RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CLPSL2Q6UWE3 100 aa9.17□□□□□ -0.94
VMP1-203ENST00000586245 ZNF664Q8N3J9 261 aa9.17□□□□□ -0.94
VMP1-203ENST00000586245 RMI2Q96E14 147 aa9.17□□□□□ -0.94
VMP1-203ENST00000586245 CDC42SE2Q9NRR3 84 aa9.17□□□□□ -0.94
VMP1-203ENST00000586245 PYGO1Q9Y3Y4 419 aa9.17□□□□□ -0.94
VMP1-203ENST00000586245 IGKV3OR2-268A0A0C4DH90 116 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST1H2BKO60814 126 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST1H2BJP06899 126 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST1H2BOP23527 126 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST1H2BBP33778 126 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST1H2BDP58876 126 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST1H2BCP62807 126 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST2H2BEQ16778 126 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.16□□□□□ -0.94
VMP1-203ENST00000586245 ENHOQ6UWT2 76 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST1H2BHQ93079 126 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST1H2BNQ99877 126 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 HIST1H2BMQ99879 126 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 PRR34Q9NV39 138 aa9.16□□□□□ -0.94
VMP1-203ENST00000586245 DNAH2Q9P225 4427 aa9.15□□□□□ -0.94
VMP1-203ENST00000586245 HSBP1O75506 76 aa9.15□□□□□ -0.94
VMP1-203ENST00000586245 HBDP02042 147 aa9.15□□□□□ -0.94
VMP1-203ENST00000586245 MRPS36P82909 103 aaKnown RBP9.15□□□□□ -0.94
VMP1-203ENST00000586245 MIAQ16674 131 aa9.15□□□□□ -0.94
VMP1-203ENST00000586245 Q6ZUT4 128 aa9.15□□□□□ -0.94
VMP1-203ENST00000586245 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
VMP1-203ENST00000586245 SERF1AO75920 110 aa9.14□□□□□ -0.95
VMP1-203ENST00000586245 NPSP0C0P6 89 aa9.14□□□□□ -0.95
VMP1-203ENST00000586245 PMCHL1Q16048 86 aa9.14□□□□□ -0.95
VMP1-203ENST00000586245 PAPPA-AS1Q5QFB9 102 aa9.14□□□□□ -0.95
VMP1-203ENST00000586245 Q6ZN92 141 aa9.14□□□□□ -0.95
VMP1-203ENST00000586245 ERASQ7Z444 233 aa9.14□□□□□ -0.95
VMP1-203ENST00000586245 TMEM141Q96I45 108 aa9.14□□□□□ -0.95
VMP1-203ENST00000586245 TIMM17AQ99595 171 aa9.14□□□□□ -0.95
VMP1-203ENST00000586245 C1orf43Q9BWL3 253 aa9.14□□□□□ -0.95
VMP1-203ENST00000586245 TM2D2Q9BX73 214 aa9.14□□□□□ -0.95
VMP1-203ENST00000586245 IGLV4-3A0A075B6K6 122 aa9.13□□□□□ -0.95
VMP1-203ENST00000586245 IGKV2D-24A0A075B6R9 120 aa9.13□□□□□ -0.95
VMP1-203ENST00000586245 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
VMP1-203ENST00000586245 IGIPA6NJ69 53 aa9.13□□□□□ -0.95
VMP1-203ENST00000586245 PSCAO43653 123 aa9.13□□□□□ -0.95
VMP1-203ENST00000586245 RNASE13Q5GAN3 156 aaKnown RBP9.13□□□□□ -0.95
VMP1-203ENST00000586245 OPRPNQ99935 248 aaPredicted RBP9.13□□□□□ -0.95
VMP1-203ENST00000586245 COX11Q9Y6N1 276 aa9.13□□□□□ -0.95
VMP1-203ENST00000586245 A0A096LNJ9 63 aa9.12□□□□□ -0.95
VMP1-203ENST00000586245 TEX43Q6ZNM6 134 aa9.12□□□□□ -0.95
VMP1-203ENST00000586245 VCX2Q9H322 139 aa9.12□□□□□ -0.95
VMP1-203ENST00000586245 RYR3Q15413 4870 aa9.12□□□□□ -0.95
VMP1-203ENST00000586245 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
VMP1-203ENST00000586245 LINC00959A0A1B0GUT2 108 aa9.11□□□□□ -0.95
VMP1-203ENST00000586245 IFITM10A6NMD0 228 aa9.11□□□□□ -0.95
VMP1-203ENST00000586245 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.11□□□□□ -0.95
VMP1-203ENST00000586245 NDUFA6P56556 154 aa9.11□□□□□ -0.95
VMP1-203ENST00000586245 LINC00310P59036 64 aa9.11□□□□□ -0.95
VMP1-203ENST00000586245 SS18Q15532 418 aa9.11□□□□□ -0.95
VMP1-203ENST00000586245 FAM19A2Q8N3H0 131 aa9.11□□□□□ -0.95
VMP1-203ENST00000586245 C2orf88Q9BSF0 95 aa9.11□□□□□ -0.95
VMP1-203ENST00000586245 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
VMP1-203ENST00000586245 CCL25O15444 150 aa9.1□□□□□ -0.95
VMP1-203ENST00000586245 ATP5LO75964 103 aa9.1□□□□□ -0.95
VMP1-203ENST00000586245 PDZD11Q5EBL8 140 aa9.1□□□□□ -0.95
VMP1-203ENST00000586245 FAM104AQ969W3 186 aa9.1□□□□□ -0.95
VMP1-203ENST00000586245 FRAS1Q86XX4 4008 aa9.1□□□□□ -0.95
VMP1-203ENST00000586245 DNAH10Q8IVF4 4471 aa9.09□□□□□ -0.95
VMP1-203ENST00000586245 RTL8CO15255 209 aa9.09□□□□□ -0.95
VMP1-203ENST00000586245 NUPR1O60356 82 aa9.09□□□□□ -0.95
VMP1-203ENST00000586245 Q6ZRN7 208 aaPredicted RBP9.09□□□□□ -0.95
VMP1-203ENST00000586245 TMA7Q9Y2S6 64 aaKnown RBP9.09□□□□□ -0.95
VMP1-203ENST00000586245 COA6Q5JTJ3 125 aaKnown RBP9.08□□□□□ -0.96
VMP1-203ENST00000586245 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
VMP1-203ENST00000586245 CHCHD10Q8WYQ3 142 aaPredicted RBP9.08□□□□□ -0.96
VMP1-203ENST00000586245 AMELXQ99217 191 aa9.08□□□□□ -0.96
VMP1-203ENST00000586245 DNAH17Q9UFH2 4485 aa9.08□□□□□ -0.96
VMP1-203ENST00000586245 GAGE12HA6NDE8 117 aa9.07□□□□□ -0.96
VMP1-203ENST00000586245 LEPROTL1O95214 131 aa9.07□□□□□ -0.96
VMP1-203ENST00000586245 XCL1P47992 114 aa9.07□□□□□ -0.96
VMP1-203ENST00000586245 ZC2HC1BQ5TFG8 222 aa9.07□□□□□ -0.96
VMP1-203ENST00000586245 BAALCQ8WXS3 180 aa9.07□□□□□ -0.96
VMP1-203ENST00000586245 S100A6P06703 90 aa9.06□□□□□ -0.96
VMP1-203ENST00000586245 LINC00173Q6ZV60 143 aa9.06□□□□□ -0.96
VMP1-203ENST00000586245 IFI27L1Q96BM0 104 aa9.06□□□□□ -0.96
VMP1-203ENST00000586245 HSPB8Q9UJY1 196 aa9.06□□□□□ -0.96
VMP1-203ENST00000586245 PRSS29PA6NIE9 313 aa9.05□□□□□ -0.96
VMP1-203ENST00000586245 PRSS1P07477 247 aa9.05□□□□□ -0.96
VMP1-203ENST00000586245 FABP4P15090 132 aa9.05□□□□□ -0.96
VMP1-203ENST00000586245 UBE2D1P51668 147 aa9.05□□□□□ -0.96
VMP1-203ENST00000586245 PMVKQ15126 192 aa9.05□□□□□ -0.96
VMP1-203ENST00000586245 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
VMP1-203ENST00000586245 CD164L2Q6UWJ8 174 aa9.05□□□□□ -0.96
VMP1-203ENST00000586245 EREGO14944 169 aa9.04□□□□□ -0.96
VMP1-203ENST00000586245 SEC11AP67812 179 aa9.04□□□□□ -0.96
VMP1-203ENST00000586245 TNP2Q05952 138 aa9.04□□□□□ -0.96
VMP1-203ENST00000586245 CST9LQ9H4G1 147 aa9.04□□□□□ -0.96
VMP1-203ENST00000586245 FAT2Q9NYQ8 4349 aa9.03□□□□□ -0.96
VMP1-203ENST00000586245 FOXI1Q12951 378 aa9.03□□□□□ -0.96
VMP1-203ENST00000586245 LCE2DQ5TA82 110 aaPredicted RBP9.03□□□□□ -0.96
VMP1-203ENST00000586245 MAPKAPK5-AS1Q8N8E1 139 aa9.03□□□□□ -0.96
VMP1-203ENST00000586245 PACRGQ96M98 296 aaPredicted RBP9.03□□□□□ -0.96
VMP1-203ENST00000586245 COX7A2LO14548 114 aa9.02□□□□□ -0.97
VMP1-203ENST00000586245 LINC00242Q5T6M2 205 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms