RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 CCL25O15444 150 aa9.69□□□□□ -0.86
SCN4A-203ENST00000584310 ESDP10768 282 aa9.69□□□□□ -0.86
SCN4A-203ENST00000584310 RAB5AP20339 215 aa9.69□□□□□ -0.86
SCN4A-203ENST00000584310 CLLU1Q5K131 121 aa9.69□□□□□ -0.86
SCN4A-203ENST00000584310 MRPL52Q86TS9 123 aaKnown RBP9.69□□□□□ -0.86
SCN4A-203ENST00000584310 C9orf163Q8N9P6 203 aa9.69□□□□□ -0.86
SCN4A-203ENST00000584310 IGHV3-64A0A075B6Q5 118 aa9.68□□□□□ -0.86
SCN4A-203ENST00000584310 PHOX2AO14813 284 aa9.68□□□□□ -0.86
SCN4A-203ENST00000584310 CNBPP62633 177 aaKnown RBP9.68□□□□□ -0.86
SCN4A-203ENST00000584310 UQCC3Q6UW78 93 aa9.68□□□□□ -0.86
SCN4A-203ENST00000584310 ORMDL3Q8N138 153 aa9.68□□□□□ -0.86
SCN4A-203ENST00000584310 ZNF664Q8N3J9 261 aa9.68□□□□□ -0.86
SCN4A-203ENST00000584310 TRBV24-1A0A075B6N3 115 aa9.67□□□□□ -0.86
SCN4A-203ENST00000584310 C1orf196B1AJZ1 125 aa9.67□□□□□ -0.86
SCN4A-203ENST00000584310 D6R8Y8 96 aa9.67□□□□□ -0.86
SCN4A-203ENST00000584310 TNFRSF6BO95407 300 aa9.67□□□□□ -0.86
SCN4A-203ENST00000584310 XCL1P47992 114 aa9.67□□□□□ -0.86
SCN4A-203ENST00000584310 RPL32P62910 135 aaKnown RBP9.67□□□□□ -0.86
SCN4A-203ENST00000584310 KRTAP26-1Q6PEX3 210 aa9.67□□□□□ -0.86
SCN4A-203ENST00000584310 SCXQ7RTU7 201 aa9.67□□□□□ -0.86
SCN4A-203ENST00000584310 LINC00528Q8N1L1 170 aa9.67□□□□□ -0.86
SCN4A-203ENST00000584310 NRACQ8N912 160 aa9.67□□□□□ -0.86
SCN4A-203ENST00000584310 CSDC2Q9Y534 153 aaKnown RBP9.67□□□□□ -0.86
SCN4A-203ENST00000584310 DNAH5Q8TE73 4624 aa9.67□□□□□ -0.86
SCN4A-203ENST00000584310 LINC00959A0A1B0GUT2 108 aa9.66□□□□□ -0.86
SCN4A-203ENST00000584310 GAS8-AS1O95177 125 aa9.66□□□□□ -0.86
SCN4A-203ENST00000584310 MALP21145 153 aa9.66□□□□□ -0.86
SCN4A-203ENST00000584310 CDC42SE2Q9NRR3 84 aa9.66□□□□□ -0.86
SCN4A-203ENST00000584310 PCLOQ9Y6V0 5065 aa9.65□□□□□ -0.86
SCN4A-203ENST00000584310 IGHV1-58A0A0C4DH39 117 aa9.65□□□□□ -0.86
SCN4A-203ENST00000584310 TMEM136Q6ZRR5 245 aa9.65□□□□□ -0.86
SCN4A-203ENST00000584310 SMIM2Q9BVW6 85 aa9.65□□□□□ -0.86
SCN4A-203ENST00000584310 LAMTOR2Q9Y2Q5 125 aa9.65□□□□□ -0.86
SCN4A-203ENST00000584310 A0A1B0GXF2 115 aa9.64□□□□□ -0.87
SCN4A-203ENST00000584310 ZNF561-AS1K7EIQ3 104 aa9.64□□□□□ -0.87
SCN4A-203ENST00000584310 CD164L2Q6UWJ8 174 aa9.64□□□□□ -0.87
SCN4A-203ENST00000584310 APOMO95445 188 aa9.63□□□□□ -0.87
SCN4A-203ENST00000584310 HIGD2BQ4VC39 106 aa9.63□□□□□ -0.87
SCN4A-203ENST00000584310 CIRBP-AS1Q8TBR5 109 aa9.63□□□□□ -0.87
SCN4A-203ENST00000584310 PRELID3AQ96N28 172 aa9.63□□□□□ -0.87
SCN4A-203ENST00000584310 TIMM21Q9BVV7 248 aa9.63□□□□□ -0.87
SCN4A-203ENST00000584310 SPANXA1Q9NS26 97 aa9.63□□□□□ -0.87
SCN4A-203ENST00000584310 HSPG2P98160 4391 aa9.63□□□□□ -0.87
SCN4A-203ENST00000584310 S100PP25815 95 aa9.62□□□□□ -0.87
SCN4A-203ENST00000584310 MAP1LC3AQ9H492 121 aa9.62□□□□□ -0.87
SCN4A-203ENST00000584310 UBE2D4Q9Y2X8 147 aa9.62□□□□□ -0.87
SCN4A-203ENST00000584310 GVQW2A0A096LPI5 108 aaPredicted RBP9.61□□□□□ -0.87
SCN4A-203ENST00000584310 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
SCN4A-203ENST00000584310 COX7A2LO14548 114 aa9.61□□□□□ -0.87
SCN4A-203ENST00000584310 IFI27P40305 119 aaPredicted RBP9.61□□□□□ -0.87
SCN4A-203ENST00000584310 FOXI1Q12951 378 aa9.61□□□□□ -0.87
SCN4A-203ENST00000584310 IMMP2LQ96T52 175 aa9.61□□□□□ -0.87
SCN4A-203ENST00000584310 CTDSP1Q9GZU7 261 aa9.61□□□□□ -0.87
SCN4A-203ENST00000584310 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
SCN4A-203ENST00000584310 NPYP01303 97 aa9.6□□□□□ -0.87
SCN4A-203ENST00000584310 G0S2P27469 103 aa9.6□□□□□ -0.87
SCN4A-203ENST00000584310 SDIM1Q6ZPB5 146 aa9.6□□□□□ -0.87
SCN4A-203ENST00000584310 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
SCN4A-203ENST00000584310 TMEM218A2RU14 115 aa9.59□□□□□ -0.87
SCN4A-203ENST00000584310 APOBP04114 4563 aaKnown RBP9.59□□□□□ -0.87
SCN4A-203ENST00000584310 TRAV9-1A0A075B6T8 112 aa9.58□□□□□ -0.88
SCN4A-203ENST00000584310 Q6ZN92 141 aa9.58□□□□□ -0.88
SCN4A-203ENST00000584310 IFITM10A6NMD0 228 aa9.57□□□□□ -0.88
SCN4A-203ENST00000584310 K7EMI3 77 aa9.57□□□□□ -0.88
SCN4A-203ENST00000584310 RPL37AP61513 92 aaKnown RBP9.57□□□□□ -0.88
SCN4A-203ENST00000584310 ORMDL2Q53FV1 153 aa9.57□□□□□ -0.88
SCN4A-203ENST00000584310 C7orf33Q8WU49 177 aa9.57□□□□□ -0.88
SCN4A-203ENST00000584310 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
SCN4A-203ENST00000584310 SEC11CQ9BY50 192 aa9.57□□□□□ -0.88
SCN4A-203ENST00000584310 LOC389332A0A1B0GUA5 103 aa9.56□□□□□ -0.88
SCN4A-203ENST00000584310 J3QL48 77 aa9.56□□□□□ -0.88
SCN4A-203ENST00000584310 MRPS36P82909 103 aaKnown RBP9.56□□□□□ -0.88
SCN4A-203ENST00000584310 RNASE13Q5GAN3 156 aaKnown RBP9.56□□□□□ -0.88
SCN4A-203ENST00000584310 Q6ZUT4 128 aa9.56□□□□□ -0.88
SCN4A-203ENST00000584310 C2orf88Q9BSF0 95 aa9.56□□□□□ -0.88
SCN4A-203ENST00000584310 NXT2Q9NPJ8 142 aaKnown RBP9.56□□□□□ -0.88
SCN4A-203ENST00000584310 TGIF2-C20orf24A0A0A6YYL0 155 aa9.55□□□□□ -0.88
SCN4A-203ENST00000584310 RPL39P62891 51 aaKnown RBP9.55□□□□□ -0.88
SCN4A-203ENST00000584310 COX6A2Q02221 97 aa9.55□□□□□ -0.88
SCN4A-203ENST00000584310 SYCNQ0VAF6 134 aa9.55□□□□□ -0.88
SCN4A-203ENST00000584310 COX19Q49B96 90 aa9.55□□□□□ -0.88
SCN4A-203ENST00000584310 PAPPA-AS1Q5QFB9 102 aa9.55□□□□□ -0.88
SCN4A-203ENST00000584310 COMMD7Q86VX2 200 aa9.55□□□□□ -0.88
SCN4A-203ENST00000584310 CYSLTR1Q9Y271 337 aa9.55□□□□□ -0.88
SCN4A-203ENST00000584310 MAJINQ3KP22 176 aa9.54□□□□□ -0.88
SCN4A-203ENST00000584310 Q8N8P6 123 aa9.54□□□□□ -0.88
SCN4A-203ENST00000584310 CAMK2N2Q96S95 79 aa9.54□□□□□ -0.88
SCN4A-203ENST00000584310 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.54□□□□□ -0.88
SCN4A-203ENST00000584310 ABCA13Q86UQ4 5058 aa9.53□□□□□ -0.88
SCN4A-203ENST00000584310 IGKV2-24A0A0C4DH68 120 aa9.53□□□□□ -0.88
SCN4A-203ENST00000584310 PRSS47A8MTI9 375 aa9.53□□□□□ -0.88
SCN4A-203ENST00000584310 NDUFA5Q16718 116 aa9.53□□□□□ -0.88
SCN4A-203ENST00000584310 TEX43Q6ZNM6 134 aa9.53□□□□□ -0.88
SCN4A-203ENST00000584310 PYGO1Q9Y3Y4 419 aa9.53□□□□□ -0.88
SCN4A-203ENST00000584310 IGLV4-69A0A075B6H9 119 aa9.52□□□□□ -0.89
SCN4A-203ENST00000584310 SLPIP03973 132 aa9.52□□□□□ -0.89
SCN4A-203ENST00000584310 IFITM2Q01629 132 aa9.52□□□□□ -0.89
SCN4A-203ENST00000584310 CIRBPQ14011 172 aaKnown RBP9.52□□□□□ -0.89
SCN4A-203ENST00000584310 C5orf38Q86SI9 138 aa9.52□□□□□ -0.89
SCN4A-203ENST00000584310 OR10D4PQ8NGN7 298 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms