RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 ATP5L2Q7Z4Y8 100 aa13.18□□□□□ -0.3
VAT1-203ENST00000587062 C9orf163Q8N9P6 203 aa13.18□□□□□ -0.3
VAT1-203ENST00000587062 CHCHD10Q8WYQ3 142 aaPredicted RBP13.18□□□□□ -0.3
VAT1-203ENST00000587062 CHAC1Q9BUX1 264 aa13.18□□□□□ -0.3
VAT1-203ENST00000587062 APOBP04114 4563 aaKnown RBP13.18□□□□□ -0.3
VAT1-203ENST00000587062 CLLU1Q5K131 121 aa13.17□□□□□ -0.3
VAT1-203ENST00000587062 MRPL52Q86TS9 123 aaKnown RBP13.17□□□□□ -0.3
VAT1-203ENST00000587062 NRACQ8N912 160 aa13.17□□□□□ -0.3
VAT1-203ENST00000587062 PCLOQ9Y6V0 5065 aa13.16□□□□□ -0.3
VAT1-203ENST00000587062 TRBV24-1A0A075B6N3 115 aa13.15□□□□□ -0.3
VAT1-203ENST00000587062 CNBPP62633 177 aaKnown RBP13.15□□□□□ -0.3
VAT1-203ENST00000587062 PHOX2AO14813 284 aa13.14□□□□□ -0.31
VAT1-203ENST00000587062 RPL32P62910 135 aaKnown RBP13.14□□□□□ -0.31
VAT1-203ENST00000587062 SCXQ7RTU7 201 aa13.14□□□□□ -0.31
VAT1-203ENST00000587062 ZNF664Q8N3J9 261 aa13.14□□□□□ -0.31
VAT1-203ENST00000587062 CSDC2Q9Y534 153 aaKnown RBP13.14□□□□□ -0.31
VAT1-203ENST00000587062 IGHV3-64A0A075B6Q5 118 aa13.13□□□□□ -0.31
VAT1-203ENST00000587062 A0A1B0GXF2 115 aa13.13□□□□□ -0.31
VAT1-203ENST00000587062 CCL25O15444 150 aa13.13□□□□□ -0.31
VAT1-203ENST00000587062 TNFRSF6BO95407 300 aa13.13□□□□□ -0.31
VAT1-203ENST00000587062 LINC00528Q8N1L1 170 aa13.13□□□□□ -0.31
VAT1-203ENST00000587062 CDC42SE2Q9NRR3 84 aa13.13□□□□□ -0.31
VAT1-203ENST00000587062 LINC00959A0A1B0GUT2 108 aa13.12□□□□□ -0.31
VAT1-203ENST00000587062 D6R8Y8 96 aa13.12□□□□□ -0.31
VAT1-203ENST00000587062 UQCC3Q6UW78 93 aa13.12□□□□□ -0.31
VAT1-203ENST00000587062 XCL1P47992 114 aa13.11□□□□□ -0.31
VAT1-203ENST00000587062 ORMDL3Q8N138 153 aa13.11□□□□□ -0.31
VAT1-203ENST00000587062 CIRBP-AS1Q8TBR5 109 aa13.11□□□□□ -0.31
VAT1-203ENST00000587062 DPH3Q96FX2 82 aa13.11□□□□□ -0.31
VAT1-203ENST00000587062 C1orf196B1AJZ1 125 aa13.1□□□□□ -0.31
VAT1-203ENST00000587062 RAB5AP20339 215 aa13.1□□□□□ -0.31
VAT1-203ENST00000587062 TMEM136Q6ZRR5 245 aa13.09□□□□□ -0.31
VAT1-203ENST00000587062 TIMM21Q9BVV7 248 aa13.09□□□□□ -0.31
VAT1-203ENST00000587062 SMIM2Q9BVW6 85 aa13.09□□□□□ -0.31
VAT1-203ENST00000587062 PKIGQ9Y2B9 76 aa13.09□□□□□ -0.31
VAT1-203ENST00000587062 IGHV1-58A0A0C4DH39 117 aa13.08□□□□□ -0.32
VAT1-203ENST00000587062 FOXI1Q12951 378 aa13.08□□□□□ -0.32
VAT1-203ENST00000587062 CD164L2Q6UWJ8 174 aa13.08□□□□□ -0.32
VAT1-203ENST00000587062 SDIM1Q6ZPB5 146 aa13.08□□□□□ -0.32
VAT1-203ENST00000587062 LAMTOR2Q9Y2Q5 125 aa13.08□□□□□ -0.32
VAT1-203ENST00000587062 UBE2D4Q9Y2X8 147 aa13.08□□□□□ -0.32
VAT1-203ENST00000587062 C15orf56Q8N910 161 aa13.07□□□□□ -0.32
VAT1-203ENST00000587062 PRELID3AQ96N28 172 aa13.07□□□□□ -0.32
VAT1-203ENST00000587062 MALP21145 153 aa13.06□□□□□ -0.32
VAT1-203ENST00000587062 HIGD2BQ4VC39 106 aa13.06□□□□□ -0.32
VAT1-203ENST00000587062 GVQW2A0A096LPI5 108 aaPredicted RBP13.05□□□□□ -0.32
VAT1-203ENST00000587062 ZNF561-AS1K7EIQ3 104 aa13.05□□□□□ -0.32
VAT1-203ENST00000587062 NPYP01303 97 aa13.05□□□□□ -0.32
VAT1-203ENST00000587062 IMMP2LQ96T52 175 aa13.05□□□□□ -0.32
VAT1-203ENST00000587062 ABCA13Q86UQ4 5058 aa13.05□□□□□ -0.32
VAT1-203ENST00000587062 SPANXA1Q9NS26 97 aa13.04□□□□□ -0.32
VAT1-203ENST00000587062 CTDSP1Q9GZU7 261 aa13.03□□□□□ -0.32
VAT1-203ENST00000587062 MAP1LC3AQ9H492 121 aa13.03□□□□□ -0.32
VAT1-203ENST00000587062 TRAV13-1A0A0B4J241 112 aa13.02□□□□□ -0.33
VAT1-203ENST00000587062 TMEM218A2RU14 115 aa13.02□□□□□ -0.33
VAT1-203ENST00000587062 COX7A2LO14548 114 aa13.02□□□□□ -0.33
VAT1-203ENST00000587062 APOMO95445 188 aa13.01□□□□□ -0.33
VAT1-203ENST00000587062 SLPIP03973 132 aa13.01□□□□□ -0.33
VAT1-203ENST00000587062 PRSS47A8MTI9 375 aa13□□□□□ -0.33
VAT1-203ENST00000587062 S100PP25815 95 aa13□□□□□ -0.33
VAT1-203ENST00000587062 IFI27P40305 119 aaPredicted RBP13□□□□□ -0.33
VAT1-203ENST00000587062 IFITM2Q01629 132 aa13□□□□□ -0.33
VAT1-203ENST00000587062 SEC11CQ9BY50 192 aa13□□□□□ -0.33
VAT1-203ENST00000587062 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13□□□□□ -0.33
VAT1-203ENST00000587062 RPL39P62891 51 aaKnown RBP12.99□□□□□ -0.33
VAT1-203ENST00000587062 RNASE13Q5GAN3 156 aaKnown RBP12.99□□□□□ -0.33
VAT1-203ENST00000587062 Q6ZUT4 128 aa12.99□□□□□ -0.33
VAT1-203ENST00000587062 TRAV9-1A0A075B6T8 112 aa12.98□□□□□ -0.33
VAT1-203ENST00000587062 MRPS36P82909 103 aaKnown RBP12.98□□□□□ -0.33
VAT1-203ENST00000587062 COX6A2Q02221 97 aa12.98□□□□□ -0.33
VAT1-203ENST00000587062 LINC00474Q9P2X8 69 aa12.98□□□□□ -0.33
VAT1-203ENST00000587062 LOC389332A0A1B0GUA5 103 aa12.97□□□□□ -0.33
VAT1-203ENST00000587062 K7EMI3 77 aa12.97□□□□□ -0.33
VAT1-203ENST00000587062 G0S2P27469 103 aa12.97□□□□□ -0.33
VAT1-203ENST00000587062 RPL37AP61513 92 aaKnown RBP12.97□□□□□ -0.33
VAT1-203ENST00000587062 CIRBPQ14011 172 aaKnown RBP12.97□□□□□ -0.33
VAT1-203ENST00000587062 CARD19Q96LW7 228 aa12.97□□□□□ -0.33
VAT1-203ENST00000587062 SYCNQ0VAF6 134 aa12.95□□□□□ -0.34
VAT1-203ENST00000587062 ORMDL2Q53FV1 153 aa12.95□□□□□ -0.34
VAT1-203ENST00000587062 COMMD7Q86VX2 200 aa12.95□□□□□ -0.34
VAT1-203ENST00000587062 Q8N8P6 123 aa12.95□□□□□ -0.34
VAT1-203ENST00000587062 NXT2Q9NPJ8 142 aaKnown RBP12.95□□□□□ -0.34
VAT1-203ENST00000587062 PYGO1Q9Y3Y4 419 aa12.95□□□□□ -0.34
VAT1-203ENST00000587062 IFITM10A6NMD0 228 aa12.94□□□□□ -0.34
VAT1-203ENST00000587062 SPACA4Q8TDM5 124 aa12.94□□□□□ -0.34
VAT1-203ENST00000587062 A0A087WYN8 130 aa12.93□□□□□ -0.34
VAT1-203ENST00000587062 ADCYAP1P18509 176 aa12.93□□□□□ -0.34
VAT1-203ENST00000587062 MAJINQ3KP22 176 aa12.93□□□□□ -0.34
VAT1-203ENST00000587062 COX19Q49B96 90 aa12.93□□□□□ -0.34
VAT1-203ENST00000587062 Q6ZN92 141 aa12.93□□□□□ -0.34
VAT1-203ENST00000587062 C5orf38Q86SI9 138 aa12.93□□□□□ -0.34
VAT1-203ENST00000587062 PRSS3P2Q8NHM4 247 aa12.93□□□□□ -0.34
VAT1-203ENST00000587062 CYSLTR1Q9Y271 337 aa12.93□□□□□ -0.34
VAT1-203ENST00000587062 IGKV2-24A0A0C4DH68 120 aa12.92□□□□□ -0.34
VAT1-203ENST00000587062 PANO1I0J062 215 aa12.92□□□□□ -0.34
VAT1-203ENST00000587062 J3QL48 77 aa12.92□□□□□ -0.34
VAT1-203ENST00000587062 C7orf33Q8WU49 177 aa12.92□□□□□ -0.34
VAT1-203ENST00000587062 CAMK2N2Q96S95 79 aa12.92□□□□□ -0.34
VAT1-203ENST00000587062 IGLV4-69A0A075B6H9 119 aa12.91□□□□□ -0.34
VAT1-203ENST00000587062 TGIF2-C20orf24A0A0A6YYL0 155 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms