RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 PLNP26678 52 aa12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 MRPS36P82909 103 aaKnown RBP12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 AMMECR1LQ6DCA0 310 aa12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 VCX2Q9H322 139 aa12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 CHTOPQ9Y3Y2 248 aaKnown RBP12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 TRAV9-2A0A087WT02 112 aa12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 DPM2O94777 84 aa12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 FGF6P10767 208 aa12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 ZNF25P17030 456 aaPredicted RBP12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 TMEM101Q96IK0 257 aa12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 CST9LQ9H4G1 147 aa12.35□□□□□ -0.43
RBFOX1-222ENST00000585867 A0A096LPF7 62 aa12.34□□□□□ -0.43
RBFOX1-222ENST00000585867 PRSS29PA6NIE9 313 aa12.34□□□□□ -0.43
RBFOX1-222ENST00000585867 IGKCP01834 107 aa12.34□□□□□ -0.43
RBFOX1-222ENST00000585867 ATOH7Q8N100 152 aa12.34□□□□□ -0.43
RBFOX1-222ENST00000585867 C15orf53Q8NAA6 179 aa12.34□□□□□ -0.43
RBFOX1-222ENST00000585867 PMCHL2Q9BQD1 86 aa12.34□□□□□ -0.43
RBFOX1-222ENST00000585867 CHCHD5Q9BSY4 110 aa12.34□□□□□ -0.43
RBFOX1-222ENST00000585867 APLNQ9ULZ1 77 aa12.34□□□□□ -0.43
RBFOX1-222ENST00000585867 TCTAP57738 103 aa12.33□□□□□ -0.44
RBFOX1-222ENST00000585867 TIRAPP58753 221 aa12.33□□□□□ -0.44
RBFOX1-222ENST00000585867 PKIAP61925 76 aa12.33□□□□□ -0.44
RBFOX1-222ENST00000585867 C2orf88Q9BSF0 95 aa12.33□□□□□ -0.44
RBFOX1-222ENST00000585867 OR5A1Q8NGJ0 315 aa12.32□□□□□ -0.44
RBFOX1-222ENST00000585867 AMELXQ99217 191 aa12.32□□□□□ -0.44
RBFOX1-222ENST00000585867 MRPL35Q9NZE8 188 aaKnown RBP12.32□□□□□ -0.44
RBFOX1-222ENST00000585867 PAM16Q9Y3D7 125 aa12.31□□□□□ -0.44
RBFOX1-222ENST00000585867 OPRPNQ99935 248 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-222ENST00000585867 GAGE6Q13070 117 aa12.3□□□□□ -0.44
RBFOX1-222ENST00000585867 SPATA45Q537H7 98 aa12.3□□□□□ -0.44
RBFOX1-222ENST00000585867 LELP1Q5T871 98 aa12.3□□□□□ -0.44
RBFOX1-222ENST00000585867 Q6ZUT4 128 aa12.3□□□□□ -0.44
RBFOX1-222ENST00000585867 DNAH7Q8WXX0 4024 aa12.3□□□□□ -0.44
RBFOX1-222ENST00000585867 TSTD3H0UI37 97 aa12.29□□□□□ -0.44
RBFOX1-222ENST00000585867 ZNF664Q8N3J9 261 aa12.28□□□□□ -0.44
RBFOX1-222ENST00000585867 FAM104AQ969W3 186 aa12.28□□□□□ -0.44
RBFOX1-222ENST00000585867 CDC42SE2Q9NRR3 84 aa12.27□□□□□ -0.44
RBFOX1-222ENST00000585867 A0A1B0GUV1 79 aa12.26□□□□□ -0.45
RBFOX1-222ENST00000585867 hDV102S1A0JD36 115 aa12.26□□□□□ -0.45
RBFOX1-222ENST00000585867 ZC2HC1BQ5TFG8 222 aa12.26□□□□□ -0.45
RBFOX1-222ENST00000585867 IGLV4-69A0A075B6H9 119 aa12.26□□□□□ -0.45
RBFOX1-222ENST00000585867 TRAV8-6A0A0B4J262 113 aa12.26□□□□□ -0.45
RBFOX1-222ENST00000585867 TMEM262E9PQX1 116 aa12.26□□□□□ -0.45
RBFOX1-222ENST00000585867 IGLC3P0DOY3 106 aa12.26□□□□□ -0.45
RBFOX1-222ENST00000585867 LYPD5Q6UWN5 251 aa12.26□□□□□ -0.45
RBFOX1-222ENST00000585867 NFE4Q86UQ8 179 aa12.26□□□□□ -0.45
RBFOX1-222ENST00000585867 MAJINQ3KP22 176 aa12.25□□□□□ -0.45
RBFOX1-222ENST00000585867 CSMD3Q7Z407 3707 aa12.24□□□□□ -0.45
RBFOX1-222ENST00000585867 SEC11AP67812 179 aa12.24□□□□□ -0.45
RBFOX1-222ENST00000585867 RNASE13Q5GAN3 156 aaKnown RBP12.24□□□□□ -0.45
RBFOX1-222ENST00000585867 CHAC1Q9BUX1 264 aa12.24□□□□□ -0.45
RBFOX1-222ENST00000585867 UBE2D1P51668 147 aa12.23□□□□□ -0.45
RBFOX1-222ENST00000585867 STARD9Q9P2P6 4700 aa12.23□□□□□ -0.45
RBFOX1-222ENST00000585867 TINCRA0A1B0GVN0 87 aa12.22□□□□□ -0.45
RBFOX1-222ENST00000585867 C11orf86A6NJI1 115 aa12.22□□□□□ -0.45
RBFOX1-222ENST00000585867 HERVK_113P61574 105 aa12.22□□□□□ -0.45
RBFOX1-222ENST00000585867 RBX1P62877 108 aa12.22□□□□□ -0.45
RBFOX1-222ENST00000585867 ESRGQ1W209 222 aa12.22□□□□□ -0.45
RBFOX1-222ENST00000585867 PRO1933Q9H354 126 aa12.22□□□□□ -0.45
RBFOX1-222ENST00000585867 CCL18P55774 89 aa12.22□□□□□ -0.45
RBFOX1-222ENST00000585867 TENM2Q9NT68 2774 aa12.21□□□□□ -0.45
RBFOX1-222ENST00000585867 IGLV4-60A0A075B6I1 120 aa12.21□□□□□ -0.46
RBFOX1-222ENST00000585867 A0A0J9YXV3 536 aa12.21□□□□□ -0.46
RBFOX1-222ENST00000585867 MPV17L2Q567V2 206 aa12.21□□□□□ -0.46
RBFOX1-222ENST00000585867 FAM19A3Q7Z5A8 133 aa12.21□□□□□ -0.46
RBFOX1-222ENST00000585867 STPG4Q8N801 248 aa12.21□□□□□ -0.46
RBFOX1-222ENST00000585867 GEMIN7Q9H840 131 aaKnown RBP12.21□□□□□ -0.46
RBFOX1-222ENST00000585867 DYNC2H1Q8NCM8 4307 aaKnown RBP12.21□□□□□ -0.46
RBFOX1-222ENST00000585867 TMEM170BQ5T4T1 132 aa12.2□□□□□ -0.46
RBFOX1-222ENST00000585867 HERVK_113P63121 156 aa12.19□□□□□ -0.46
RBFOX1-222ENST00000585867 ANKRD39Q53RE8 183 aa12.19□□□□□ -0.46
RBFOX1-222ENST00000585867 UBE2DNLQ8IWF7 75 aa12.19□□□□□ -0.46
RBFOX1-222ENST00000585867 LINC00588Q9Y4M8 146 aa12.19□□□□□ -0.46
RBFOX1-222ENST00000585867 UQCR10Q9UDW1 63 aa12.18□□□□□ -0.46
RBFOX1-222ENST00000585867 TRAV13-1A0A0B4J241 112 aa12.18□□□□□ -0.46
RBFOX1-222ENST00000585867 CCL25O15444 150 aa12.18□□□□□ -0.46
RBFOX1-222ENST00000585867 ZNF22P17026 224 aaPredicted RBP12.18□□□□□ -0.46
RBFOX1-222ENST00000585867 MIEN1Q9BRT3 115 aa12.18□□□□□ -0.46
RBFOX1-222ENST00000585867 PCP4L1A6NKN8 68 aa12.17□□□□□ -0.46
RBFOX1-222ENST00000585867 H3BRM9 83 aa12.17□□□□□ -0.46
RBFOX1-222ENST00000585867 LY6G6CO95867 125 aa12.17□□□□□ -0.46
RBFOX1-222ENST00000585867 E9PLD3 99 aa12.16□□□□□ -0.46
RBFOX1-222ENST00000585867 COX8AP10176 69 aa12.16□□□□□ -0.46
RBFOX1-222ENST00000585867 NMUP48645 174 aa12.16□□□□□ -0.46
RBFOX1-222ENST00000585867 LINC00242Q5T6M2 205 aa12.16□□□□□ -0.46
RBFOX1-222ENST00000585867 LINC00476Q8WZB0 136 aa12.16□□□□□ -0.46
RBFOX1-222ENST00000585867 IGLV5-45A0A087WSX0 123 aa12.15□□□□□ -0.46
RBFOX1-222ENST00000585867 ANGP03950 147 aaKnown RBP12.15□□□□□ -0.46
RBFOX1-222ENST00000585867 SLC25A34Q6PIV7 304 aa12.15□□□□□ -0.46
RBFOX1-222ENST00000585867 LINC00469Q8N7U9 141 aa12.15□□□□□ -0.46
RBFOX1-222ENST00000585867 C14orf144Q96I85 54 aa12.15□□□□□ -0.46
RBFOX1-222ENST00000585867 MRPS16Q9Y3D3 137 aaKnown RBP12.15□□□□□ -0.46
RBFOX1-222ENST00000585867 PLECQ15149 4684 aaKnown RBP12.15□□□□□ -0.47
RBFOX1-222ENST00000585867 TMEM223A0PJW6 202 aa12.14□□□□□ -0.47
RBFOX1-222ENST00000585867 SS18Q15532 418 aa12.14□□□□□ -0.47
RBFOX1-222ENST00000585867 DDTP30046 118 aa12.13□□□□□ -0.47
RBFOX1-222ENST00000585867 IGKV3OR2-268A0A0C4DH90 116 aa12.13□□□□□ -0.47
RBFOX1-222ENST00000585867 LINC00959A0A1B0GUT2 108 aa12.13□□□□□ -0.47
RBFOX1-222ENST00000585867 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
RBFOX1-222ENST00000585867 DLEU1O43261 78 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms