RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 FAM229AH3BQW9 127 aa13.74□□□□□ -0.21
SRSF1-206ENST00000583741 K7EMI3 77 aa13.74□□□□□ -0.21
SRSF1-206ENST00000583741 TCAPO15273 167 aa13.74□□□□□ -0.21
SRSF1-206ENST00000583741 LINC00694P0DN24 101 aa13.74□□□□□ -0.21
SRSF1-206ENST00000583741 ESDP10768 282 aa13.74□□□□□ -0.21
SRSF1-206ENST00000583741 IGHV3-38A0A0C4DH36 116 aa13.73□□□□□ -0.21
SRSF1-206ENST00000583741 K7EP13 123 aa13.73□□□□□ -0.21
SRSF1-206ENST00000583741 DAZ4Q86SG3 579 aaKnown RBP13.73□□□□□ -0.21
SRSF1-206ENST00000583741 DAZ3Q9NR90 486 aaKnown RBP13.73□□□□□ -0.21
SRSF1-206ENST00000583741 FCER1GP30273 86 aa13.72□□□□□ -0.21
SRSF1-206ENST00000583741 LAGE3Q14657 143 aa13.72□□□□□ -0.21
SRSF1-206ENST00000583741 PDZD11Q5EBL8 140 aa13.72□□□□□ -0.21
SRSF1-206ENST00000583741 DEFB104AQ8WTQ1 72 aa13.72□□□□□ -0.21
SRSF1-206ENST00000583741 TSHBP01222 138 aa13.71□□□□□ -0.21
SRSF1-206ENST00000583741 ORMDL2Q53FV1 153 aa13.71□□□□□ -0.21
SRSF1-206ENST00000583741 IGLV5-52A0A0A0MRZ9 124 aa13.7□□□□□ -0.22
SRSF1-206ENST00000583741 COTL1Q14019 142 aa13.7□□□□□ -0.22
SRSF1-206ENST00000583741 HIST3H2BBQ8N257 126 aa13.7□□□□□ -0.22
SRSF1-206ENST00000583741 IGHV1-24A0A0C4DH33 117 aa13.69□□□□□ -0.22
SRSF1-206ENST00000583741 LRCOL1A6NCL2 159 aa13.69□□□□□ -0.22
SRSF1-206ENST00000583741 AMTP48728 403 aa13.69□□□□□ -0.22
SRSF1-206ENST00000583741 PMCHL1Q16048 86 aa13.69□□□□□ -0.22
SRSF1-206ENST00000583741 FAM19A2Q8N3H0 131 aa13.69□□□□□ -0.22
SRSF1-206ENST00000583741 ATP6V0E2Q8NHE4 81 aa13.69□□□□□ -0.22
SRSF1-206ENST00000583741 S100A2P29034 98 aa13.68□□□□□ -0.22
SRSF1-206ENST00000583741 C10orf126Q8N4M7 172 aa13.67□□□□□ -0.22
SRSF1-206ENST00000583741 HBDP02042 147 aa13.67□□□□□ -0.22
SRSF1-206ENST00000583741 SH2D6Q7Z4S9 175 aa13.67□□□□□ -0.22
SRSF1-206ENST00000583741 FAM30AQ9NZY2 134 aa13.67□□□□□ -0.22
SRSF1-206ENST00000583741 J3QL48 77 aa13.66□□□□□ -0.22
SRSF1-206ENST00000583741 NTN5Q8WTR8 489 aaPredicted RBP13.66□□□□□ -0.22
SRSF1-206ENST00000583741 GTSF1LQ9H1H1 148 aa13.66□□□□□ -0.22
SRSF1-206ENST00000583741 A0A096LNJ9 63 aa13.65□□□□□ -0.22
SRSF1-206ENST00000583741 PSCAO43653 123 aa13.65□□□□□ -0.22
SRSF1-206ENST00000583741 TMEM18Q96B42 140 aa13.65□□□□□ -0.22
SRSF1-206ENST00000583741 HMCN2Q8NDA2 5059 aa13.64□□□□□ -0.23
SRSF1-206ENST00000583741 G0S2P27469 103 aa13.64□□□□□ -0.23
SRSF1-206ENST00000583741 TMEM97Q5BJF2 176 aa13.64□□□□□ -0.23
SRSF1-206ENST00000583741 NTM-AS1Q6ZSK4 140 aa13.64□□□□□ -0.23
SRSF1-206ENST00000583741 Q8N814 137 aa13.64□□□□□ -0.23
SRSF1-206ENST00000583741 IFITM10A6NMD0 228 aa13.62□□□□□ -0.23
SRSF1-206ENST00000583741 FABP4P15090 132 aa13.62□□□□□ -0.23
SRSF1-206ENST00000583741 C2orf66Q6UXQ4 117 aa13.62□□□□□ -0.23
SRSF1-206ENST00000583741 HIST1H2BLQ99880 126 aa13.62□□□□□ -0.23
SRSF1-206ENST00000583741 CHCHD7Q9BUK0 85 aa13.62□□□□□ -0.23
SRSF1-206ENST00000583741 LRP1Q07954 4544 aaKnown RBP13.62□□□□□ -0.23
SRSF1-206ENST00000583741 TRBV25-1A0A075B6N4 114 aa13.61□□□□□ -0.23
SRSF1-206ENST00000583741 LINC01556Q5JQF7 62 aa13.61□□□□□ -0.23
SRSF1-206ENST00000583741 C20orf203Q8NBC4 194 aa13.61□□□□□ -0.23
SRSF1-206ENST00000583741 PACRGQ96M98 296 aaPredicted RBP13.61□□□□□ -0.23
SRSF1-206ENST00000583741 CYSLTR1Q9Y271 337 aa13.61□□□□□ -0.23
SRSF1-206ENST00000583741 TRBV6-8A0A0A6YYG3 113 aa13.61□□□□□ -0.23
SRSF1-206ENST00000583741 IBA57-AS1B1ANH7 110 aa13.61□□□□□ -0.23
SRSF1-206ENST00000583741 LEPROTL1O95214 131 aa13.61□□□□□ -0.23
SRSF1-206ENST00000583741 TOMM6Q96B49 74 aa13.61□□□□□ -0.23
SRSF1-206ENST00000583741 Q9HAA7 133 aa13.61□□□□□ -0.23
SRSF1-206ENST00000583741 UBR4Q5T4S7 5183 aa13.6□□□□□ -0.23
SRSF1-206ENST00000583741 TIRAPP58753 221 aa13.6□□□□□ -0.23
SRSF1-206ENST00000583741 RPL39P62891 51 aaKnown RBP13.6□□□□□ -0.23
SRSF1-206ENST00000583741 TMEM243Q9BU79 118 aa13.6□□□□□ -0.23
SRSF1-206ENST00000583741 LINC01549A6NIU2 74 aa13.59□□□□□ -0.23
SRSF1-206ENST00000583741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-206ENST00000583741 IGKV2-29A2NJV5 120 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-206ENST00000583741 HSPB8Q9UJY1 196 aa13.57□□□□□ -0.24
SRSF1-206ENST00000583741 UBE2L6O14933 153 aa13.56□□□□□ -0.24
SRSF1-206ENST00000583741 WFDC2Q14508 124 aa13.56□□□□□ -0.24
SRSF1-206ENST00000583741 SCGB3A1Q96QR1 104 aa13.56□□□□□ -0.24
SRSF1-206ENST00000583741 KRTAP29-1A8MX34 341 aaPredicted RBP13.55□□□□□ -0.24
SRSF1-206ENST00000583741 LINC00173Q6ZV60 143 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 CHCHD5Q9BSY4 110 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 ATP5LO75964 103 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 IGHV3-30P01768 117 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 IGHV3-33P01772 117 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 IGHV3-30-3P0DP02 117 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 IGHV3-30-5P0DP03 117 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 LELP1Q5T871 98 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 Q6ZSA8 131 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 ERASQ7Z444 233 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 LINC00528Q8N1L1 170 aa13.55□□□□□ -0.24
SRSF1-206ENST00000583741 TRAV8-6A0A0B4J262 113 aa13.54□□□□□ -0.24
SRSF1-206ENST00000583741 H7C423 109 aa13.54□□□□□ -0.24
SRSF1-206ENST00000583741 PLA2G1BP04054 148 aaKnown RBP13.54□□□□□ -0.24
SRSF1-206ENST00000583741 IGIPA6NJ69 53 aa13.53□□□□□ -0.24
SRSF1-206ENST00000583741 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.53□□□□□ -0.24
SRSF1-206ENST00000583741 SMAGPQ0VAQ4 97 aa13.53□□□□□ -0.24
SRSF1-206ENST00000583741 OR10D4PQ8NGN7 298 aa13.53□□□□□ -0.24
SRSF1-206ENST00000583741 IFI27L1Q96BM0 104 aa13.53□□□□□ -0.24
SRSF1-206ENST00000583741 TIMM17AQ99595 171 aa13.53□□□□□ -0.24
SRSF1-206ENST00000583741 SPANXA1Q9NS26 97 aa13.53□□□□□ -0.24
SRSF1-206ENST00000583741 UBE2D4Q9Y2X8 147 aa13.53□□□□□ -0.24
SRSF1-206ENST00000583741 LOC105371267A0A1B0GV96 52 aa13.52□□□□□ -0.25
SRSF1-206ENST00000583741 FGF6P10767 208 aa13.52□□□□□ -0.25
SRSF1-206ENST00000583741 GAGE6Q13070 117 aa13.52□□□□□ -0.25
SRSF1-206ENST00000583741 TIMM21Q9BVV7 248 aa13.52□□□□□ -0.25
SRSF1-206ENST00000583741 PYGO1Q9Y3Y4 419 aa13.52□□□□□ -0.25
SRSF1-206ENST00000583741 FAT3Q8TDW7 4589 aa13.51□□□□□ -0.25
SRSF1-206ENST00000583741 AMMECR1LQ6DCA0 310 aa13.51□□□□□ -0.25
SRSF1-206ENST00000583741 MRPL52Q86TS9 123 aaKnown RBP13.51□□□□□ -0.25
SRSF1-206ENST00000583741 Q8N3U1 123 aa13.51□□□□□ -0.25
SRSF1-206ENST00000583741 TMEM141Q96I45 108 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms