RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 CSMD3Q7Z407 3707 aa9.72□□□□□ -0.85
GFAP-215ENST00000588957 ATP5LO75964 103 aa9.72□□□□□ -0.85
GFAP-215ENST00000588957 Q8N976 141 aa9.72□□□□□ -0.85
GFAP-215ENST00000588957 SCGB3A1Q96QR1 104 aa9.72□□□□□ -0.85
GFAP-215ENST00000588957 TIMM17AQ99595 171 aa9.72□□□□□ -0.85
GFAP-215ENST00000588957 CDC42SE2Q9NRR3 84 aa9.72□□□□□ -0.85
GFAP-215ENST00000588957 REG3AQ06141 175 aa9.71□□□□□ -0.86
GFAP-215ENST00000588957 C1orf134Q5TEV5 83 aa9.71□□□□□ -0.86
GFAP-215ENST00000588957 Q6ZR54 194 aa9.71□□□□□ -0.86
GFAP-215ENST00000588957 UBE2WQ96B02 151 aa9.71□□□□□ -0.86
GFAP-215ENST00000588957 PRR34Q9NV39 138 aa9.71□□□□□ -0.86
GFAP-215ENST00000588957 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.7□□□□□ -0.86
GFAP-215ENST00000588957 M0R2N4 97 aa9.7□□□□□ -0.86
GFAP-215ENST00000588957 RPL39P62891 51 aaKnown RBP9.7□□□□□ -0.86
GFAP-215ENST00000588957 LINC00269Q8N2A0 174 aa9.7□□□□□ -0.86
GFAP-215ENST00000588957 C6orf223Q8N319 242 aa9.7□□□□□ -0.86
GFAP-215ENST00000588957 C2orf88Q9BSF0 95 aa9.7□□□□□ -0.86
GFAP-215ENST00000588957 VCX2Q9H322 139 aa9.7□□□□□ -0.86
GFAP-215ENST00000588957 IGLV4-60A0A075B6I1 120 aa9.69□□□□□ -0.86
GFAP-215ENST00000588957 IGIPA6NJ69 53 aa9.69□□□□□ -0.86
GFAP-215ENST00000588957 S100A6P06703 90 aa9.69□□□□□ -0.86
GFAP-215ENST00000588957 SS18Q15532 418 aa9.69□□□□□ -0.86
GFAP-215ENST00000588957 COA6Q5JTJ3 125 aaKnown RBP9.69□□□□□ -0.86
GFAP-215ENST00000588957 TEX43Q6ZNM6 134 aa9.69□□□□□ -0.86
GFAP-215ENST00000588957 C1orf43Q9BWL3 253 aa9.69□□□□□ -0.86
GFAP-215ENST00000588957 STARD9Q9P2P6 4700 aa9.69□□□□□ -0.86
GFAP-215ENST00000588957 DYNC2H1Q8NCM8 4307 aaKnown RBP9.68□□□□□ -0.86
GFAP-215ENST00000588957 SERF1AO75920 110 aa9.68□□□□□ -0.86
GFAP-215ENST00000588957 SEC11AP67812 179 aa9.68□□□□□ -0.86
GFAP-215ENST00000588957 URB1-AS1Q96HZ7 61 aa9.68□□□□□ -0.86
GFAP-215ENST00000588957 HSPB8Q9UJY1 196 aa9.68□□□□□ -0.86
GFAP-215ENST00000588957 PACRGQ96M98 296 aaPredicted RBP9.67□□□□□ -0.86
GFAP-215ENST00000588957 RYR3Q15413 4870 aa9.66□□□□□ -0.86
GFAP-215ENST00000588957 PSCAO43653 123 aa9.66□□□□□ -0.86
GFAP-215ENST00000588957 NDUFA6P56556 154 aa9.66□□□□□ -0.86
GFAP-215ENST00000588957 ENHOQ6UWT2 76 aa9.66□□□□□ -0.86
GFAP-215ENST00000588957 IGLV4-3A0A075B6K6 122 aa9.65□□□□□ -0.86
GFAP-215ENST00000588957 LEPROTL1O95214 131 aa9.65□□□□□ -0.86
GFAP-215ENST00000588957 PDZD11Q5EBL8 140 aa9.65□□□□□ -0.86
GFAP-215ENST00000588957 Q8N3U1 123 aa9.65□□□□□ -0.86
GFAP-215ENST00000588957 Q9HAA7 133 aa9.65□□□□□ -0.86
GFAP-215ENST00000588957 SACSQ9NZJ4 4579 aa9.65□□□□□ -0.86
GFAP-215ENST00000588957 IGKV2D-24A0A075B6R9 120 aa9.64□□□□□ -0.87
GFAP-215ENST00000588957 IFITM10A6NMD0 228 aa9.64□□□□□ -0.87
GFAP-215ENST00000588957 Q6ZUT4 128 aa9.64□□□□□ -0.87
GFAP-215ENST00000588957 KRTAP1-5Q9BYS1 174 aa9.64□□□□□ -0.87
GFAP-215ENST00000588957 IGKV3OR2-268A0A0C4DH90 116 aa9.63□□□□□ -0.87
GFAP-215ENST00000588957 LINC00959A0A1B0GUT2 108 aa9.63□□□□□ -0.87
GFAP-215ENST00000588957 PRSS1P07477 247 aa9.63□□□□□ -0.87
GFAP-215ENST00000588957 PMVKQ15126 192 aa9.63□□□□□ -0.87
GFAP-215ENST00000588957 LINC00336Q6ZUF6 198 aa9.63□□□□□ -0.87
GFAP-215ENST00000588957 FAM19A2Q8N3H0 131 aa9.63□□□□□ -0.87
GFAP-215ENST00000588957 IFI27L1Q96BM0 104 aa9.63□□□□□ -0.87
GFAP-215ENST00000588957 AMELXQ99217 191 aa9.63□□□□□ -0.87
GFAP-215ENST00000588957 A0A096LNJ9 63 aa9.62□□□□□ -0.87
GFAP-215ENST00000588957 TRAV13-1A0A0B4J241 112 aa9.62□□□□□ -0.87
GFAP-215ENST00000588957 EREGO14944 169 aa9.62□□□□□ -0.87
GFAP-215ENST00000588957 PMCHL1Q16048 86 aa9.62□□□□□ -0.87
GFAP-215ENST00000588957 CLPSL2Q6UWE3 100 aa9.62□□□□□ -0.87
GFAP-215ENST00000588957 S100A2P29034 98 aa9.61□□□□□ -0.87
GFAP-215ENST00000588957 CFAP161Q6P656 301 aa9.61□□□□□ -0.87
GFAP-215ENST00000588957 CD164L2Q6UWJ8 174 aa9.61□□□□□ -0.87
GFAP-215ENST00000588957 CHCHD10Q8WYQ3 142 aaPredicted RBP9.61□□□□□ -0.87
GFAP-215ENST00000588957 OPRPNQ99935 248 aaPredicted RBP9.61□□□□□ -0.87
GFAP-215ENST00000588957 PLECQ15149 4684 aaKnown RBP9.61□□□□□ -0.87
GFAP-215ENST00000588957 LINC00310P59036 64 aa9.6□□□□□ -0.87
GFAP-215ENST00000588957 C14orf177Q52M58 125 aa9.6□□□□□ -0.87
GFAP-215ENST00000588957 BAALCQ8WXS3 180 aa9.6□□□□□ -0.87
GFAP-215ENST00000588957 MAP1LC3CQ9BXW4 147 aa9.6□□□□□ -0.87
GFAP-215ENST00000588957 CST9LQ9H4G1 147 aa9.6□□□□□ -0.87
GFAP-215ENST00000588957 TRAV12-1A0A0B4J245 112 aa9.59□□□□□ -0.87
GFAP-215ENST00000588957 NUPR1O60356 82 aa9.59□□□□□ -0.87
GFAP-215ENST00000588957 HERVK_113P63121 156 aa9.59□□□□□ -0.87
GFAP-215ENST00000588957 GEMIN7Q9H840 131 aaKnown RBP9.59□□□□□ -0.87
GFAP-215ENST00000588957 RYR2Q92736 4967 aa9.58□□□□□ -0.88
GFAP-215ENST00000588957 IGLV10-54A0A075B6I4 117 aa9.58□□□□□ -0.88
GFAP-215ENST00000588957 APOMO95445 188 aa9.58□□□□□ -0.88
GFAP-215ENST00000588957 FABP4P15090 132 aa9.58□□□□□ -0.88
GFAP-215ENST00000588957 XCL1P47992 114 aa9.58□□□□□ -0.88
GFAP-215ENST00000588957 UBE2D1P51668 147 aa9.58□□□□□ -0.88
GFAP-215ENST00000588957 AKR1D1P51857 326 aa9.58□□□□□ -0.88
GFAP-215ENST00000588957 RNASE13Q5GAN3 156 aaKnown RBP9.58□□□□□ -0.88
GFAP-215ENST00000588957 FAM19A3Q7Z5A8 133 aa9.58□□□□□ -0.88
GFAP-215ENST00000588957 FAM104AQ969W3 186 aa9.58□□□□□ -0.88
GFAP-215ENST00000588957 PRSS29PA6NIE9 313 aa9.57□□□□□ -0.88
GFAP-215ENST00000588957 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
GFAP-215ENST00000588957 GAGE12HA6NDE8 117 aa9.56□□□□□ -0.88
GFAP-215ENST00000588957 COX7A2LO14548 114 aa9.56□□□□□ -0.88
GFAP-215ENST00000588957 MALP21145 153 aa9.56□□□□□ -0.88
GFAP-215ENST00000588957 Q6ZRN7 208 aaPredicted RBP9.56□□□□□ -0.88
GFAP-215ENST00000588957 LINC00173Q6ZV60 143 aa9.56□□□□□ -0.88
GFAP-215ENST00000588957 LINC01561Q8N1V8 128 aa9.56□□□□□ -0.88
GFAP-215ENST00000588957 DNAH1Q9P2D7 4330 aa9.56□□□□□ -0.88
GFAP-215ENST00000588957 LYSTQ99698 3801 aa9.55□□□□□ -0.88
GFAP-215ENST00000588957 H3BRM9 83 aa9.55□□□□□ -0.88
GFAP-215ENST00000588957 LINC00242Q5T6M2 205 aa9.55□□□□□ -0.88
GFAP-215ENST00000588957 IGHV3OR16-9A0A0B4J2B5 98 aa9.54□□□□□ -0.88
GFAP-215ENST00000588957 SPATA12Q7Z6I5 190 aa9.54□□□□□ -0.88
GFAP-215ENST00000588957 CHTOPQ9Y3Y2 248 aaKnown RBP9.54□□□□□ -0.88
GFAP-215ENST00000588957 ALMS1Q8TCU4 4167 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms