RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 NPYP01303 97 aa8.26□□□□□ -1.09
SMARCE1-218ENST00000582955 PPBPP02775 128 aa8.26□□□□□ -1.09
SMARCE1-218ENST00000582955 ORMDL3Q8N138 153 aa8.26□□□□□ -1.09
SMARCE1-218ENST00000582955 LINC01620Q4KN68 170 aa8.25□□□□□ -1.09
SMARCE1-218ENST00000582955 DGAT2L7PQ6IED9 249 aa8.25□□□□□ -1.09
SMARCE1-218ENST00000582955 TMEM136Q6ZRR5 245 aa8.25□□□□□ -1.09
SMARCE1-218ENST00000582955 PRELID3AQ96N28 172 aa8.25□□□□□ -1.09
SMARCE1-218ENST00000582955 SMIM2Q9BVW6 85 aa8.25□□□□□ -1.09
SMARCE1-218ENST00000582955 CTDSP1Q9GZU7 261 aa8.25□□□□□ -1.09
SMARCE1-218ENST00000582955 GAGE12HA6NDE8 117 aa8.24□□□□□ -1.09
SMARCE1-218ENST00000582955 PHOX2AO14813 284 aa8.24□□□□□ -1.09
SMARCE1-218ENST00000582955 XGP55808 180 aa8.24□□□□□ -1.09
SMARCE1-218ENST00000582955 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-218ENST00000582955 HAMPP81172 84 aa8.24□□□□□ -1.09
SMARCE1-218ENST00000582955 SMAGPQ0VAQ4 97 aa8.24□□□□□ -1.09
SMARCE1-218ENST00000582955 MRPL52Q86TS9 123 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-218ENST00000582955 IMMP2LQ96T52 175 aa8.24□□□□□ -1.09
SMARCE1-218ENST00000582955 TCAPO15273 167 aa8.23□□□□□ -1.09
SMARCE1-218ENST00000582955 PRSS1P07477 247 aa8.23□□□□□ -1.09
SMARCE1-218ENST00000582955 CHCHD10Q8WYQ3 142 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-218ENST00000582955 TMEM18Q96B42 140 aa8.23□□□□□ -1.09
SMARCE1-218ENST00000582955 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1-218ENST00000582955 S100PP25815 95 aa8.22□□□□□ -1.09
SMARCE1-218ENST00000582955 Q8N1X5 172 aa8.22□□□□□ -1.09
SMARCE1-218ENST00000582955 ZNF664Q8N3J9 261 aa8.22□□□□□ -1.09
SMARCE1-218ENST00000582955 CDC42SE2Q9NRR3 84 aa8.22□□□□□ -1.09
SMARCE1-218ENST00000582955 UBE2D4Q9Y2X8 147 aa8.22□□□□□ -1.09
SMARCE1-218ENST00000582955 LOC389332A0A1B0GUA5 103 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 LINC00959A0A1B0GUT2 108 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 hDV102S1A0JD36 115 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 RAB5AP20339 215 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 XCL1P47992 114 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 SS18Q15532 418 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 C10orf91Q5T1B1 145 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 CLRN3Q8NCR9 226 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 KRTAP17-1Q9BYP8 105 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 MAP1LC3AQ9H492 121 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 FAM30AQ9NZY2 134 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 LAMTOR2Q9Y2Q5 125 aa8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 CARHSP1Q9Y2V2 147 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-218ENST00000582955 TRAV9-1A0A075B6T8 112 aa8.2□□□□□ -1.1
SMARCE1-218ENST00000582955 CCL25O15444 150 aa8.2□□□□□ -1.1
SMARCE1-218ENST00000582955 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-218ENST00000582955 RPS10P5Q9NQ39 176 aa8.2□□□□□ -1.1
SMARCE1-218ENST00000582955 CSDC2Q9Y534 153 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-218ENST00000582955 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
SMARCE1-218ENST00000582955 RHEBQ15382 184 aa8.19□□□□□ -1.1
SMARCE1-218ENST00000582955 CFAP161Q6P656 301 aa8.19□□□□□ -1.1
SMARCE1-218ENST00000582955 Q6ZUT4 128 aa8.19□□□□□ -1.1
SMARCE1-218ENST00000582955 TIMM21Q9BVV7 248 aa8.19□□□□□ -1.1
SMARCE1-218ENST00000582955 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
SMARCE1-218ENST00000582955 AP5S1Q9NUS5 200 aa8.19□□□□□ -1.1
SMARCE1-218ENST00000582955 SMR3BP02814 79 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-218ENST00000582955 FOXI1Q12951 378 aa8.18□□□□□ -1.1
SMARCE1-218ENST00000582955 Q6ZSA8 131 aa8.18□□□□□ -1.1
SMARCE1-218ENST00000582955 C15orf56Q8N910 161 aa8.18□□□□□ -1.1
SMARCE1-218ENST00000582955 TRAV13-1A0A0B4J241 112 aa8.17□□□□□ -1.1
SMARCE1-218ENST00000582955 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
SMARCE1-218ENST00000582955 EPM2AB3EWF7 344 aa8.17□□□□□ -1.1
SMARCE1-218ENST00000582955 APOC3P02656 99 aa8.17□□□□□ -1.1
SMARCE1-218ENST00000582955 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
SMARCE1-218ENST00000582955 KIAA1644Q3SXP7 199 aa8.17□□□□□ -1.1
SMARCE1-218ENST00000582955 HIGD2BQ4VC39 106 aa8.17□□□□□ -1.1
SMARCE1-218ENST00000582955 SPANXA1Q9NS26 97 aa8.17□□□□□ -1.1
SMARCE1-218ENST00000582955 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
SMARCE1-218ENST00000582955 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.16□□□□□ -1.1
SMARCE1-218ENST00000582955 PRSS47A8MTI9 375 aa8.16□□□□□ -1.1
SMARCE1-218ENST00000582955 CD164L2Q6UWJ8 174 aa8.16□□□□□ -1.1
SMARCE1-218ENST00000582955 Q8N8P6 123 aa8.16□□□□□ -1.1
SMARCE1-218ENST00000582955 C9orf163Q8N9P6 203 aa8.16□□□□□ -1.1
SMARCE1-218ENST00000582955 C1orf196B1AJZ1 125 aa8.15□□□□□ -1.1
SMARCE1-218ENST00000582955 CNBPP62633 177 aaKnown RBP8.15□□□□□ -1.1
SMARCE1-218ENST00000582955 OPRPNQ99935 248 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1-218ENST00000582955 GNB1LQ9BYB4 327 aa8.15□□□□□ -1.1
SMARCE1-218ENST00000582955 IGHV1-58A0A0C4DH39 117 aa8.14□□□□□ -1.11
SMARCE1-218ENST00000582955 IFI27P40305 119 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1-218ENST00000582955 COX19Q49B96 90 aa8.14□□□□□ -1.11
SMARCE1-218ENST00000582955 Q5VSD8 79 aa8.14□□□□□ -1.11
SMARCE1-218ENST00000582955 SCXQ7RTU7 201 aa8.14□□□□□ -1.11
SMARCE1-218ENST00000582955 NXT2Q9NPJ8 142 aaKnown RBP8.14□□□□□ -1.11
SMARCE1-218ENST00000582955 PCLOQ9Y6V0 5065 aa8.14□□□□□ -1.11
SMARCE1-218ENST00000582955 IGHV3-64A0A075B6Q5 118 aa8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 GVQW2A0A096LPI5 108 aaPredicted RBP8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 IFITM10A6NMD0 228 aa8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 FAM229AH3BQW9 127 aa8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 SNAPINO95295 136 aa8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 SLPIP03973 132 aa8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 MALP21145 153 aa8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 MRPS36P82909 103 aaKnown RBP8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 ORMDL2Q53FV1 153 aa8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 SVBPQ8N300 66 aa8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 CHAC1Q9BUX1 264 aa8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 CYSLTR1Q9Y271 337 aa8.13□□□□□ -1.11
SMARCE1-218ENST00000582955 ABCA13Q86UQ4 5058 aa8.12□□□□□ -1.11
SMARCE1-218ENST00000582955 COX7A2LO14548 114 aa8.12□□□□□ -1.11
SMARCE1-218ENST00000582955 MT-ND6P03923 174 aa8.12□□□□□ -1.11
SMARCE1-218ENST00000582955 C2orf66Q6UXQ4 117 aa8.12□□□□□ -1.11
SMARCE1-218ENST00000582955 MRPL18Q9H0U6 180 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms