RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 TMEM78Q5T7P6 136 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 MIC13Q5XKP0 118 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 RPL7L1Q6DKI1 246 aaKnown RBP1.33□□□□□ -2.2
VAPA-206ENST00000583475 MORN3Q6PF18 240 aaPredicted RBP1.33□□□□□ -2.2
VAPA-206ENST00000583475 DAZ4Q86SG3 579 aaKnown RBP1.33□□□□□ -2.2
VAPA-206ENST00000583475 KCNRGQ8N5I3 272 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 RPP25LQ8N5L8 163 aaKnown RBP1.33□□□□□ -2.2
VAPA-206ENST00000583475 FER1L6-AS1Q8NA97 138 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 OR5C1Q8NGR4 320 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 MBD3L1Q8WWY6 194 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 USMG5Q96IX5 58 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 DNAJC30Q96LL9 226 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 PFDN5Q99471 154 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 TRGV9Q99603 122 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 NPCDR1Q9BY65 106 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 WDR61Q9GZS3 305 aaKnown RBP1.33□□□□□ -2.2
VAPA-206ENST00000583475 RNASE7Q9H1E1 156 aaKnown RBP1.33□□□□□ -2.2
VAPA-206ENST00000583475 DAZ1Q9NQZ3 744 aaKnown RBP1.33□□□□□ -2.2
VAPA-206ENST00000583475 SPANXCQ9NY87 97 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 PAIP2BQ9ULR5 123 aaKnown RBP1.33□□□□□ -2.2
VAPA-206ENST00000583475 RBM7Q9Y580 266 aaKnown RBP1.33□□□□□ -2.2
VAPA-206ENST00000583475 U3KQ87 197 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 ABCA13Q86UQ4 5058 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 HSPG2P98160 4391 aa1.33□□□□□ -2.2
VAPA-206ENST00000583475 TRBV20OR9-2A0A075B6H5 130 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 UBE2L5PA0A1B0GUS4 154 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 HMSDA8MTL9 139 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 GGTLC3B5MD39 225 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 M0R3E3 92 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 COX7A2LO14548 114 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 OVOL1O14753 267 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 GGCTO75223 188 aaKnown RBP1.32□□□□□ -2.2
VAPA-206ENST00000583475 IFNA7P01567 189 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 IFNA17P01571 189 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 SMIM17P0DL12 118 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 PYYP10082 97 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 HIST1H1BP16401 226 aaKnown RBP1.32□□□□□ -2.2
VAPA-206ENST00000583475 NPPCP23582 126 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 LINC00313P59037 77 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 DEFA3P59666 94 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 RPS20P60866 119 aaKnown RBP1.32□□□□□ -2.2
VAPA-206ENST00000583475 CCL20P78556 96 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 DEFA6Q01524 100 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 PLGLAQ15195 96 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 C12orf74Q32Q52 190 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 SPANXN5Q5MJ07 72 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 IBA57Q5T440 356 aaKnown RBP1.32□□□□□ -2.2
VAPA-206ENST00000583475 CYP2G1PQ6ZSU1 146 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 MIR17HGQ75NE6 70 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 C3orf56Q8N813 242 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 OR2T35Q8NGX2 323 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 GNPNAT1Q96EK6 184 aaPredicted RBP1.32□□□□□ -2.2
VAPA-206ENST00000583475 PSMG3Q9BT73 122 aaPredicted RBP1.32□□□□□ -2.2
VAPA-206ENST00000583475 GGACTQ9BVM4 153 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 SND1-IT1Q9HBX3 110 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 RPRMQ9NS64 109 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 FKBP11Q9NYL4 201 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 PSENENQ9NZ42 101 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 ZNF492Q9P255 531 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 FAT1Q14517 4588 aa1.32□□□□□ -2.2
VAPA-206ENST00000583475 TRBV19A0A075B6N1 114 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 TRAV9-1A0A075B6T8 112 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 TRAV2A0A0B4J234 112 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 A0A1W2PRE2 83 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 CEBPZOSA8MTT3 80 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 J3KT08 172 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 CORTO00230 105 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 SNAPC5O75971 98 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 IFNA10P01566 189 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 PRM2P04554 102 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 ZNF705DP0CH99 300 aaPredicted RBP1.31□□□□□ -2.2
VAPA-206ENST00000583475 S100A1P23297 94 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 EIF2B2P49770 351 aaKnown RBP1.31□□□□□ -2.2
VAPA-206ENST00000583475 ZNF80P51504 273 aaPredicted RBP1.31□□□□□ -2.2
VAPA-206ENST00000583475 TAS2R45P59539 299 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 S100A10P60903 97 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 KRTAP13-4Q3LI77 160 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 FAM74A1Q5RGS3 127 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 LYRM7Q5U5X0 104 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 ZFAND6Q6FIF0 208 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 SCXQ7RTU7 201 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 SBSPONQ8IVN8 264 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 ZFAND2AQ8N6M9 145 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 Q8NAQ8 132 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 IGF2BP2-AS1Q96M15 143 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 CIB3Q96Q77 187 aaPredicted RBP1.31□□□□□ -2.2
VAPA-206ENST00000583475 RHPN1-AS1Q9BWJ2 59 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 KRTAP4-1Q9BYQ7 146 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 SMIM3Q9BZL3 60 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 SLC39A9Q9NUM3 307 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 TMEM14CQ9P0S9 112 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 LAMTOR3Q9UHA4 124 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 MRPS16Q9Y3D3 137 aaKnown RBP1.31□□□□□ -2.2
VAPA-206ENST00000583475 TIMM9Q9Y5J7 89 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 R4GN34 69 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 PCLOQ9Y6V0 5065 aa1.31□□□□□ -2.2
VAPA-206ENST00000583475 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
VAPA-206ENST00000583475 PKHD1L1Q86WI1 4243 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 FXYD6-FXYD2A0A087WZ82 144 aa1.3□□□□□ -2.2
VAPA-206ENST00000583475 BORCS7-ASMTA0A0B4J1R7 106 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms