RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 MRPL52Q86TS9 123 aaKnown RBP10.16□□□□□ -0.78
ITGB4-210ENST00000584025 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.15□□□□□ -0.78
ITGB4-210ENST00000584025 RAB5AP20339 215 aa10.15□□□□□ -0.78
ITGB4-210ENST00000584025 KIAA1644Q3SXP7 199 aa10.15□□□□□ -0.78
ITGB4-210ENST00000584025 COX19Q49B96 90 aa10.15□□□□□ -0.78
ITGB4-210ENST00000584025 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.78
ITGB4-210ENST00000584025 C14orf177Q52M58 125 aa10.14□□□□□ -0.79
ITGB4-210ENST00000584025 KRTAP26-1Q6PEX3 210 aa10.14□□□□□ -0.79
ITGB4-210ENST00000584025 PRSS47A8MTI9 375 aa10.13□□□□□ -0.79
ITGB4-210ENST00000584025 USP17L23D6RBM5 183 aa10.13□□□□□ -0.79
ITGB4-210ENST00000584025 GCSHP23434 173 aa10.13□□□□□ -0.79
ITGB4-210ENST00000584025 SLC7A5P1Q8MH63 180 aa10.13□□□□□ -0.79
ITGB4-210ENST00000584025 ZNF664Q8N3J9 261 aa10.13□□□□□ -0.79
ITGB4-210ENST00000584025 Q8N8P6 123 aa10.13□□□□□ -0.79
ITGB4-210ENST00000584025 CDC42SE2Q9NRR3 84 aa10.13□□□□□ -0.79
ITGB4-210ENST00000584025 UBE2D4Q9Y2X8 147 aa10.13□□□□□ -0.79
ITGB4-210ENST00000584025 DYNC1H1Q14204 4646 aaKnown RBP10.12□□□□□ -0.79
ITGB4-210ENST00000584025 TGIF2-C20orf24A0A0A6YYL0 155 aa10.12□□□□□ -0.79
ITGB4-210ENST00000584025 GAGE12HA6NDE8 117 aa10.12□□□□□ -0.79
ITGB4-210ENST00000584025 RPL39P62891 51 aaKnown RBP10.12□□□□□ -0.79
ITGB4-210ENST00000584025 CHCHD10Q8WYQ3 142 aaPredicted RBP10.12□□□□□ -0.79
ITGB4-210ENST00000584025 MT-ND6P03923 174 aa10.11□□□□□ -0.79
ITGB4-210ENST00000584025 FABP9Q0Z7S8 132 aa10.11□□□□□ -0.79
ITGB4-210ENST00000584025 TIMM21Q9BVV7 248 aa10.11□□□□□ -0.79
ITGB4-210ENST00000584025 MRPL18Q9H0U6 180 aaKnown RBP10.11□□□□□ -0.79
ITGB4-210ENST00000584025 CSDC2Q9Y534 153 aaKnown RBP10.11□□□□□ -0.79
ITGB4-210ENST00000584025 LINC00959A0A1B0GUT2 108 aa10.1□□□□□ -0.79
ITGB4-210ENST00000584025 KRTAP10-1P60331 282 aa10.1□□□□□ -0.79
ITGB4-210ENST00000584025 SS18Q15532 418 aa10.1□□□□□ -0.79
ITGB4-210ENST00000584025 RNASE13Q5GAN3 156 aaKnown RBP10.1□□□□□ -0.79
ITGB4-210ENST00000584025 Q6ZUT4 128 aa10.1□□□□□ -0.79
ITGB4-210ENST00000584025 NXT2Q9NPJ8 142 aaKnown RBP10.1□□□□□ -0.79
ITGB4-210ENST00000584025 CCL25O15444 150 aa10.08□□□□□ -0.8
ITGB4-210ENST00000584025 CDK2AP2O75956 126 aa10.08□□□□□ -0.8
ITGB4-210ENST00000584025 IFI27P40305 119 aaPredicted RBP10.08□□□□□ -0.8
ITGB4-210ENST00000584025 XCL1P47992 114 aa10.08□□□□□ -0.8
ITGB4-210ENST00000584025 ORMDL2Q53FV1 153 aa10.08□□□□□ -0.8
ITGB4-210ENST00000584025 SPANXA1Q9NS26 97 aa10.08□□□□□ -0.8
ITGB4-210ENST00000584025 TRAPPC1Q9Y5R8 145 aa10.08□□□□□ -0.8
ITGB4-210ENST00000584025 KIAA1109Q2LD37 5005 aa10.08□□□□□ -0.8
ITGB4-210ENST00000584025 PRSS1P07477 247 aa10.07□□□□□ -0.8
ITGB4-210ENST00000584025 ALKBH7Q9BT30 221 aaPredicted RBP10.07□□□□□ -0.8
ITGB4-210ENST00000584025 DNAH5Q8TE73 4624 aa10.07□□□□□ -0.8
ITGB4-210ENST00000584025 TRAV13-1A0A0B4J241 112 aa10.06□□□□□ -0.8
ITGB4-210ENST00000584025 hDV102S1A0JD36 115 aa10.06□□□□□ -0.8
ITGB4-210ENST00000584025 K7EMI3 77 aa10.06□□□□□ -0.8
ITGB4-210ENST00000584025 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
ITGB4-210ENST00000584025 PRSS3P2Q8NHM4 247 aa10.06□□□□□ -0.8
ITGB4-210ENST00000584025 OPRPNQ99935 248 aaPredicted RBP10.06□□□□□ -0.8
ITGB4-210ENST00000584025 CYSLTR1Q9Y271 337 aa10.06□□□□□ -0.8
ITGB4-210ENST00000584025 C1orf196B1AJZ1 125 aa10.05□□□□□ -0.8
ITGB4-210ENST00000584025 MRPS36P82909 103 aaKnown RBP10.05□□□□□ -0.8
ITGB4-210ENST00000584025 FOXI1Q12951 378 aa10.05□□□□□ -0.8
ITGB4-210ENST00000584025 LINC01620Q4KN68 170 aa10.05□□□□□ -0.8
ITGB4-210ENST00000584025 C2orf66Q6UXQ4 117 aa10.05□□□□□ -0.8
ITGB4-210ENST00000584025 CD164L2Q6UWJ8 174 aa10.04□□□□□ -0.8
ITGB4-210ENST00000584025 SMCO4Q9NRQ5 59 aa10.04□□□□□ -0.8
ITGB4-210ENST00000584025 AP5S1Q9NUS5 200 aa10.04□□□□□ -0.8
ITGB4-210ENST00000584025 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
ITGB4-210ENST00000584025 G0S2P27469 103 aa10.03□□□□□ -0.8
ITGB4-210ENST00000584025 CBLN2Q8IUK8 224 aa10.03□□□□□ -0.8
ITGB4-210ENST00000584025 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
ITGB4-210ENST00000584025 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
ITGB4-210ENST00000584025 LRP1BQ9NZR2 4599 aa10.03□□□□□ -0.8
ITGB4-210ENST00000584025 IGLV4-3A0A075B6K6 122 aa10.02□□□□□ -0.81
ITGB4-210ENST00000584025 IFITM10A6NMD0 228 aa10.02□□□□□ -0.81
ITGB4-210ENST00000584025 HIGD2BQ4VC39 106 aa10.02□□□□□ -0.81
ITGB4-210ENST00000584025 FA2HQ7L5A8 372 aa10.02□□□□□ -0.81
ITGB4-210ENST00000584025 TMEM141Q96I45 108 aa10.02□□□□□ -0.81
ITGB4-210ENST00000584025 YPEL4Q96NS1 127 aa10.02□□□□□ -0.81
ITGB4-210ENST00000584025 IGHV1-58A0A0C4DH39 117 aa10□□□□□ -0.81
ITGB4-210ENST00000584025 MALP21145 153 aa10□□□□□ -0.81
ITGB4-210ENST00000584025 Q6ZN92 141 aa10□□□□□ -0.81
ITGB4-210ENST00000584025 COX7A2LO14548 114 aa9.99□□□□□ -0.81
ITGB4-210ENST00000584025 XGP55808 180 aa9.99□□□□□ -0.81
ITGB4-210ENST00000584025 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
ITGB4-210ENST00000584025 FAM30AQ9NZY2 134 aa9.99□□□□□ -0.81
ITGB4-210ENST00000584025 RYR1P21817 5038 aa9.99□□□□□ -0.81
ITGB4-210ENST00000584025 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
ITGB4-210ENST00000584025 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.98□□□□□ -0.81
ITGB4-210ENST00000584025 LINC01546A6NGU7 62 aa9.98□□□□□ -0.81
ITGB4-210ENST00000584025 CNBPP62633 177 aaKnown RBP9.98□□□□□ -0.81
ITGB4-210ENST00000584025 HAMPP81172 84 aa9.98□□□□□ -0.81
ITGB4-210ENST00000584025 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
ITGB4-210ENST00000584025 C9orf163Q8N9P6 203 aa9.98□□□□□ -0.81
ITGB4-210ENST00000584025 C18orf32Q8TCD1 76 aa9.98□□□□□ -0.81
ITGB4-210ENST00000584025 TOMM6Q96B49 74 aa9.98□□□□□ -0.81
ITGB4-210ENST00000584025 C2orf88Q9BSF0 95 aa9.98□□□□□ -0.81
ITGB4-210ENST00000584025 VCX2Q9H322 139 aa9.98□□□□□ -0.81
ITGB4-210ENST00000584025 IGIPA6NJ69 53 aa9.97□□□□□ -0.81
ITGB4-210ENST00000584025 SCGB3A1Q96QR1 104 aa9.97□□□□□ -0.81
ITGB4-210ENST00000584025 SLPIP03973 132 aa9.96□□□□□ -0.82
ITGB4-210ENST00000584025 NPSP0C0P6 89 aa9.96□□□□□ -0.82
ITGB4-210ENST00000584025 PAPPA-AS1Q5QFB9 102 aa9.96□□□□□ -0.82
ITGB4-210ENST00000584025 ZC2HC1BQ5TFG8 222 aa9.96□□□□□ -0.82
ITGB4-210ENST00000584025 TIMM17AQ99595 171 aa9.96□□□□□ -0.82
ITGB4-210ENST00000584025 HERC2O95714 4834 aa9.96□□□□□ -0.82
ITGB4-210ENST00000584025 LINC01549A6NIU2 74 aa9.95□□□□□ -0.82
ITGB4-210ENST00000584025 ZNF561-AS1K7EIQ3 104 aa9.95□□□□□ -0.82
ITGB4-210ENST00000584025 APOMO95445 188 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms