RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 TRGC1P0CF51 173 aa3.66□□□□□ -1.82
TVP23B-210ENST00000582288 IGLC6P0CF74 106 aa3.66□□□□□ -1.82
TVP23B-210ENST00000582288 ZNF726P1Q15940 193 aa3.66□□□□□ -1.82
TVP23B-210ENST00000582288 STOML3Q8TAV4 291 aa3.66□□□□□ -1.82
TVP23B-210ENST00000582288 TMEM101Q96IK0 257 aa3.66□□□□□ -1.82
TVP23B-210ENST00000582288 BTF3L4Q96K17 158 aa3.66□□□□□ -1.82
TVP23B-210ENST00000582288 CAMK2N2Q96S95 79 aa3.66□□□□□ -1.82
TVP23B-210ENST00000582288 BCL2L11O43521 198 aa3.65□□□□□ -1.83
TVP23B-210ENST00000582288 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.83
TVP23B-210ENST00000582288 AKR1C3P42330 323 aa3.65□□□□□ -1.83
TVP23B-210ENST00000582288 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
TVP23B-210ENST00000582288 RPS20P60866 119 aaKnown RBP3.65□□□□□ -1.83
TVP23B-210ENST00000582288 RPL18AQ02543 176 aaKnown RBP3.65□□□□□ -1.83
TVP23B-210ENST00000582288 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.83
TVP23B-210ENST00000582288 IMMP2LQ96T52 175 aa3.65□□□□□ -1.83
TVP23B-210ENST00000582288 MRPL35Q9NZE8 188 aaKnown RBP3.65□□□□□ -1.83
TVP23B-210ENST00000582288 C1orf196B1AJZ1 125 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 G3V3Q6 166 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 COX7A2LO14548 114 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 ZNF861PO60384 105 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 APCSP02743 223 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 CRYGAP11844 174 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 MALP21145 153 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 SSTP61278 116 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 TEX261Q6UWH6 196 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 Q6ZNX1 250 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 MRPL52Q86TS9 123 aaKnown RBP3.64□□□□□ -1.83
TVP23B-210ENST00000582288 BAGE2Q86Y30 109 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 CDC42SE2Q9NRR3 84 aa3.64□□□□□ -1.83
TVP23B-210ENST00000582288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.63□□□□□ -1.83
TVP23B-210ENST00000582288 IGKV2-29A2NJV5 120 aaPredicted RBP3.63□□□□□ -1.83
TVP23B-210ENST00000582288 TMEM241Q24JQ0 296 aa3.63□□□□□ -1.83
TVP23B-210ENST00000582288 CST9LP1Q5W188 147 aa3.63□□□□□ -1.83
TVP23B-210ENST00000582288 LINC00299Q6ZSB3 139 aa3.63□□□□□ -1.83
TVP23B-210ENST00000582288 OR2D3Q8NGH3 330 aa3.63□□□□□ -1.83
TVP23B-210ENST00000582288 OR10D4PQ8NGN7 298 aa3.63□□□□□ -1.83
TVP23B-210ENST00000582288 TYMSOSQ8TAI1 123 aa3.63□□□□□ -1.83
TVP23B-210ENST00000582288 ENKURQ8TC29 256 aa3.63□□□□□ -1.83
TVP23B-210ENST00000582288 MARVELD1Q9BSK0 173 aa3.63□□□□□ -1.83
TVP23B-210ENST00000582288 IGLV7-46A0A075B6I9 117 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 BORCS7-ASMTA0A0B4J1R7 106 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 XKRY2A2RUG3 117 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 MAP1LC3B2A6NCE7 125 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 INMT-MINDY4F8WBC2 141 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 I3L3M4 83 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 SSNA1O43805 119 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 NUPR1O60356 82 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 ASB16-AS1Q495Z4 193 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 C9orf62Q8N4C0 152 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 GATD1Q8NB37 220 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 SMIM12Q96EX1 92 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 OPRPNQ99935 248 aaPredicted RBP3.62□□□□□ -1.83
TVP23B-210ENST00000582288 CNFNQ9BYD5 112 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 MAP1LC3BQ9GZQ8 125 aa3.62□□□□□ -1.83
TVP23B-210ENST00000582288 CSDC2Q9Y534 153 aaKnown RBP3.62□□□□□ -1.83
TVP23B-210ENST00000582288 A0A087X002 238 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 TRBV6-5A0A0K0K1A5 114 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 FAM168BA1KXE4 195 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 M0QXV9 152 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 DEFA3P59666 94 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 UBE2BP63146 152 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 SMAGPQ0VAQ4 97 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 AKR1C8PQ5T2L2 129 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 LINC00173Q6ZV60 143 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 TMUB2Q71RG4 321 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 KRTAP7-1Q8IUC3 87 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 MRAP2Q96G30 205 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 TPPP3Q9BW30 176 aa3.61□□□□□ -1.83
TVP23B-210ENST00000582288 SDHAF1A6NFY7 115 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 NDUFA1O15239 70 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 PAGE4O60829 102 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 PFDN1O60925 122 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 TSHBP01222 138 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 CFC1BP0CG36 223 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 PMCHP20382 165 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 CTRLP40313 264 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 SPAG11BQ08648 103 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 FAM229BQ4G0N7 80 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 LYZL1Q6UWQ5 148 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 FAM19A5Q7Z5A7 132 aaPredicted RBP3.6□□□□□ -1.83
TVP23B-210ENST00000582288 SMDT1Q9H4I9 107 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 CYTL1Q9NRR1 136 aa3.6□□□□□ -1.83
TVP23B-210ENST00000582288 IFNA1P01562 189 aa3.59□□□□□ -1.83
TVP23B-210ENST00000582288 RPL35P42766 123 aaKnown RBP3.59□□□□□ -1.83
TVP23B-210ENST00000582288 RPL28P46779 137 aaKnown RBP3.59□□□□□ -1.83
TVP23B-210ENST00000582288 TWIST1Q15672 202 aa3.59□□□□□ -1.83
TVP23B-210ENST00000582288 RPL7L1Q6DKI1 246 aaKnown RBP3.59□□□□□ -1.83
TVP23B-210ENST00000582288 FP248Q71RG6 208 aaPredicted RBP3.59□□□□□ -1.83
TVP23B-210ENST00000582288 LINC00304Q8N9R0 145 aa3.59□□□□□ -1.83
TVP23B-210ENST00000582288 RPL39LQ96EH5 51 aaKnown RBP3.59□□□□□ -1.83
TVP23B-210ENST00000582288 RETNLBQ9BQ08 111 aa3.59□□□□□ -1.83
TVP23B-210ENST00000582288 PPDPFQ9H3Y8 114 aa3.59□□□□□ -1.83
TVP23B-210ENST00000582288 TRBV27A0A0K0K1C4 114 aa3.58□□□□□ -1.84
TVP23B-210ENST00000582288 SEC61BP60468 96 aaKnown RBP3.58□□□□□ -1.84
TVP23B-210ENST00000582288 LBHQ53QV2 105 aaPredicted RBP3.58□□□□□ -1.84
TVP23B-210ENST00000582288 LINC00242Q5T6M2 205 aa3.58□□□□□ -1.84
TVP23B-210ENST00000582288 SMIM15Q7Z3B0 74 aa3.58□□□□□ -1.84
TVP23B-210ENST00000582288 MBD3L1Q8WWY6 194 aa3.58□□□□□ -1.84
TVP23B-210ENST00000582288 S100ZQ8WXG8 99 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms