RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 ADIRFQ15847 76 aa6.29□□□□□ -1.4
TOP3A-211ENST00000581536 FAM74A3Q4VXF1 159 aa6.29□□□□□ -1.4
TOP3A-211ENST00000581536 AMN1Q8IY45 258 aa6.29□□□□□ -1.4
TOP3A-211ENST00000581536 TMEM191AQ9H0A3 160 aa6.29□□□□□ -1.4
TOP3A-211ENST00000581536 NAT8Q9UHE5 227 aa6.29□□□□□ -1.4
TOP3A-211ENST00000581536 BORCS7Q96B45 105 aa6.28□□□□□ -1.4
TOP3A-211ENST00000581536 TRBV6-5A0A0K0K1A5 114 aa6.27□□□□□ -1.41
TOP3A-211ENST00000581536 I3L3M4 83 aa6.27□□□□□ -1.41
TOP3A-211ENST00000581536 NCR2O95944 276 aa6.27□□□□□ -1.41
TOP3A-211ENST00000581536 TSHBP01222 138 aa6.27□□□□□ -1.41
TOP3A-211ENST00000581536 SLPIP03973 132 aa6.27□□□□□ -1.41
TOP3A-211ENST00000581536 POLR2KP53803 58 aaKnown RBP6.27□□□□□ -1.41
TOP3A-211ENST00000581536 RIGQ13278 110 aa6.27□□□□□ -1.41
TOP3A-211ENST00000581536 SCXQ7RTU7 201 aa6.27□□□□□ -1.41
TOP3A-211ENST00000581536 KRTAP4-11Q9BYQ6 195 aa6.27□□□□□ -1.41
TOP3A-211ENST00000581536 ST20Q9HBF5 79 aa6.27□□□□□ -1.41
TOP3A-211ENST00000581536 MYCBP2O75592 4640 aa6.27□□□□□ -1.41
TOP3A-211ENST00000581536 TRAV8-4A0A0B4J246 113 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 SMIM27A0A1W2PRY6 76 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 GAGE12HA6NDE8 117 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 APCSP02743 223 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 FGF6P10767 208 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 ESDP10768 282 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 IFITM2Q01629 132 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 C14orf177Q52M58 125 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 RNASEKQ6P5S7 137 aaKnown RBP6.26□□□□□ -1.41
TOP3A-211ENST00000581536 CIRBP-AS1Q8TBR5 109 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 TMEM242Q9NWH2 141 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 HERC1Q15751 4861 aa6.26□□□□□ -1.41
TOP3A-211ENST00000581536 PANO1I0J062 215 aa6.25□□□□□ -1.41
TOP3A-211ENST00000581536 CAMPP49913 170 aa6.25□□□□□ -1.41
TOP3A-211ENST00000581536 MRPL51Q4U2R6 128 aaKnown RBP6.25□□□□□ -1.41
TOP3A-211ENST00000581536 AMMECR1LQ6DCA0 310 aa6.25□□□□□ -1.41
TOP3A-211ENST00000581536 DGAT2L7PQ6IED9 249 aa6.25□□□□□ -1.41
TOP3A-211ENST00000581536 SLC7A5P1Q8MH63 180 aa6.25□□□□□ -1.41
TOP3A-211ENST00000581536 NRACQ8N912 160 aa6.25□□□□□ -1.41
TOP3A-211ENST00000581536 C9orf163Q8N9P6 203 aa6.25□□□□□ -1.41
TOP3A-211ENST00000581536 CHAC1Q9BUX1 264 aa6.25□□□□□ -1.41
TOP3A-211ENST00000581536 NAT8BQ9UHF3 227 aa6.25□□□□□ -1.41
TOP3A-211ENST00000581536 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
TOP3A-211ENST00000581536 hDV102S1A0JD36 115 aa6.24□□□□□ -1.41
TOP3A-211ENST00000581536 FAM104BQ5XKR9 115 aa6.24□□□□□ -1.41
TOP3A-211ENST00000581536 MRPL54Q6P161 138 aaKnown RBP6.24□□□□□ -1.41
TOP3A-211ENST00000581536 MRAP2Q96G30 205 aa6.24□□□□□ -1.41
TOP3A-211ENST00000581536 SMDT1Q9H4I9 107 aa6.24□□□□□ -1.41
TOP3A-211ENST00000581536 TRBV27A0A0K0K1C4 114 aa6.23□□□□□ -1.41
TOP3A-211ENST00000581536 H7C423 109 aa6.23□□□□□ -1.41
TOP3A-211ENST00000581536 VCYO14598 125 aa6.23□□□□□ -1.41
TOP3A-211ENST00000581536 ODF1Q14990 250 aa6.23□□□□□ -1.41
TOP3A-211ENST00000581536 SDIM1Q6ZPB5 146 aa6.23□□□□□ -1.41
TOP3A-211ENST00000581536 CHCHD10Q8WYQ3 142 aaPredicted RBP6.23□□□□□ -1.41
TOP3A-211ENST00000581536 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
TOP3A-211ENST00000581536 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
TOP3A-211ENST00000581536 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
TOP3A-211ENST00000581536 C15orf56Q8N910 161 aa6.22□□□□□ -1.41
TOP3A-211ENST00000581536 OR5A1Q8NGJ0 315 aa6.22□□□□□ -1.41
TOP3A-211ENST00000581536 CDC42SE2Q9NRR3 84 aa6.22□□□□□ -1.41
TOP3A-211ENST00000581536 LRP1Q07954 4544 aaKnown RBP6.22□□□□□ -1.41
TOP3A-211ENST00000581536 LINC00959A0A1B0GUT2 108 aa6.21□□□□□ -1.42
TOP3A-211ENST00000581536 CKS2P33552 79 aa6.21□□□□□ -1.42
TOP3A-211ENST00000581536 PTTG1IPP53801 180 aa6.21□□□□□ -1.42
TOP3A-211ENST00000581536 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
TOP3A-211ENST00000581536 FOXI1Q12951 378 aa6.21□□□□□ -1.42
TOP3A-211ENST00000581536 HIGD2BQ4VC39 106 aa6.21□□□□□ -1.42
TOP3A-211ENST00000581536 RNASE13Q5GAN3 156 aaKnown RBP6.21□□□□□ -1.42
TOP3A-211ENST00000581536 LINC00526Q96FQ7 95 aa6.21□□□□□ -1.42
TOP3A-211ENST00000581536 A0A1B0GXF2 115 aa6.2□□□□□ -1.42
TOP3A-211ENST00000581536 CCL25O15444 150 aa6.2□□□□□ -1.42
TOP3A-211ENST00000581536 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
TOP3A-211ENST00000581536 XCL1P47992 114 aa6.2□□□□□ -1.42
TOP3A-211ENST00000581536 CNBPP62633 177 aaKnown RBP6.2□□□□□ -1.42
TOP3A-211ENST00000581536 ZNF664Q8N3J9 261 aa6.2□□□□□ -1.42
TOP3A-211ENST00000581536 TMEM101Q96IK0 257 aa6.2□□□□□ -1.42
TOP3A-211ENST00000581536 BTF3L4Q96K17 158 aa6.2□□□□□ -1.42
TOP3A-211ENST00000581536 TRBV24-1A0A075B6N3 115 aa6.19□□□□□ -1.42
TOP3A-211ENST00000581536 C7orf77A4D0Y5 90 aa6.19□□□□□ -1.42
TOP3A-211ENST00000581536 D6R8Y8 96 aa6.19□□□□□ -1.42
TOP3A-211ENST00000581536 TNFRSF6BO95407 300 aa6.19□□□□□ -1.42
TOP3A-211ENST00000581536 NPYP01303 97 aa6.19□□□□□ -1.42
TOP3A-211ENST00000581536 ZNF25P17030 456 aaPredicted RBP6.19□□□□□ -1.42
TOP3A-211ENST00000581536 FCER1GP30273 86 aa6.19□□□□□ -1.42
TOP3A-211ENST00000581536 RAB14P61106 215 aa6.19□□□□□ -1.42
TOP3A-211ENST00000581536 MRPL52Q86TS9 123 aaKnown RBP6.19□□□□□ -1.42
TOP3A-211ENST00000581536 A0A1B0GW15 77 aa6.18□□□□□ -1.42
TOP3A-211ENST00000581536 LINC00862A6NCI5 91 aa6.18□□□□□ -1.42
TOP3A-211ENST00000581536 TCAPO15273 167 aa6.18□□□□□ -1.42
TOP3A-211ENST00000581536 PPP1R17O96001 155 aa6.18□□□□□ -1.42
TOP3A-211ENST00000581536 RPL39P62891 51 aaKnown RBP6.18□□□□□ -1.42
TOP3A-211ENST00000581536 HBBP68871 147 aa6.18□□□□□ -1.42
TOP3A-211ENST00000581536 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
TOP3A-211ENST00000581536 PRSS3P2Q8NHM4 247 aa6.18□□□□□ -1.42
TOP3A-211ENST00000581536 FAM104AQ969W3 186 aa6.18□□□□□ -1.42
TOP3A-211ENST00000581536 DPH3Q96FX2 82 aa6.18□□□□□ -1.42
TOP3A-211ENST00000581536 OPRPNQ99935 248 aaPredicted RBP6.18□□□□□ -1.42
TOP3A-211ENST00000581536 UBE2D4Q9Y2X8 147 aa6.18□□□□□ -1.42
TOP3A-211ENST00000581536 IGHV3-64A0A075B6Q5 118 aa6.17□□□□□ -1.42
TOP3A-211ENST00000581536 PPP1R2P9O14990 202 aa6.17□□□□□ -1.42
TOP3A-211ENST00000581536 COX6A2Q02221 97 aa6.17□□□□□ -1.42
TOP3A-211ENST00000581536 SS18Q15532 418 aa6.17□□□□□ -1.42
TOP3A-211ENST00000581536 CLLU1Q5K131 121 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms