RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 LINC01600Q96MT4 127 aa9.62□□□□□ -0.87
CSNK1D-222ENST00000584377 LGALS3P17931 250 aaKnown RBP9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 MRPL23Q16540 153 aaKnown RBP9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 PIK3CD-AS1Q5SR53 167 aa9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 NBPF19A0A087WUL8 3843 aa9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 DNAJC9-AS1A6NH13 148 aa9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 CSDC2Q9Y534 153 aaKnown RBP9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 AKAP9Q99996 3911 aa9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 TMEM223A0PJW6 202 aa9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 INSP01308 110 aa9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 CD28P10747 220 aa9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 C11orf44Q8N8P7 122 aa9.61□□□□□ -0.87
CSNK1D-222ENST00000584377 FLNAP21333 2647 aaKnown RBP9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 NF1P21359 2839 aa9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 A0A0J9YXV3 536 aa9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 ZNF22P17026 224 aaPredicted RBP9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 C11orf72Q8NBR9 251 aa9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 AMELXQ99217 191 aa9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 LINC00694P0DN24 101 aa9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 Q1RN00 199 aa9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 Q6ZSN1 163 aa9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 Q9UF83 564 aa9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 PYGO1Q9Y3Y4 419 aa9.6□□□□□ -0.87
CSNK1D-222ENST00000584377 A0A1W2PRX2 142 aa9.59□□□□□ -0.87
CSNK1D-222ENST00000584377 DNAJC30Q96LL9 226 aa9.59□□□□□ -0.87
CSNK1D-222ENST00000584377 WNK1Q9H4A3 2382 aa9.59□□□□□ -0.87
CSNK1D-222ENST00000584377 A0A0B4J2C4 111 aa9.59□□□□□ -0.87
CSNK1D-222ENST00000584377 LEPROTO15243 131 aa9.59□□□□□ -0.87
CSNK1D-222ENST00000584377 LINC00467Q9BRT7 94 aa9.59□□□□□ -0.87
CSNK1D-222ENST00000584377 IGHV3-64A0A075B6Q5 118 aa9.58□□□□□ -0.88
CSNK1D-222ENST00000584377 ODF3L2Q3SX64 289 aa9.58□□□□□ -0.88
CSNK1D-222ENST00000584377 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
CSNK1D-222ENST00000584377 NACAE9PAV3 2078 aa9.58□□□□□ -0.88
CSNK1D-222ENST00000584377 C5orf47Q569G3 176 aa9.58□□□□□ -0.88
CSNK1D-222ENST00000584377 CEMP1Q6PRD7 247 aaPredicted RBP9.58□□□□□ -0.88
CSNK1D-222ENST00000584377 SPXQ9BT56 116 aa9.58□□□□□ -0.88
CSNK1D-222ENST00000584377 XCL2Q9UBD3 114 aa9.58□□□□□ -0.88
CSNK1D-222ENST00000584377 SETD2Q9BYW2 2564 aaPredicted RBP9.58□□□□□ -0.88
CSNK1D-222ENST00000584377 TRBV7-7A0A0K0K1E9 115 aa9.57□□□□□ -0.88
CSNK1D-222ENST00000584377 FAM104AQ969W3 186 aa9.57□□□□□ -0.88
CSNK1D-222ENST00000584377 ESM1Q9NQ30 184 aa9.57□□□□□ -0.88
CSNK1D-222ENST00000584377 MUSTN1Q8IVN3 82 aa9.57□□□□□ -0.88
CSNK1D-222ENST00000584377 STHQ8IWL8 128 aa9.57□□□□□ -0.88
CSNK1D-222ENST00000584377 TRAV25A0A0B4J276 109 aa9.56□□□□□ -0.88
CSNK1D-222ENST00000584377 LOC107984640A0A0U1RRK4 108 aa9.56□□□□□ -0.88
CSNK1D-222ENST00000584377 CCL24O00175 119 aa9.56□□□□□ -0.88
CSNK1D-222ENST00000584377 IGHV3-53P01767 116 aa9.56□□□□□ -0.88
CSNK1D-222ENST00000584377 BEAN1Q3B7T3 259 aa9.56□□□□□ -0.88
CSNK1D-222ENST00000584377 FAM240AA0A1B0GVK7 77 aa9.56□□□□□ -0.88
CSNK1D-222ENST00000584377 TRIAP1O43715 76 aa9.56□□□□□ -0.88
CSNK1D-222ENST00000584377 RNASE13Q5GAN3 156 aaKnown RBP9.56□□□□□ -0.88
CSNK1D-222ENST00000584377 CHCHD7Q9BUK0 85 aa9.56□□□□□ -0.88
CSNK1D-222ENST00000584377 IGHV3OR16-12A0A075B7B8 117 aa9.55□□□□□ -0.88
CSNK1D-222ENST00000584377 TRBV30A0A0K0K1B3 111 aa9.55□□□□□ -0.88
CSNK1D-222ENST00000584377 FAM236AA0A1B0GUQ0 79 aa9.55□□□□□ -0.88
CSNK1D-222ENST00000584377 FAM236BA0A1B0GV22 79 aa9.55□□□□□ -0.88
CSNK1D-222ENST00000584377 H7C423 109 aa9.55□□□□□ -0.88
CSNK1D-222ENST00000584377 MRPS36P82909 103 aaKnown RBP9.55□□□□□ -0.88
CSNK1D-222ENST00000584377 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.54□□□□□ -0.88
CSNK1D-222ENST00000584377 IGHV3-38A0A0C4DH36 116 aa9.54□□□□□ -0.88
CSNK1D-222ENST00000584377 RS1O15537 224 aa9.54□□□□□ -0.88
CSNK1D-222ENST00000584377 C9orf153Q5TBE3 101 aa9.54□□□□□ -0.88
CSNK1D-222ENST00000584377 HIST2H2BCQ6DN03 193 aa9.54□□□□□ -0.88
CSNK1D-222ENST00000584377 TMEM101Q96IK0 257 aa9.54□□□□□ -0.88
CSNK1D-222ENST00000584377 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.54□□□□□ -0.88
CSNK1D-222ENST00000584377 IGKV2-29A2NJV5 120 aaPredicted RBP9.54□□□□□ -0.88
CSNK1D-222ENST00000584377 UBE2D4Q9Y2X8 147 aa9.54□□□□□ -0.88
CSNK1D-222ENST00000584377 NDUFA7O95182 113 aa9.53□□□□□ -0.88
CSNK1D-222ENST00000584377 TIMM21Q9BVV7 248 aa9.53□□□□□ -0.88
CSNK1D-222ENST00000584377 IGHV3-30-3P0DP02 117 aa9.53□□□□□ -0.88
CSNK1D-222ENST00000584377 C1orf158Q8N1D5 194 aa9.53□□□□□ -0.88
CSNK1D-222ENST00000584377 CITED2Q99967 270 aaPredicted RBP9.53□□□□□ -0.88
CSNK1D-222ENST00000584377 TENM4Q6N022 2769 aa9.53□□□□□ -0.88
CSNK1D-222ENST00000584377 H3BT86 120 aa9.53□□□□□ -0.88
CSNK1D-222ENST00000584377 ACANP16112 2415 aa9.52□□□□□ -0.88
CSNK1D-222ENST00000584377 C3orf22Q8N5N4 141 aa9.52□□□□□ -0.89
CSNK1D-222ENST00000584377 NOTCH3Q9UM47 2321 aa9.52□□□□□ -0.89
CSNK1D-222ENST00000584377 MTORP42345 2549 aa9.52□□□□□ -0.89
CSNK1D-222ENST00000584377 SMIM9A6NGZ8 99 aa9.52□□□□□ -0.89
CSNK1D-222ENST00000584377 TRGV1A0A0A0MS02 117 aa9.51□□□□□ -0.89
CSNK1D-222ENST00000584377 TRAV8-3A0A0A6YYJ7 113 aa9.51□□□□□ -0.89
CSNK1D-222ENST00000584377 HERVK_113P63121 156 aa9.51□□□□□ -0.89
CSNK1D-222ENST00000584377 DEFB121Q5J5C9 76 aa9.51□□□□□ -0.89
CSNK1D-222ENST00000584377 A0A0J9YXY3 114 aa9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 TINCRA0A1B0GVN0 87 aa9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 ADARB2-AS1A8MUL3 147 aa9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 IGHV1-58A0A0C4DH39 117 aa9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 JMJD1CQ15652 2540 aa9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 NIPBLQ6KC79 2804 aaeCLIP9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 FAM19A5Q7Z5A7 132 aaPredicted RBP9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 LINC01006Q8NI28 216 aa9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 IL17DQ8TAD2 202 aa9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 ICOSQ9Y6W8 199 aa9.5□□□□□ -0.89
CSNK1D-222ENST00000584377 UQCRQO14949 82 aa9.49□□□□□ -0.89
CSNK1D-222ENST00000584377 J3KT08 172 aa9.49□□□□□ -0.89
CSNK1D-222ENST00000584377 KRTAP1-1Q07627 177 aa9.49□□□□□ -0.89
CSNK1D-222ENST00000584377 KLK5Q9Y337 293 aaPredicted RBP9.49□□□□□ -0.89
CSNK1D-222ENST00000584377 CLEC2BQ92478 149 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 1549.3 ms