RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 YPEL4Q96NS1 127 aa8.06□□□□□ -1.12
SNRPD1-204ENST00000582475 TM2D2Q9BX73 214 aa8.06□□□□□ -1.12
SNRPD1-204ENST00000582475 TRAPPC1Q9Y5R8 145 aa8.06□□□□□ -1.12
SNRPD1-204ENST00000582475 DYNC1H1Q14204 4646 aaKnown RBP8.05□□□□□ -1.12
SNRPD1-204ENST00000582475 CRPP02741 224 aa8.05□□□□□ -1.12
SNRPD1-204ENST00000582475 FGF6P10767 208 aa8.05□□□□□ -1.12
SNRPD1-204ENST00000582475 RAB5AP20339 215 aa8.05□□□□□ -1.12
SNRPD1-204ENST00000582475 CBLN2Q8IUK8 224 aa8.05□□□□□ -1.12
SNRPD1-204ENST00000582475 Q8N8P6 123 aa8.05□□□□□ -1.12
SNRPD1-204ENST00000582475 RMI2Q96E14 147 aa8.05□□□□□ -1.12
SNRPD1-204ENST00000582475 EPPK1P58107 5090 aaKnown RBP8.04□□□□□ -1.12
SNRPD1-204ENST00000582475 PSCAO43653 123 aa8.04□□□□□ -1.12
SNRPD1-204ENST00000582475 TMEM18Q96B42 140 aa8.04□□□□□ -1.12
SNRPD1-204ENST00000582475 TMEM101Q96IK0 257 aa8.04□□□□□ -1.12
SNRPD1-204ENST00000582475 ALKBH7Q9BT30 221 aaPredicted RBP8.04□□□□□ -1.12
SNRPD1-204ENST00000582475 PRR34Q9NV39 138 aa8.04□□□□□ -1.12
SNRPD1-204ENST00000582475 COX11Q9Y6N1 276 aa8.04□□□□□ -1.12
SNRPD1-204ENST00000582475 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
SNRPD1-204ENST00000582475 ZNF25P17030 456 aaPredicted RBP8.03□□□□□ -1.12
SNRPD1-204ENST00000582475 REG3AQ06141 175 aa8.03□□□□□ -1.12
SNRPD1-204ENST00000582475 SMAGPQ0VAQ4 97 aa8.03□□□□□ -1.12
SNRPD1-204ENST00000582475 MIAQ16674 131 aa8.03□□□□□ -1.12
SNRPD1-204ENST00000582475 CLPSL2Q6UWE3 100 aa8.03□□□□□ -1.12
SNRPD1-204ENST00000582475 A0A1B0GVY2 172 aa8.02□□□□□ -1.13
SNRPD1-204ENST00000582475 IFI27P40305 119 aaPredicted RBP8.02□□□□□ -1.13
SNRPD1-204ENST00000582475 LCE1DQ5T752 114 aa8.02□□□□□ -1.13
SNRPD1-204ENST00000582475 DGAT2L7PQ6IED9 249 aa8.02□□□□□ -1.13
SNRPD1-204ENST00000582475 MRPL52Q86TS9 123 aaKnown RBP8.02□□□□□ -1.13
SNRPD1-204ENST00000582475 OR5A1Q8NGJ0 315 aa8.02□□□□□ -1.13
SNRPD1-204ENST00000582475 NXT2Q9NPJ8 142 aaKnown RBP8.02□□□□□ -1.13
SNRPD1-204ENST00000582475 PKD1P98161 4303 aa8.01□□□□□ -1.13
SNRPD1-204ENST00000582475 DNAH5Q8TE73 4624 aa8.01□□□□□ -1.13
SNRPD1-204ENST00000582475 PRSS3P2Q8NHM4 247 aa8.01□□□□□ -1.13
SNRPD1-204ENST00000582475 C1orf43Q9BWL3 253 aa8.01□□□□□ -1.13
SNRPD1-204ENST00000582475 CDC42SE2Q9NRR3 84 aa8.01□□□□□ -1.13
SNRPD1-204ENST00000582475 UBE2D4Q9Y2X8 147 aa8.01□□□□□ -1.13
SNRPD1-204ENST00000582475 CSDC2Q9Y534 153 aaKnown RBP8.01□□□□□ -1.13
SNRPD1-204ENST00000582475 A0A087WTM6 91 aa8□□□□□ -1.13
SNRPD1-204ENST00000582475 TRAV8-4A0A0B4J246 113 aa8□□□□□ -1.13
SNRPD1-204ENST00000582475 IGKV3OR2-268A0A0C4DH90 116 aa8□□□□□ -1.13
SNRPD1-204ENST00000582475 K7EMI3 77 aa8□□□□□ -1.13
SNRPD1-204ENST00000582475 RPL39P62891 51 aaKnown RBP8□□□□□ -1.13
SNRPD1-204ENST00000582475 ORMDL2Q53FV1 153 aa8□□□□□ -1.13
SNRPD1-204ENST00000582475 ZNF664Q8N3J9 261 aa8□□□□□ -1.13
SNRPD1-204ENST00000582475 MAPKAPK5-AS1Q8N8E1 139 aa8□□□□□ -1.13
SNRPD1-204ENST00000582475 TIMM21Q9BVV7 248 aa8□□□□□ -1.13
SNRPD1-204ENST00000582475 LRCOL1A6NCL2 159 aa7.99□□□□□ -1.13
SNRPD1-204ENST00000582475 BAALCQ8WXS3 180 aa7.99□□□□□ -1.13
SNRPD1-204ENST00000582475 IGLV10-54A0A075B6I4 117 aa7.98□□□□□ -1.13
SNRPD1-204ENST00000582475 COLCA2A8K830 154 aa7.98□□□□□ -1.13
SNRPD1-204ENST00000582475 SCO1O75880 301 aa7.98□□□□□ -1.13
SNRPD1-204ENST00000582475 KRTAP26-1Q6PEX3 210 aa7.98□□□□□ -1.13
SNRPD1-204ENST00000582475 BIRC6Q9NR09 4857 aa7.98□□□□□ -1.13
SNRPD1-204ENST00000582475 G0S2P27469 103 aa7.97□□□□□ -1.13
SNRPD1-204ENST00000582475 C2orf66Q6UXQ4 117 aa7.97□□□□□ -1.13
SNRPD1-204ENST00000582475 FA2HQ7L5A8 372 aa7.97□□□□□ -1.13
SNRPD1-204ENST00000582475 SPANXA1Q9NS26 97 aa7.97□□□□□ -1.13
SNRPD1-204ENST00000582475 LRP1BQ9NZR2 4599 aa7.96□□□□□ -1.13
SNRPD1-204ENST00000582475 LINC00959A0A1B0GUT2 108 aa7.96□□□□□ -1.14
SNRPD1-204ENST00000582475 LINC01546A6NGU7 62 aa7.96□□□□□ -1.14
SNRPD1-204ENST00000582475 TRGC2P03986 189 aa7.96□□□□□ -1.14
SNRPD1-204ENST00000582475 RNASE13Q5GAN3 156 aaKnown RBP7.96□□□□□ -1.14
SNRPD1-204ENST00000582475 SPATA12Q7Z6I5 190 aa7.96□□□□□ -1.14
SNRPD1-204ENST00000582475 C18orf32Q8TCD1 76 aa7.96□□□□□ -1.14
SNRPD1-204ENST00000582475 OPRPNQ99935 248 aaPredicted RBP7.96□□□□□ -1.14
SNRPD1-204ENST00000582475 CYSLTR1Q9Y271 337 aa7.96□□□□□ -1.14
SNRPD1-204ENST00000582475 PYGO1Q9Y3Y4 419 aa7.96□□□□□ -1.14
SNRPD1-204ENST00000582475 GAGE12HA6NDE8 117 aa7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 LECT2O14960 151 aa7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 LINC00614P0C842 121 aa7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 S100A1P23297 94 aa7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 KRTAP10-2P60368 255 aa7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 MRPS36P82909 103 aaKnown RBP7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 WFDC2Q14508 124 aa7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 SS18Q15532 418 aa7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 Q6ZUT4 128 aa7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 CHCHD10Q8WYQ3 142 aaPredicted RBP7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 FAM104AQ969W3 186 aa7.95□□□□□ -1.14
SNRPD1-204ENST00000582475 RAB5BP61020 215 aa7.94□□□□□ -1.14
SNRPD1-204ENST00000582475 Q8N814 137 aa7.94□□□□□ -1.14
SNRPD1-204ENST00000582475 TOMM6Q96B49 74 aa7.94□□□□□ -1.14
SNRPD1-204ENST00000582475 HECTD4Q9Y4D8 3996 aa7.94□□□□□ -1.14
SNRPD1-204ENST00000582475 IGLV4-3A0A075B6K6 122 aa7.93□□□□□ -1.14
SNRPD1-204ENST00000582475 TRAV13-1A0A0B4J241 112 aa7.93□□□□□ -1.14
SNRPD1-204ENST00000582475 IGIPA6NJ69 53 aa7.93□□□□□ -1.14
SNRPD1-204ENST00000582475 C1orf196B1AJZ1 125 aa7.93□□□□□ -1.14
SNRPD1-204ENST00000582475 CCL25O15444 150 aa7.93□□□□□ -1.14
SNRPD1-204ENST00000582475 FUSP35637 526 aaKnown RBP eCLIP7.93□□□□□ -1.14
SNRPD1-204ENST00000582475 URB1-AS1Q96HZ7 61 aa7.93□□□□□ -1.14
SNRPD1-204ENST00000582475 AP5S1Q9NUS5 200 aa7.93□□□□□ -1.14
SNRPD1-204ENST00000582475 USP17L23D6RBM5 183 aa7.92□□□□□ -1.14
SNRPD1-204ENST00000582475 ATP6V1G1O75348 118 aa7.92□□□□□ -1.14
SNRPD1-204ENST00000582475 XCL1P47992 114 aa7.92□□□□□ -1.14
SNRPD1-204ENST00000582475 TMEM141Q96I45 108 aa7.92□□□□□ -1.14
SNRPD1-204ENST00000582475 SCGB3A1Q96QR1 104 aa7.92□□□□□ -1.14
SNRPD1-204ENST00000582475 KRTAP4-7Q9BYR0 210 aa7.92□□□□□ -1.14
SNRPD1-204ENST00000582475 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
SNRPD1-204ENST00000582475 DNAH8Q96JB1 4490 aa7.91□□□□□ -1.14
SNRPD1-204ENST00000582475 LINC01549A6NIU2 74 aa7.91□□□□□ -1.14
SNRPD1-204ENST00000582475 C16orf90A8MZG2 172 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms