA1 136 aa8.33□□□□□ -1.08
CCBE1-203ENST00000589116 GEMIN7Q9H840 131 aaKnown RBP8.33□□□□□ -1.08
CCBE1-203ENST00000589116 IGLV4-60A0A075B6I1 120 aa8.31□□□□□ -1.08
CCBE1-203ENST00000589116 TRAV8-6A0A0B4J262 113 aa8.31□□□□□ -1.08
CCBE1-203ENST00000589116 RBX1P62877 108 aa8.31□□□□□ -1.08
CCBE1-203ENST00000589116 CTAG1AP78358 180 aa8.31□□□□□ -1.08
CCBE1-203ENST00000589116 MPV17L2Q567V2 206 aa8.31□□□□□ -1.08
CCBE1-203ENST00000589116 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
CCBE1-203ENST00000589116 TP73-AS1Q9UF72 201 aa8.31□□□□□ -1.08
CCBE1-203ENST00000589116 TRAV13-1A0A0B4J241 112 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 TMEM262E9PQX1 116 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 H3BRM9 83 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 LYPD5Q6UWN5 251 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 C2orf91Q6ZV80 131 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 M0R143 59 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 LEPROTO15243 131 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 NHLRC4P0CG21 123 aaPredicted RBP8.3□□□□□ -1.08
CCBE1-203ENST00000589116 C15orf53Q8NAA6 179 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 PLEKHB2Q96CS7 222 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 HIGD1BQ9P298 99 aa8.3□□□□□ -1.08
CCBE1-203ENST00000589116 MYMXA0A1B0GTQ4 84 aa8.29□□□□□ -1.08
CCBE1-203ENST00000589116 TTTY13Q9BZ97 58 aa8.29□□□□□ -1.08
CCBE1-203ENST00000589116 IGHV1-58A0A0C4DH39 117 aa8.28□□□□□ -1.08
CCBE1-203ENST00000589116 J3QQQ9 107 aa8.28□□□□□ -1.08
CCBE1-203ENST00000589116 CCL25O15444 150 aa8.28□□□□□ -1.08
CCBE1-203ENST00000589116 CDKN2A-AS1Q9UH64 79 aa8.28□□□□□ -1.08
CCBE1-203ENST00000589116 COL7A1Q02388 2944 aa8.28□□□□□ -1.08
CCBE1-203ENST00000589116 LGALS3P17931 250 aaKnown RBP8.27□□□□□ -1.08
CCBE1-203ENST00000589116 LBHQ53QV2 105 aaPredicted RBP8.27□□□□□ -1.08
CCBE1-203ENST00000589116 MAPKAPK5-AS1Q8N8E1 139 aa8.27□□□□□ -1.08
CCBE1-203ENST00000589116 ZNF815PA8K554 130 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms