RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 A0A1B0GUV1 79 aa5.38□□□□□ -1.55
SMAD4-204ENST00000586253 UBE2L6O14933 153 aa5.38□□□□□ -1.55
SMAD4-204ENST00000586253 TCAPO15273 167 aa5.38□□□□□ -1.55
SMAD4-204ENST00000586253 PMCHP20382 165 aa5.38□□□□□ -1.55
SMAD4-204ENST00000586253 MPV17L2Q567V2 206 aa5.38□□□□□ -1.55
SMAD4-204ENST00000586253 TMEM136Q6ZRR5 245 aa5.38□□□□□ -1.55
SMAD4-204ENST00000586253 KIR2DL4Q99706 377 aa5.38□□□□□ -1.55
SMAD4-204ENST00000586253 DNAH10Q8IVF4 4471 aa5.38□□□□□ -1.55
SMAD4-204ENST00000586253 HECTD4Q9Y4D8 3996 aa5.38□□□□□ -1.55
SMAD4-204ENST00000586253 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 TSHBP01222 138 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 HLA-DQA1P01909 254 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 ESDP10768 282 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 RBX1P62877 108 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 Q0VG73 95 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 GAGE6Q13070 117 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 ATRAIDQ6UW56 229 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 SLC7A5P1Q8MH63 180 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 RMI2Q96E14 147 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 SMIM2Q9BVW6 85 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 TM2D2Q9BX73 214 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 GNB1LQ9BYB4 327 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 KLK12Q9UKR0 248 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 COX11Q9Y6N1 276 aa5.37□□□□□ -1.55
SMAD4-204ENST00000586253 A0A1B0GVY2 172 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 NPYP01303 97 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 CRPP02741 224 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 MT-ND6P03923 174 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 ANGP03950 147 aaKnown RBP5.36□□□□□ -1.55
SMAD4-204ENST00000586253 ZNF25P17030 456 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-204ENST00000586253 FCER1GP30273 86 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 Q8N976 141 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 UBE2WQ96B02 151 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 PRELID3AQ96N28 172 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 Q9HAA7 133 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 PRR34Q9NV39 138 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 DNAH17Q9UFH2 4485 aa5.36□□□□□ -1.55
SMAD4-204ENST00000586253 GAGE10A6NGK3 116 aa5.35□□□□□ -1.55
SMAD4-204ENST00000586253 SMAGPQ0VAQ4 97 aa5.35□□□□□ -1.55
SMAD4-204ENST00000586253 MIAQ16674 131 aa5.35□□□□□ -1.55
SMAD4-204ENST00000586253 C20orf203Q8NBC4 194 aa5.35□□□□□ -1.55
SMAD4-204ENST00000586253 DEFB104AQ8WTQ1 72 aa5.35□□□□□ -1.55
SMAD4-204ENST00000586253 IGLV4-60A0A075B6I1 120 aa5.34□□□□□ -1.55
SMAD4-204ENST00000586253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-204ENST00000586253 IGKV2-29A2NJV5 120 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-204ENST00000586253 PSCAO43653 123 aa5.34□□□□□ -1.55
SMAD4-204ENST00000586253 FGF6P10767 208 aa5.34□□□□□ -1.55
SMAD4-204ENST00000586253 REG3AQ06141 175 aa5.34□□□□□ -1.55
SMAD4-204ENST00000586253 AMMECR1LQ6DCA0 310 aa5.34□□□□□ -1.55
SMAD4-204ENST00000586253 ENHOQ6UWT2 76 aa5.34□□□□□ -1.55
SMAD4-204ENST00000586253 MRPL52Q86TS9 123 aaKnown RBP5.34□□□□□ -1.55
SMAD4-204ENST00000586253 LINC00269Q8N2A0 174 aa5.34□□□□□ -1.55
SMAD4-204ENST00000586253 TMEM18Q96B42 140 aa5.34□□□□□ -1.55
SMAD4-204ENST00000586253 MAP1LC3AQ9H492 121 aa5.34□□□□□ -1.55
SMAD4-204ENST00000586253 CSDC2Q9Y534 153 aaKnown RBP5.34□□□□□ -1.55
SMAD4-204ENST00000586253 IGKV2D-24A0A075B6R9 120 aa5.33□□□□□ -1.56
SMAD4-204ENST00000586253 A0A087WTM6 91 aa5.33□□□□□ -1.56
SMAD4-204ENST00000586253 TRAV8-4A0A0B4J246 113 aa5.33□□□□□ -1.56
SMAD4-204ENST00000586253 K7EMI3 77 aa5.33□□□□□ -1.56
SMAD4-204ENST00000586253 RAB5AP20339 215 aa5.33□□□□□ -1.56
SMAD4-204ENST00000586253 RNASEKQ6P5S7 137 aaKnown RBP5.33□□□□□ -1.56
SMAD4-204ENST00000586253 Q8N8P6 123 aa5.33□□□□□ -1.56
SMAD4-204ENST00000586253 TMEM101Q96IK0 257 aa5.33□□□□□ -1.56
SMAD4-204ENST00000586253 YPEL4Q96NS1 127 aa5.33□□□□□ -1.56
SMAD4-204ENST00000586253 SMCO4Q9NRQ5 59 aa5.33□□□□□ -1.56
SMAD4-204ENST00000586253 TGIF2-C20orf24A0A0A6YYL0 155 aa5.32□□□□□ -1.56
SMAD4-204ENST00000586253 LRCOL1A6NCL2 159 aa5.32□□□□□ -1.56
SMAD4-204ENST00000586253 OR5A1Q8NGJ0 315 aa5.32□□□□□ -1.56
SMAD4-204ENST00000586253 TIMM21Q9BVV7 248 aa5.32□□□□□ -1.56
SMAD4-204ENST00000586253 NXT2Q9NPJ8 142 aaKnown RBP5.32□□□□□ -1.56
SMAD4-204ENST00000586253 UBE2D4Q9Y2X8 147 aa5.32□□□□□ -1.56
SMAD4-204ENST00000586253 PKD1P98161 4303 aa5.32□□□□□ -1.56
SMAD4-204ENST00000586253 LOC389332A0A1B0GUA5 103 aa5.31□□□□□ -1.56
SMAD4-204ENST00000586253 NPSP0C0P6 89 aa5.31□□□□□ -1.56
SMAD4-204ENST00000586253 FABP9Q0Z7S8 132 aa5.31□□□□□ -1.56
SMAD4-204ENST00000586253 KIAA1644Q3SXP7 199 aa5.31□□□□□ -1.56
SMAD4-204ENST00000586253 ORMDL2Q53FV1 153 aa5.31□□□□□ -1.56
SMAD4-204ENST00000586253 CLPSL2Q6UWE3 100 aa5.31□□□□□ -1.56
SMAD4-204ENST00000586253 ZNF664Q8N3J9 261 aa5.31□□□□□ -1.56
SMAD4-204ENST00000586253 ALKBH7Q9BT30 221 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-204ENST00000586253 CDC42SE2Q9NRR3 84 aa5.31□□□□□ -1.56
SMAD4-204ENST00000586253 SPANXA1Q9NS26 97 aa5.31□□□□□ -1.56
SMAD4-204ENST00000586253 TRAPPC1Q9Y5R8 145 aa5.31□□□□□ -1.56
SMAD4-204ENST00000586253 PKHD1P08F94 4074 aa5.3□□□□□ -1.56
SMAD4-204ENST00000586253 G0S2P27469 103 aa5.3□□□□□ -1.56
SMAD4-204ENST00000586253 IFI27P40305 119 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-204ENST00000586253 SPATA12Q7Z6I5 190 aa5.3□□□□□ -1.56
SMAD4-204ENST00000586253 CBLN2Q8IUK8 224 aa5.3□□□□□ -1.56
SMAD4-204ENST00000586253 MAPKAPK5-AS1Q8N8E1 139 aa5.3□□□□□ -1.56
SMAD4-204ENST00000586253 NTN5Q8WTR8 489 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-204ENST00000586253 PYGO1Q9Y3Y4 419 aa5.3□□□□□ -1.56
SMAD4-204ENST00000586253 LINC01546A6NGU7 62 aa5.29□□□□□ -1.56
SMAD4-204ENST00000586253 CCL25O15444 150 aa5.29□□□□□ -1.56
SMAD4-204ENST00000586253 MRPS36P82909 103 aaKnown RBP5.29□□□□□ -1.56
SMAD4-204ENST00000586253 C14orf177Q52M58 125 aa5.29□□□□□ -1.56
SMAD4-204ENST00000586253 KRTAP26-1Q6PEX3 210 aa5.29□□□□□ -1.56
SMAD4-204ENST00000586253 Q8N814 137 aa5.29□□□□□ -1.56
SMAD4-204ENST00000586253 CYSLTR1Q9Y271 337 aa5.29□□□□□ -1.56
SMAD4-204ENST00000586253 IGLV10-54A0A075B6I4 117 aa5.28□□□□□ -1.56
SMAD4-204ENST00000586253 LINC01549A6NIU2 74 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms